Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21050 and ABID97_RS21055 are separated by 107 nucleotides ABID97_RS21055 and ABID97_RS21060 overlap by 4 nucleotides ABID97_RS21060 and ABID97_RS21065 are separated by 653 nucleotides
ABID97_RS21050: ABID97_RS21050 - universal stress protein, at 4,346,436 to 4,346,876
_RS21050
ABID97_RS21055: ABID97_RS21055 - 2OG-Fe dioxygenase family protein, at 4,346,984 to 4,347,733
_RS21055
ABID97_RS21060: ABID97_RS21060 - DUF427 domain-containing protein, at 4,347,730 to 4,348,014
_RS21060
ABID97_RS21065: ABID97_RS21065 - L-histidine N(alpha)-methyltransferase, at 4,348,668 to 4,349,678
_RS21065
Position (kb) 4347
4348
4349 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 4346.752 kb on + strand, within ABID97_RS21050 at 4346.753 kb on - strand, within ABID97_RS21050 at 4346.891 kb on + strand at 4346.939 kb on + strand at 4346.965 kb on - strand at 4347.028 kb on + strand at 4347.450 kb on + strand, within ABID97_RS21055 at 4347.451 kb on - strand, within ABID97_RS21055 at 4347.451 kb on - strand, within ABID97_RS21055 at 4347.558 kb on + strand, within ABID97_RS21055 at 4347.558 kb on + strand, within ABID97_RS21055 at 4347.660 kb on + strand at 4347.810 kb on - strand, within ABID97_RS21060 at 4347.812 kb on + strand, within ABID97_RS21060 at 4347.857 kb on + strand, within ABID97_RS21060 at 4347.857 kb on + strand, within ABID97_RS21060 at 4347.858 kb on - strand, within ABID97_RS21060 at 4347.860 kb on + strand, within ABID97_RS21060 at 4347.860 kb on + strand, within ABID97_RS21060 at 4347.861 kb on - strand, within ABID97_RS21060 at 4347.861 kb on - strand, within ABID97_RS21060 at 4347.861 kb on - strand, within ABID97_RS21060 at 4347.861 kb on - strand, within ABID97_RS21060 at 4347.944 kb on + strand, within ABID97_RS21060 at 4347.944 kb on + strand, within ABID97_RS21060 at 4347.944 kb on + strand, within ABID97_RS21060 at 4347.945 kb on - strand, within ABID97_RS21060 at 4348.039 kb on + strand at 4348.039 kb on + strand at 4348.062 kb on + strand at 4348.370 kb on + strand at 4348.371 kb on - strand at 4348.371 kb on - strand at 4348.664 kb on + strand at 4348.664 kb on + strand at 4348.786 kb on + strand, within ABID97_RS21065 at 4348.787 kb on - strand, within ABID97_RS21065 at 4348.900 kb on + strand, within ABID97_RS21065 at 4348.900 kb on + strand, within ABID97_RS21065 at 4348.901 kb on - strand, within ABID97_RS21065 at 4348.901 kb on - strand, within ABID97_RS21065 at 4348.901 kb on - strand, within ABID97_RS21065 at 4349.011 kb on + strand, within ABID97_RS21065 at 4349.012 kb on - strand, within ABID97_RS21065 at 4349.012 kb on - strand, within ABID97_RS21065
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 4,346,752 + ABID97_RS21050 0.72 -0.3 4,346,753 - ABID97_RS21050 0.72 +0.2 4,346,891 + -0.3 4,346,939 + +0.1 4,346,965 - +0.1 4,347,028 + -2.1 4,347,450 + ABID97_RS21055 0.62 -3.5 4,347,451 - ABID97_RS21055 0.62 -1.1 4,347,451 - ABID97_RS21055 0.62 -1.8 4,347,558 + ABID97_RS21055 0.77 -0.5 4,347,558 + ABID97_RS21055 0.77 -3.3 4,347,660 + -3.7 4,347,810 - ABID97_RS21060 0.28 -0.4 4,347,812 + ABID97_RS21060 0.29 -2.6 4,347,857 + ABID97_RS21060 0.45 -4.4 4,347,857 + ABID97_RS21060 0.45 +0.5 4,347,858 - ABID97_RS21060 0.45 -2.2 4,347,860 + ABID97_RS21060 0.46 -2.0 4,347,860 + ABID97_RS21060 0.46 -1.7 4,347,861 - ABID97_RS21060 0.46 -3.9 4,347,861 - ABID97_RS21060 0.46 -1.7 4,347,861 - ABID97_RS21060 0.46 -2.9 4,347,861 - ABID97_RS21060 0.46 -2.1 4,347,944 + ABID97_RS21060 0.75 -0.8 4,347,944 + ABID97_RS21060 0.75 -1.2 4,347,944 + ABID97_RS21060 0.75 -3.0 4,347,945 - ABID97_RS21060 0.75 -1.7 4,348,039 + +0.0 4,348,039 + -0.0 4,348,062 + -0.3 4,348,370 + -0.2 4,348,371 - +0.8 4,348,371 - +1.6 4,348,664 + -0.6 4,348,664 + -0.4 4,348,786 + ABID97_RS21065 0.12 -1.4 4,348,787 - ABID97_RS21065 0.12 -0.4 4,348,900 + ABID97_RS21065 0.23 +0.6 4,348,900 + ABID97_RS21065 0.23 -1.8 4,348,901 - ABID97_RS21065 0.23 -1.2 4,348,901 - ABID97_RS21065 0.23 +0.4 4,348,901 - ABID97_RS21065 0.23 -1.1 4,349,011 + ABID97_RS21065 0.34 -0.8 4,349,012 - ABID97_RS21065 0.34 -0.0 4,349,012 - ABID97_RS21065 0.34 +0.3
Or see this region's nucleotide sequence