Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20735 and ABID97_RS20740 overlap by 1 nucleotides ABID97_RS20740 and ABID97_RS20745 overlap by 4 nucleotides
ABID97_RS20735: ABID97_RS20735 - inositol monophosphatase family protein, at 4,281,964 to 4,283,025
_RS20735
ABID97_RS20740: ABID97_RS20740 - FUSC family membrane protein, at 4,283,025 to 4,285,268
_RS20740
ABID97_RS20745: ABID97_RS20745 - mechanosensitive ion channel domain-containing protein, at 4,285,265 to 4,286,359
_RS20745
Position (kb) 4283
4284
4285
4286 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 4283.499 kb on + strand, within ABID97_RS20740 at 4283.499 kb on + strand, within ABID97_RS20740 at 4283.500 kb on - strand, within ABID97_RS20740 at 4283.500 kb on - strand, within ABID97_RS20740 at 4283.500 kb on - strand, within ABID97_RS20740 at 4283.500 kb on - strand, within ABID97_RS20740 at 4283.500 kb on - strand, within ABID97_RS20740 at 4283.574 kb on + strand, within ABID97_RS20740 at 4284.276 kb on + strand, within ABID97_RS20740 at 4284.277 kb on - strand, within ABID97_RS20740 at 4284.316 kb on - strand, within ABID97_RS20740 at 4284.517 kb on - strand, within ABID97_RS20740 at 4284.657 kb on + strand, within ABID97_RS20740 at 4284.657 kb on + strand, within ABID97_RS20740 at 4284.657 kb on + strand, within ABID97_RS20740 at 4284.658 kb on - strand, within ABID97_RS20740 at 4284.658 kb on - strand, within ABID97_RS20740 at 4286.040 kb on - strand, within ABID97_RS20745 at 4286.040 kb on - strand, within ABID97_RS20745 at 4286.040 kb on - strand, within ABID97_RS20745
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 4,283,499 + ABID97_RS20740 0.21 -1.4 4,283,499 + ABID97_RS20740 0.21 -0.9 4,283,500 - ABID97_RS20740 0.21 -4.5 4,283,500 - ABID97_RS20740 0.21 -4.7 4,283,500 - ABID97_RS20740 0.21 -0.7 4,283,500 - ABID97_RS20740 0.21 -4.0 4,283,500 - ABID97_RS20740 0.21 -3.5 4,283,574 + ABID97_RS20740 0.24 -3.0 4,284,276 + ABID97_RS20740 0.56 -3.3 4,284,277 - ABID97_RS20740 0.56 -4.7 4,284,316 - ABID97_RS20740 0.58 -1.7 4,284,517 - ABID97_RS20740 0.66 -4.8 4,284,657 + ABID97_RS20740 0.73 -2.9 4,284,657 + ABID97_RS20740 0.73 -0.5 4,284,657 + ABID97_RS20740 0.73 -2.0 4,284,658 - ABID97_RS20740 0.73 -4.0 4,284,658 - ABID97_RS20740 0.73 -3.1 4,286,040 - ABID97_RS20745 0.71 +0.1 4,286,040 - ABID97_RS20745 0.71 -0.1 4,286,040 - ABID97_RS20745 0.71 +0.8
Or see this region's nucleotide sequence