Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS14885 and ABID97_RS14890 are separated by 103 nucleotides ABID97_RS14890 and ABID97_RS14895 are separated by 45 nucleotides ABID97_RS14895 and ABID97_RS14900 are separated by 183 nucleotides
ABID97_RS14885: ABID97_RS14885 - acetolactate synthase 3 catalytic subunit, at 3,091,047 to 3,092,831
_RS14885
ABID97_RS14890: ABID97_RS14890 - acetolactate synthase small subunit, at 3,092,935 to 3,093,426
_RS14890
ABID97_RS14895: ABID97_RS14895 - ketol-acid reductoisomerase, at 3,093,472 to 3,094,488
_RS14895
ABID97_RS14900: ABID97_RS14900 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 3,094,672 to 3,095,496
_RS14900
Position (kb)
3093
3094
3095 Strain fitness (log2 ratio)
-2
-1
0
1 at 3092.868 kb on + strand at 3092.869 kb on - strand at 3093.017 kb on - strand, within ABID97_RS14890 at 3093.175 kb on + strand, within ABID97_RS14890 at 3093.292 kb on + strand, within ABID97_RS14890 at 3093.292 kb on + strand, within ABID97_RS14890 at 3093.292 kb on + strand, within ABID97_RS14890 at 3093.292 kb on + strand, within ABID97_RS14890 at 3093.292 kb on + strand, within ABID97_RS14890 at 3094.582 kb on + strand at 3094.582 kb on + strand at 3094.583 kb on - strand at 3094.583 kb on - strand at 3094.583 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 3,092,868 + +0.1 3,092,869 - -0.1 3,093,017 - ABID97_RS14890 0.17 +1.2 3,093,175 + ABID97_RS14890 0.49 +1.7 3,093,292 + ABID97_RS14890 0.73 +1.5 3,093,292 + ABID97_RS14890 0.73 +1.3 3,093,292 + ABID97_RS14890 0.73 +0.9 3,093,292 + ABID97_RS14890 0.73 +0.6 3,093,292 + ABID97_RS14890 0.73 +0.9 3,094,582 + +0.3 3,094,582 + -0.3 3,094,583 - +0.3 3,094,583 - -0.7 3,094,583 - -1.8
Or see this region's nucleotide sequence