Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09305

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,056,684	+		PFLU_RS09300	0.66	+1.1
2,056,684	+		PFLU_RS09300	0.66	+0.3
2,056,684	+		PFLU_RS09300	0.66	-0.2
2,056,684	+		PFLU_RS09300	0.66	+0.0
2,056,684	+		PFLU_RS09300	0.66	-0.4
2,056,697	+		PFLU_RS09300	0.67	-1.3
2,056,697	+		PFLU_RS09300	0.67	+0.1
2,056,697	+		PFLU_RS09300	0.67	-0.3
2,056,697	+		PFLU_RS09300	0.67	+0.6
2,056,697	+		PFLU_RS09300	0.67	+1.1
2,056,697	+		PFLU_RS09300	0.67	+0.6
2,056,698	-		PFLU_RS09300	0.67	+1.2
2,056,703	-		PFLU_RS09300	0.68	-0.2
2,056,737	+		PFLU_RS09300	0.72	-0.8
2,056,737	+		PFLU_RS09300	0.72	-0.2
2,056,738	-		PFLU_RS09300	0.72	+2.0
2,056,738	-		PFLU_RS09300	0.72	+0.2
2,056,741	+		PFLU_RS09300	0.73	-0.4
2,056,741	+		PFLU_RS09300	0.73	+0.8
2,056,741	+		PFLU_RS09300	0.73	-3.0
2,056,741	+		PFLU_RS09300	0.73	-0.2
2,056,741	+		PFLU_RS09300	0.73	-0.4
2,056,741	+		PFLU_RS09300	0.73	-0.5
2,056,741	+		PFLU_RS09300	0.73	-0.4
2,056,742	-		PFLU_RS09300	0.73	-1.2
2,056,742	-		PFLU_RS09300	0.73	+0.6
2,056,742	-		PFLU_RS09300	0.73	-0.4
2,056,742	-		PFLU_RS09300	0.73	+0.8
2,056,742	-		PFLU_RS09300	0.73	+0.8
2,056,742	-		PFLU_RS09300	0.73	-0.4
2,056,742	-		PFLU_RS09300	0.73	+0.6
2,056,742	-		PFLU_RS09300	0.73	+0.0
2,056,742	-		PFLU_RS09300	0.73	-1.4
2,056,742	-		PFLU_RS09300	0.73	-1.7
2,056,746	-		PFLU_RS09300	0.73	+0.5
2,056,839	+		PFLU_RS09300	0.84	+0.0
2,056,839	+		PFLU_RS09300	0.84	-0.4
2,056,840	-		PFLU_RS09300	0.84	+0.6
2,056,863	+		PFLU_RS09300	0.87	-0.1
2,056,863	+		PFLU_RS09300	0.87	-0.3
2,056,863	+		PFLU_RS09300	0.87	-0.3
2,056,864	-		PFLU_RS09300	0.87	+1.0
2,056,871	+		PFLU_RS09300	0.88	+1.5
2,056,871	+		PFLU_RS09300	0.88	-0.7
2,056,871	+		PFLU_RS09300	0.88	+0.9
2,056,871	+		PFLU_RS09300	0.88	+0.8
2,056,871	+		PFLU_RS09300	0.88	-0.2
2,056,871	+		PFLU_RS09300	0.88	-2.0
2,056,871	+		PFLU_RS09300	0.88	+1.6
2,056,872	-		PFLU_RS09300	0.88	+0.5
2,056,872	-		PFLU_RS09300	0.88	-0.7
2,056,872	-		PFLU_RS09300	0.88	+0.9
2,056,872	-		PFLU_RS09300	0.88	+0.3
2,056,872	-		PFLU_RS09300	0.88	+1.5
2,056,872	-		PFLU_RS09300	0.88	+0.7
2,056,898	+				+1.0
2,056,899	-				-0.9
2,056,923	+				+0.7
2,056,945	+				-0.4
2,056,945	+				-1.2
2,056,945	+				-0.4
2,056,945	+				+1.8
2,056,945	+				+0.2
2,056,945	+				-0.2
2,056,946	-				+0.7
2,056,946	-				-0.4
2,056,946	-				+0.6
2,056,946	-				-0.5
2,056,946	-				+0.8
2,056,946	-				+1.8
2,056,951	+				-0.6
2,056,951	+				-2.0
2,056,951	+				-0.5
2,056,951	+				-0.5
2,056,952	-				-0.1
2,056,992	-				-1.7
2,057,003	+				+0.0
2,057,003	+				+0.0
2,057,003	+				+0.6
2,057,004	-				+1.6
2,057,004	-				+1.6
2,057,004	-				+1.6
2,057,004	-				+1.6
2,057,004	-				+0.6
2,057,004	-				+1.6
2,057,004	-				+1.6
2,057,004	-				-0.4
2,057,004	-				+0.0
2,057,084	+				+1.6
2,057,131	+				+0.6
2,057,131	+				+1.6
2,057,164	+				+0.6
2,057,164	+				+0.6
2,057,165	-				-0.7
2,057,165	-				+0.0
2,057,167	+				+1.6
2,057,167	+				+0.6
2,057,167	+				+0.6
2,057,168	-				+0.6
2,057,168	-				-0.4
2,057,168	-				-0.4
2,057,168	-				+1.6
2,057,168	-				+1.6
2,057,168	-				+0.0
2,057,233	+				+0.6
2,057,234	-				+0.0
2,057,234	-				+1.6
2,057,276	+				+0.6
2,057,286	+				-0.4
2,057,287	-				+0.6
2,057,295	+				+1.6
2,057,295	+				-0.7
2,057,295	+				+1.6
2,057,353	-				+1.6
2,057,418	+				+1.6
2,057,419	-				+1.6
2,057,419	-				+1.6
2,057,446	-				+0.6
2,057,460	+				+0.6
2,057,460	+				+1.6
2,057,460	+				+0.0
2,057,461	-				+0.6
2,057,461	-				-0.7
2,057,577	+				+0.0
2,057,577	+				+0.6
2,057,578	-				-0.7
2,057,578	-				-0.7
2,057,578	-				+1.6
2,057,682	-				-1.0
2,057,682	-				+1.6
2,057,732	+				+1.6
2,057,795	-				+0.6
2,057,795	-				+0.6
2,057,868	+		PFLU_RS09305	0.10	+1.6
2,057,871	+		PFLU_RS09305	0.10	+0.0
2,057,872	-		PFLU_RS09305	0.10	+1.6
2,057,880	+		PFLU_RS09305	0.11	+0.6
2,057,915	+		PFLU_RS09305	0.13	+0.6
2,057,916	-		PFLU_RS09305	0.13	+0.6
2,057,916	-		PFLU_RS09305	0.13	+0.0
2,057,916	-		PFLU_RS09305	0.13	+1.6
2,057,961	-		PFLU_RS09305	0.15	+0.6
2,057,991	-		PFLU_RS09305	0.17	+1.6
2,058,041	+		PFLU_RS09305	0.19	+1.6
2,058,105	+		PFLU_RS09305	0.23	+0.6
2,058,105	+		PFLU_RS09305	0.23	+1.6
2,058,106	-		PFLU_RS09305	0.23	+1.6
2,058,197	+		PFLU_RS09305	0.27	-1.2
2,058,209	+		PFLU_RS09305	0.28	+1.6
2,058,209	+		PFLU_RS09305	0.28	+0.0
2,058,210	-		PFLU_RS09305	0.28	+0.0
2,058,210	-		PFLU_RS09305	0.28	+1.6
2,058,210	-		PFLU_RS09305	0.28	+1.6
2,058,210	-		PFLU_RS09305	0.28	+1.6
2,058,215	+		PFLU_RS09305	0.28	+0.0
2,058,232	-		PFLU_RS09305	0.29	-0.4
2,058,243	-		PFLU_RS09305	0.30	-0.5
2,058,314	+		PFLU_RS09305	0.33	+0.6
2,058,337	+		PFLU_RS09305	0.35	+1.5
2,058,338	-		PFLU_RS09305	0.35	+1.0
2,058,338	-		PFLU_RS09305	0.35	-0.5
2,058,342	-		PFLU_RS09305	0.35	-2.2
2,058,353	+		PFLU_RS09305	0.35	-1.3
2,058,353	+		PFLU_RS09305	0.35	-1.4
2,058,353	+		PFLU_RS09305	0.35	-1.3
2,058,353	+		PFLU_RS09305	0.35	-2.3
2,058,353	+		PFLU_RS09305	0.35	-2.3
2,058,353	+		PFLU_RS09305	0.35	-1.5
2,058,353	+		PFLU_RS09305	0.35	-0.7
2,058,353	+		PFLU_RS09305	0.35	-2.5
2,058,353	+		PFLU_RS09305	0.35	-0.2
2,058,353	+		PFLU_RS09305	0.35	-1.0
2,058,353	+		PFLU_RS09305	0.35	-0.6
2,058,354	-		PFLU_RS09305	0.35	-1.2
2,058,354	-		PFLU_RS09305	0.35	+0.4
2,058,354	-		PFLU_RS09305	0.35	-1.2
2,058,354	-		PFLU_RS09305	0.35	-2.5
2,058,354	-		PFLU_RS09305	0.35	-1.5
2,058,354	-		PFLU_RS09305	0.35	-1.7
2,058,354	-		PFLU_RS09305	0.35	-2.0
2,058,354	-		PFLU_RS09305	0.35	-1.7
2,058,354	-		PFLU_RS09305	0.35	-1.4
2,058,355	+		PFLU_RS09305	0.36	-0.6
2,058,355	+		PFLU_RS09305	0.36	+1.0
2,058,355	+		PFLU_RS09305	0.36	-0.8
2,058,355	+		PFLU_RS09305	0.36	+1.8
2,058,355	+		PFLU_RS09305	0.36	+0.4
2,058,355	+		PFLU_RS09305	0.36	+0.4
2,058,355	+		PFLU_RS09305	0.36	+0.0
2,058,356	-		PFLU_RS09305	0.36	+0.2
2,058,356	-		PFLU_RS09305	0.36	+0.6
2,058,356	-		PFLU_RS09305	0.36	+0.3
2,058,356	-		PFLU_RS09305	0.36	-0.4
2,058,356	-		PFLU_RS09305	0.36	-0.5
2,058,422	+		PFLU_RS09305	0.39	-0.0
2,058,422	+		PFLU_RS09305	0.39	+0.1
2,058,423	-		PFLU_RS09305	0.39	-2.1
2,058,423	-		PFLU_RS09305	0.39	-1.0
2,058,500	+		PFLU_RS09305	0.43	+0.9
2,058,561	+		PFLU_RS09305	0.46	-0.7
2,058,570	+		PFLU_RS09305	0.47	-0.5
2,058,570	+		PFLU_RS09305	0.47	-0.1
2,058,570	+		PFLU_RS09305	0.47	+1.0
2,058,570	+		PFLU_RS09305	0.47	+0.8
2,058,570	+		PFLU_RS09305	0.47	-0.2
2,058,570	+		PFLU_RS09305	0.47	+0.3
2,058,572	+		PFLU_RS09305	0.47	-0.4
2,058,572	+		PFLU_RS09305	0.47	-0.1
2,058,572	+		PFLU_RS09305	0.47	-1.1
2,058,572	+		PFLU_RS09305	0.47	+1.0
2,058,572	+		PFLU_RS09305	0.47	-0.6
2,058,572	+		PFLU_RS09305	0.47	-0.5
2,058,572	+		PFLU_RS09305	0.47	+0.2
2,058,573	-		PFLU_RS09305	0.47	+0.0
2,058,573	-		PFLU_RS09305	0.47	-3.6
2,058,573	-		PFLU_RS09305	0.47	-0.5
2,058,573	-		PFLU_RS09305	0.47	+0.2
2,058,612	+		PFLU_RS09305	0.49	-0.7
2,058,612	+		PFLU_RS09305	0.49	-0.8
2,058,613	-		PFLU_RS09305	0.49	-0.4
2,058,613	-		PFLU_RS09305	0.49	-1.5
2,058,643	+		PFLU_RS09305	0.50	-1.8
2,058,643	+		PFLU_RS09305	0.50	-2.2
2,058,643	+		PFLU_RS09305	0.50	-0.2
2,058,643	+		PFLU_RS09305	0.50	-0.2
2,058,643	+		PFLU_RS09305	0.50	-2.0
2,058,644	-		PFLU_RS09305	0.51	-1.7
2,058,644	-		PFLU_RS09305	0.51	-1.2
2,058,644	-		PFLU_RS09305	0.51	-0.1
2,058,644	-		PFLU_RS09305	0.51	+0.0
2,058,644	-		PFLU_RS09305	0.51	-0.6
2,058,644	-		PFLU_RS09305	0.51	-0.7
2,058,644	-		PFLU_RS09305	0.51	-2.4
2,058,644	-		PFLU_RS09305	0.51	-2.5
2,058,644	-		PFLU_RS09305	0.51	-0.4
2,058,644	-		PFLU_RS09305	0.51	-0.4
2,058,647	+		PFLU_RS09305	0.51	-0.5
2,058,647	+		PFLU_RS09305	0.51	-1.8
2,058,647	+		PFLU_RS09305	0.51	-0.7
2,058,647	+		PFLU_RS09305	0.51	+0.6
2,058,647	+		PFLU_RS09305	0.51	-1.2
2,058,647	+		PFLU_RS09305	0.51	-1.4
2,058,647	+		PFLU_RS09305	0.51	-0.9
2,058,647	+		PFLU_RS09305	0.51	-1.8
2,058,647	+		PFLU_RS09305	0.51	-1.8
2,058,648	-		PFLU_RS09305	0.51	-1.7
2,058,648	-		PFLU_RS09305	0.51	-1.5
2,058,648	-		PFLU_RS09305	0.51	-1.2
2,058,648	-		PFLU_RS09305	0.51	-1.2
2,058,648	-		PFLU_RS09305	0.51	-1.0
2,058,648	-		PFLU_RS09305	0.51	-2.1
2,058,648	-		PFLU_RS09305	0.51	+0.0
2,058,648	-		PFLU_RS09305	0.51	-2.4
2,058,648	-		PFLU_RS09305	0.51	-1.0
2,058,648	-		PFLU_RS09305	0.51	-1.4
2,058,648	-		PFLU_RS09305	0.51	-2.5
2,058,683	+		PFLU_RS09305	0.53	-1.5
2,058,683	+		PFLU_RS09305	0.53	-0.2
2,058,684	-		PFLU_RS09305	0.53	-1.5
2,058,684	-		PFLU_RS09305	0.53	+0.2
2,058,791	+		PFLU_RS09305	0.58	-0.5
2,058,791	+		PFLU_RS09305	0.58	-1.0
2,058,791	+		PFLU_RS09305	0.58	-0.1
2,058,792	-		PFLU_RS09305	0.58	-2.3
2,058,813	+		PFLU_RS09305	0.59	+1.0
2,058,836	-		PFLU_RS09305	0.60	+0.6
2,058,975	+		PFLU_RS09305	0.68	-2.7
2,058,975	+		PFLU_RS09305	0.68	-1.0
2,058,975	+		PFLU_RS09305	0.68	+1.2
2,058,976	-		PFLU_RS09305	0.68	+3.6
2,058,976	-		PFLU_RS09305	0.68	-1.5
2,058,976	-		PFLU_RS09305	0.68	+1.2
2,058,976	-		PFLU_RS09305	0.68	+0.0
2,059,013	+		PFLU_RS09305	0.70	-0.8
2,059,013	+		PFLU_RS09305	0.70	-0.8
2,059,014	-		PFLU_RS09305	0.70	-2.1
2,059,028	+		PFLU_RS09305	0.70	-2.2
2,059,028	+		PFLU_RS09305	0.70	+0.2
2,059,029	-		PFLU_RS09305	0.71	-0.5
2,059,070	+		PFLU_RS09305	0.73	+0.0
2,059,070	+		PFLU_RS09305	0.73	+0.5
2,059,143	-		PFLU_RS09305	0.76	-2.7
2,059,230	-		PFLU_RS09305	0.81	-1.2
2,059,230	-		PFLU_RS09305	0.81	-2.4
2,059,230	-		PFLU_RS09305	0.81	-2.8
2,059,232	+		PFLU_RS09305	0.81	-0.7
2,059,232	+		PFLU_RS09305	0.81	-0.8
2,059,232	+		PFLU_RS09305	0.81	-2.3
2,059,233	-		PFLU_RS09305	0.81	-1.0
2,059,233	-		PFLU_RS09305	0.81	-2.0
2,059,288	+		PFLU_RS09305	0.84	-2.7
2,059,289	-		PFLU_RS09305	0.84	-1.5
2,059,311	+		PFLU_RS09305	0.85	-1.9
2,059,347	-		PFLU_RS09305	0.87	-2.5
2,059,385	+		PFLU_RS09305	0.89	-0.2
2,059,385	+		PFLU_RS09305	0.89	+0.6
2,059,386	-		PFLU_RS09305	0.89	-0.2
2,059,386	-		PFLU_RS09305	0.89	-0.1
2,059,386	-		PFLU_RS09305	0.89	-1.5
2,059,386	-		PFLU_RS09305	0.89	-1.5
2,059,386	-		PFLU_RS09305	0.89	-1.8
2,059,386	-		PFLU_RS09305	0.89	-2.2
2,059,424	+				+0.4
2,059,424	+				+0.7
2,059,424	+				+0.4
2,059,425	-				-0.1
2,059,425	-				-1.8
2,059,425	-				-2.6
2,059,463	+				+0.5
2,059,463	+				-0.7
2,059,464	-				-0.3
2,059,464	-				-0.7
2,059,464	-				-2.6
2,059,464	-				-0.0
2,059,464	-				+0.0
2,059,464	-				-1.7
2,059,464	-				-0.7
2,059,464	-				-1.5
2,059,515	+				+0.0
2,059,526	+				+1.1
2,059,526	+				+0.4
2,059,526	+				+0.7
2,059,526	+				-0.4
2,059,526	+				+0.8
2,059,526	+				-0.4
2,059,526	+				-0.2
2,059,527	-				-1.4
2,059,529	+				-2.8
2,059,529	+				+0.1
2,059,529	+				-0.1
2,059,529	+				+0.0
2,059,529	+				+0.0
2,059,530	-				-0.7
2,059,594	+				-0.6
2,059,594	+				+0.2
2,059,594	+				+0.9
2,059,594	+				+1.2
2,059,594	+				-0.3
2,059,595	-				+0.4
2,059,707	+				+0.0
2,059,718	+				+0.9
2,059,775	+				+0.6
2,059,940	+		PFLU_RS30550	0.37	-0.4
2,059,940	+		PFLU_RS30550	0.37	+0.7
2,059,941	-		PFLU_RS30550	0.37	+0.4
2,059,964	+		PFLU_RS30550	0.44	+0.6
2,059,964	+		PFLU_RS30550	0.44	-0.7
2,059,964	+		PFLU_RS30550	0.44	-1.7
2,059,964	+		PFLU_RS30550	0.44	-0.7
2,059,964	+		PFLU_RS30550	0.44	+0.2
2,059,964	+		PFLU_RS30550	0.44	+0.3
2,059,965	-		PFLU_RS30550	0.44	+1.5
2,059,965	-		PFLU_RS30550	0.44	+1.2
2,059,965	-		PFLU_RS30550	0.44	-0.2
2,060,013	-		PFLU_RS30550	0.59	+1.8
2,060,013	-		PFLU_RS30550	0.59	-0.7
2,060,048	-		PFLU_RS30550	0.69	-1.5
2,060,227	-				+0.6
2,060,311	+		PFLU_RS31495	0.43	+1.1
2,060,311	+		PFLU_RS31495	0.43	-1.7
2,060,311	+		PFLU_RS31495	0.43	-0.3
2,060,311	+		PFLU_RS31495	0.43	-0.1
2,060,312	-		PFLU_RS31495	0.43	-1.4
2,060,346	-		PFLU_RS31495	0.60	+2.5
2,060,346	-		PFLU_RS31495	0.60	-0.1
2,060,346	-		PFLU_RS31495	0.60	+0.6
2,060,431	+				+1.2
2,060,431	+				+0.7
2,060,431	+				-1.0
2,060,432	-				-1.5
2,060,432	-				+1.0
2,060,435	-				+0.2
2,060,450	+				+0.8
2,060,450	+				+0.6
2,060,450	+				-0.5
2,060,451	-				+0.5
2,060,481	+				-3.0
2,060,481	+				-1.8
2,060,482	-				+0.5
2,060,482	-				+0.6
2,060,517	+				+1.4
2,060,517	+				-0.1
2,060,517	+				+0.2
2,060,517	+				-0.0
2,060,517	+				+1.0
2,060,517	+				+0.7
2,060,517	+				+1.1
2,060,518	-				+1.2
2,060,518	-				+0.7
2,060,518	-				+0.4
2,060,518	-				+0.9
2,060,518	-				-0.2
2,060,518	-				-1.0
2,060,518	-				-1.0
2,060,518	-				-2.8
2,060,518	-				-0.4
2,060,540	-				-0.7
2,060,540	-				-0.2
2,060,540	-				+0.6
2,060,540	-				-1.0
2,060,567	+				+0.9