Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09170

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
2,030,118	-		PFLU_RS09165	0.55	+0.4
2,030,144	+		PFLU_RS09165	0.56	+1.1
2,030,144	+		PFLU_RS09165	0.56	+0.2
2,030,144	+		PFLU_RS09165	0.56	+0.6
2,030,144	+		PFLU_RS09165	0.56	-0.4
2,030,144	+		PFLU_RS09165	0.56	-0.9
2,030,145	-		PFLU_RS09165	0.56	-0.2
2,030,145	-		PFLU_RS09165	0.56	-0.0
2,030,145	-		PFLU_RS09165	0.56	+0.4
2,030,145	-		PFLU_RS09165	0.56	+1.1
2,030,145	-		PFLU_RS09165	0.56	-1.6
2,030,145	-		PFLU_RS09165	0.56	+0.0
2,030,145	-		PFLU_RS09165	0.56	-0.9
2,030,147	+		PFLU_RS09165	0.56	-1.6
2,030,148	-		PFLU_RS09165	0.56	-0.3
2,030,246	+		PFLU_RS09165	0.62	-1.9
2,030,246	+		PFLU_RS09165	0.62	+0.8
2,030,246	+		PFLU_RS09165	0.62	+1.1
2,030,247	-		PFLU_RS09165	0.62	+0.0
2,030,295	-		PFLU_RS09165	0.65	-0.2
2,030,295	-		PFLU_RS09165	0.65	+0.7
2,030,295	-		PFLU_RS09165	0.65	+0.4
2,030,354	-		PFLU_RS09165	0.68	+1.6
2,030,609	+		PFLU_RS09165	0.83	+0.2
2,030,610	-		PFLU_RS09165	0.83	-0.0
2,030,624	+		PFLU_RS09165	0.84	-1.5
2,030,624	+		PFLU_RS09165	0.84	+1.3
2,030,624	+		PFLU_RS09165	0.84	-0.1
2,030,625	-		PFLU_RS09165	0.84	-1.7
2,030,625	-		PFLU_RS09165	0.84	+2.2
2,030,823	+				-3.0
2,030,824	-				+0.9
2,030,824	-				+0.5
2,030,863	+				+0.5
2,030,863	+				-1.0
2,030,889	+				+1.1
2,030,889	+				-0.4
2,030,889	+				-0.0
2,030,889	+				+1.0
2,030,889	+				-0.9
2,030,889	+				+0.6
2,030,889	+				-0.3
2,030,889	+				-0.5
2,030,889	+				-1.5
2,030,889	+				+0.5
2,030,889	+				-0.5
2,030,889	+				+1.2
2,030,889	+				-0.5
2,030,889	+				+0.4
2,030,889	+				+1.5
2,030,889	+				-0.4
2,030,889	+				+0.7
2,030,889	+				-0.4
2,030,889	+				-0.7
2,030,890	-				+0.4
2,030,890	-				-0.4
2,030,890	-				-0.8
2,030,890	-				-1.8
2,030,890	-				+0.2
2,030,890	-				-2.3
2,030,890	-				+0.0
2,030,890	-				+1.1
2,030,890	-				-1.2
2,030,890	-				-1.0
2,030,890	-				+0.3
2,030,890	-				-0.3
2,030,890	-				+0.0
2,030,890	-				-0.4
2,030,890	-				+0.6
2,030,890	-				-1.2
2,030,890	-				-0.0
2,030,890	-				-0.6
2,030,890	-				-0.3
2,030,890	-				+1.2
2,030,890	-				-1.0
2,030,890	-				+0.1
2,030,890	-				+0.8
2,030,890	-				-1.3
2,030,890	-				-0.2
2,030,890	-				+1.6
2,030,919	+				+0.6
2,030,919	+				-0.1
2,030,919	+				+0.1
2,030,920	-				+0.6
2,030,920	-				-0.2
2,030,920	-				+0.6
2,030,928	-				+2.6
2,030,955	-				+0.8
2,030,955	-				-1.0
2,030,967	+				+1.4
2,030,967	+				+0.6
2,030,967	+				-0.5
2,030,967	+				-0.4
2,030,967	+				+0.9
2,030,967	+				+1.2
2,030,968	-				+1.0
2,030,968	-				+2.4
2,030,998	+				+0.1
2,030,998	+				+1.2
2,030,998	+				+0.5
2,030,999	-				+0.2
2,030,999	-				+0.4
2,030,999	-				+0.4
2,031,006	-				-0.1
2,031,016	+				+0.1
2,031,017	-				+0.6
2,031,017	-				+0.6
2,031,017	-				-1.4
2,031,224	+				+0.4
2,031,224	+				-0.0
2,031,224	+				+1.2
2,031,225	-				+0.7
2,031,225	-				+0.5
2,031,346	+		PFLU_RS09170	0.13	+0.4
2,031,347	-		PFLU_RS09170	0.13	+0.4
2,031,381	-		PFLU_RS09170	0.15	-1.4
2,031,381	-		PFLU_RS09170	0.15	+0.5
2,031,381	-		PFLU_RS09170	0.15	-0.6
2,031,381	-		PFLU_RS09170	0.15	-0.4
2,031,401	+		PFLU_RS09170	0.16	-0.4
2,031,614	+		PFLU_RS09170	0.29	-1.1
2,031,615	-		PFLU_RS09170	0.29	-0.3
2,031,615	-		PFLU_RS09170	0.29	-1.1
2,031,843	-		PFLU_RS09170	0.42	+0.7
2,032,067	+		PFLU_RS09170	0.55	-0.1
2,032,067	+		PFLU_RS09170	0.55	-0.3
2,032,067	+		PFLU_RS09170	0.55	+0.9
2,032,068	-		PFLU_RS09170	0.55	-2.3
2,032,068	-		PFLU_RS09170	0.55	-1.0
2,032,094	+		PFLU_RS09170	0.56	-1.3
2,032,094	+		PFLU_RS09170	0.56	+1.4
2,032,094	+		PFLU_RS09170	0.56	-2.5
2,032,095	-		PFLU_RS09170	0.56	-0.1
2,032,095	-		PFLU_RS09170	0.56	+1.1
2,032,095	-		PFLU_RS09170	0.56	-0.5
2,032,095	-		PFLU_RS09170	0.56	+0.9
2,032,095	-		PFLU_RS09170	0.56	+0.2
2,032,098	-		PFLU_RS09170	0.56	+0.1
2,032,098	-		PFLU_RS09170	0.56	+0.6
2,032,196	+		PFLU_RS09170	0.62	+0.4
2,032,196	+		PFLU_RS09170	0.62	-0.2
2,032,196	+		PFLU_RS09170	0.62	+0.3
2,032,196	+		PFLU_RS09170	0.62	+0.7
2,032,196	+		PFLU_RS09170	0.62	+0.4
2,032,196	+		PFLU_RS09170	0.62	-0.3
2,032,196	+		PFLU_RS09170	0.62	+0.8
2,032,196	+		PFLU_RS09170	0.62	+0.3
2,032,196	+		PFLU_RS09170	0.62	+0.5
2,032,196	+		PFLU_RS09170	0.62	-0.2
2,032,196	+		PFLU_RS09170	0.62	+1.6
2,032,196	+		PFLU_RS09170	0.62	+1.0
2,032,196	+		PFLU_RS09170	0.62	+0.5
2,032,196	+		PFLU_RS09170	0.62	-0.2
2,032,196	+		PFLU_RS09170	0.62	-0.1
2,032,196	+		PFLU_RS09170	0.62	+0.2
2,032,196	+		PFLU_RS09170	0.62	-0.7
2,032,196	+		PFLU_RS09170	0.62	-0.1
2,032,196	+		PFLU_RS09170	0.62	+0.7
2,032,196	+		PFLU_RS09170	0.62	+0.8
2,032,196	+		PFLU_RS09170	0.62	-0.8
2,032,196	+		PFLU_RS09170	0.62	+1.6
2,032,196	+		PFLU_RS09170	0.62	-0.4
2,032,196	+		PFLU_RS09170	0.62	-1.5
2,032,196	+		PFLU_RS09170	0.62	+0.7
2,032,196	+		PFLU_RS09170	0.62	+0.3
2,032,196	+		PFLU_RS09170	0.62	+1.1
2,032,196	+		PFLU_RS09170	0.62	-0.2
2,032,197	-		PFLU_RS09170	0.62	-0.3
2,032,197	-		PFLU_RS09170	0.62	+1.0
2,032,197	-		PFLU_RS09170	0.62	+1.0
2,032,197	-		PFLU_RS09170	0.62	+0.3
2,032,197	-		PFLU_RS09170	0.62	+0.0
2,032,197	-		PFLU_RS09170	0.62	+0.8
2,032,197	-		PFLU_RS09170	0.62	+0.3
2,032,197	-		PFLU_RS09170	0.62	+0.0
2,032,197	-		PFLU_RS09170	0.62	-0.7
2,032,197	-		PFLU_RS09170	0.62	-0.5
2,032,197	-		PFLU_RS09170	0.62	-0.3
2,032,197	-		PFLU_RS09170	0.62	-0.0
2,032,197	-		PFLU_RS09170	0.62	+0.6
2,032,197	-		PFLU_RS09170	0.62	+0.2
2,032,197	-		PFLU_RS09170	0.62	+0.1
2,032,197	-		PFLU_RS09170	0.62	+0.4
2,032,197	-		PFLU_RS09170	0.62	-0.2
2,032,197	-		PFLU_RS09170	0.62	+0.1
2,032,197	-		PFLU_RS09170	0.62	+0.3
2,032,197	-		PFLU_RS09170	0.62	+0.4
2,032,244	+		PFLU_RS09170	0.65	+0.7
2,032,244	+		PFLU_RS09170	0.65	+0.0
2,032,244	+		PFLU_RS09170	0.65	-1.4
2,032,244	+		PFLU_RS09170	0.65	-0.0
2,032,245	-		PFLU_RS09170	0.65	-0.9
2,032,245	-		PFLU_RS09170	0.65	+1.0
2,032,245	-		PFLU_RS09170	0.65	+0.5
2,032,245	-		PFLU_RS09170	0.65	-2.9
2,032,245	-		PFLU_RS09170	0.65	+0.4
2,032,245	-		PFLU_RS09170	0.65	+0.8
2,032,245	-		PFLU_RS09170	0.65	+0.8
2,032,388	-		PFLU_RS09170	0.73	-1.4
2,032,484	+		PFLU_RS09170	0.79	+0.9
2,032,485	-		PFLU_RS09170	0.79	+0.5
2,032,485	-		PFLU_RS09170	0.79	+0.9
2,032,485	-		PFLU_RS09170	0.79	+0.1
2,032,492	+		PFLU_RS09170	0.79	+0.1
2,032,492	+		PFLU_RS09170	0.79	+0.0
2,032,507	-		PFLU_RS09170	0.80	+0.6
2,032,560	-		PFLU_RS09170	0.83	+0.9
2,032,572	+		PFLU_RS09170	0.84	+3.0
2,032,574	+		PFLU_RS09170	0.84	-1.5
2,032,574	+		PFLU_RS09170	0.84	-1.3
2,032,574	+		PFLU_RS09170	0.84	+0.2
2,032,574	+		PFLU_RS09170	0.84	-0.5
2,032,574	+		PFLU_RS09170	0.84	+0.9
2,032,574	+		PFLU_RS09170	0.84	-1.1
2,032,574	+		PFLU_RS09170	0.84	-0.3
2,032,574	+		PFLU_RS09170	0.84	+0.3
2,032,574	+		PFLU_RS09170	0.84	-1.0
2,032,574	+		PFLU_RS09170	0.84	+0.3
2,032,574	+		PFLU_RS09170	0.84	-0.6
2,032,574	+		PFLU_RS09170	0.84	+0.9
2,032,574	+		PFLU_RS09170	0.84	-0.5
2,032,574	+		PFLU_RS09170	0.84	+0.1
2,032,574	+		PFLU_RS09170	0.84	-1.4
2,032,574	+		PFLU_RS09170	0.84	+0.2
2,032,575	-		PFLU_RS09170	0.84	-1.4
2,032,575	-		PFLU_RS09170	0.84	-0.8
2,032,575	-		PFLU_RS09170	0.84	+0.2
2,032,575	-		PFLU_RS09170	0.84	+1.0
2,032,575	-		PFLU_RS09170	0.84	-0.5
2,032,575	-		PFLU_RS09170	0.84	-1.2
2,032,575	-		PFLU_RS09170	0.84	+0.0
2,032,575	-		PFLU_RS09170	0.84	-0.4
2,032,575	-		PFLU_RS09170	0.84	-0.4
2,032,575	-		PFLU_RS09170	0.84	-0.4
2,032,575	-		PFLU_RS09170	0.84	-0.2
2,032,575	-		PFLU_RS09170	0.84	+0.2
2,032,575	-		PFLU_RS09170	0.84	+0.3
2,032,575	-		PFLU_RS09170	0.84	+0.6
2,032,575	-		PFLU_RS09170	0.84	-0.5
2,032,575	-		PFLU_RS09170	0.84	+1.1
2,032,629	+		PFLU_RS09170	0.87	+0.5
2,032,747	+				+0.1
2,032,747	+				+0.6
2,032,748	-				-1.1
2,032,888	+				+0.2
2,032,889	-				+1.2
2,032,930	+				+0.3
2,032,931	-				+0.9
2,032,931	-				-0.9
2,032,931	-				-0.4
2,032,931	-				-0.2
2,032,978	+				-0.0
2,032,987	+				-0.3
2,033,028	+				+0.0
2,033,028	+				+0.5
2,033,044	-				+0.9
2,033,109	+		PFLU_RS09175	0.18	-0.7
2,033,109	+		PFLU_RS09175	0.18	+0.0
2,033,109	+		PFLU_RS09175	0.18	+0.0
2,033,157	+		PFLU_RS09175	0.28	-0.7
2,033,157	+		PFLU_RS09175	0.28	-1.9
2,033,158	-		PFLU_RS09175	0.28	-0.4
2,033,213	+		PFLU_RS09175	0.40	+1.0
2,033,243	-		PFLU_RS09175	0.46	-1.1
2,033,276	-		PFLU_RS09175	0.53	-0.7
2,033,386	+		PFLU_RS09175	0.77	-2.5
2,033,386	+		PFLU_RS09175	0.77	+0.5
2,033,386	+		PFLU_RS09175	0.77	+0.3
2,033,402	-		PFLU_RS09175	0.80	+0.7
2,033,453	+				-0.4
2,033,453	+				-1.4
2,033,454	-				+0.8
2,033,564	+				+0.0
2,033,565	-				-0.7
2,033,577	-				-0.1
2,033,577	-				-0.3
2,033,577	-				+1.3
2,033,577	-				-0.1
2,033,618	+				+0.4
2,033,618	+				+0.3
2,033,618	+				-1.7
2,033,618	+				-0.4
2,033,618	+				-0.5
2,033,618	+				-1.7
2,033,618	+				+3.0
2,033,618	+				+0.0
2,033,618	+				-2.0
2,033,618	+				+0.3
2,033,618	+				+0.0
2,033,619	-				+0.5
2,033,619	-				-1.8
2,033,619	-				+1.6
2,033,619	-				+0.9
2,033,619	-				+1.0
2,033,619	-				+0.4
2,033,619	-				-0.5
2,033,619	-				+0.2
2,033,620	+				-1.4
2,033,620	+				+0.7
2,033,620	+				-1.7
2,033,621	-				-0.4
2,033,621	-				+0.3
2,033,621	-				-0.4
2,033,621	-				-2.7
2,033,635	+				-1.0
2,033,636	-				-2.9
2,033,636	-				+0.6
2,033,787	+		PFLU_RS09180	0.21	-1.4
2,033,787	+		PFLU_RS09180	0.21	+0.5
2,033,787	+		PFLU_RS09180	0.21	-3.3
2,033,787	+		PFLU_RS09180	0.21	+0.9
2,033,787	+		PFLU_RS09180	0.21	+0.6
2,033,787	+		PFLU_RS09180	0.21	-0.5
2,033,787	+		PFLU_RS09180	0.21	+0.6
2,033,788	-		PFLU_RS09180	0.21	-2.0
2,033,788	-		PFLU_RS09180	0.21	+1.2
2,033,788	-		PFLU_RS09180	0.21	-1.6