Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07785

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,731,977	+				+0.1
1,731,977	+				+1.0
1,731,978	-				-0.2
1,731,995	+				+1.8
1,731,995	+				+0.9
1,731,995	+				+0.1
1,731,995	+				+0.9
1,731,996	-				-0.3
1,731,996	-				-1.6
1,731,996	-				-0.9
1,731,996	-				-0.1
1,731,996	-				+0.3
1,732,021	+				-0.6
1,732,035	+				-1.2
1,732,035	+				+0.2
1,732,036	-				-0.2
1,732,040	+				-1.3
1,732,041	-				+0.1
1,732,041	-				+0.3
1,732,041	-				-1.4
1,732,360	+		PFLU_RS07780	0.47	+1.2
1,732,698	+				+0.2
1,732,698	+				-0.8
1,732,699	-				+0.6
1,732,746	+				+0.9
1,732,746	+				+1.4
1,732,746	+				+0.7
1,732,747	-				-0.3
1,732,747	-				+1.2
1,732,747	-				-0.3
1,732,747	-				+0.4
1,732,747	-				+0.5
1,732,747	-				+0.8
1,732,753	-				+0.7
1,732,769	+				+2.4
1,732,769	+				+1.3
1,732,769	+				-1.5
1,732,769	+				-1.9
1,732,769	+				+0.2
1,732,770	-				-0.3
1,732,797	+				-0.6
1,732,798	-				-2.0
1,732,816	+				-2.9
1,732,816	+				-1.6
1,732,816	+				-0.1
1,732,816	+				+1.3
1,732,817	-				-0.8
1,732,817	-				-0.8
1,732,818	+				-0.1
1,732,818	+				+0.8
1,732,818	+				+1.2
1,732,818	+				+1.4
1,732,818	+				+0.0
1,732,818	+				+0.1
1,732,818	+				+1.7
1,732,818	+				-0.6
1,732,818	+				+0.2
1,732,818	+				-0.0
1,732,818	+				-0.8
1,732,818	+				-0.2
1,732,818	+				+0.3
1,732,818	+				-2.2
1,732,818	+				-0.9
1,732,818	+				-0.2
1,732,818	+				+0.5
1,732,819	-				+1.0
1,732,819	-				+1.4
1,732,819	-				-0.7
1,732,819	-				-1.7
1,732,819	-				+0.5
1,732,819	-				+0.6
1,732,819	-				-0.1
1,732,819	-				-1.8
1,732,819	-				+2.0
1,732,819	-				-0.1
1,732,819	-				+0.5
1,732,819	-				-0.8
1,732,819	-				-1.3
1,732,819	-				-2.2
1,732,819	-				-0.3
1,732,819	-				+2.4
1,732,819	-				-0.4
1,732,819	-				-3.1
1,732,819	-				-0.6
1,732,819	-				+1.2
1,732,831	-				+0.2
1,732,841	+				+1.5
1,732,877	-				-1.0
1,732,893	-				-0.9
1,732,893	-				+0.4
1,732,893	-				-1.6
1,732,923	+				-0.9
1,732,924	-				-1.9
1,732,924	-				-0.0
1,732,924	-				-1.0
1,733,017	+		PFLU_RS07785	0.20	+1.0
1,733,017	+		PFLU_RS07785	0.20	+2.1
1,733,017	+		PFLU_RS07785	0.20	-1.6
1,733,017	+		PFLU_RS07785	0.20	-0.0
1,733,017	+		PFLU_RS07785	0.20	+0.5
1,733,017	+		PFLU_RS07785	0.20	+1.6
1,733,018	-		PFLU_RS07785	0.20	+1.3
1,733,018	-		PFLU_RS07785	0.20	+0.2
1,733,018	-		PFLU_RS07785	0.20	-0.6
1,733,018	-		PFLU_RS07785	0.20	-0.4
1,733,018	-		PFLU_RS07785	0.20	-1.9
1,733,021	+		PFLU_RS07785	0.21	+0.1
1,733,022	-		PFLU_RS07785	0.21	+0.4
1,733,022	-		PFLU_RS07785	0.21	-2.6
1,733,022	-		PFLU_RS07785	0.21	+0.3
1,733,022	-		PFLU_RS07785	0.21	-0.6
1,733,048	+		PFLU_RS07785	0.25	-2.1
1,733,048	+		PFLU_RS07785	0.25	+1.1
1,733,048	+		PFLU_RS07785	0.25	+0.4
1,733,048	+		PFLU_RS07785	0.25	+0.0
1,733,048	+		PFLU_RS07785	0.25	+2.2
1,733,049	-		PFLU_RS07785	0.25	+0.0
1,733,049	-		PFLU_RS07785	0.25	-1.5
1,733,049	-		PFLU_RS07785	0.25	+0.3
1,733,049	-		PFLU_RS07785	0.25	-2.3
1,733,059	+		PFLU_RS07785	0.26	-1.1
1,733,303	+		PFLU_RS07785	0.62	-0.3
1,733,303	+		PFLU_RS07785	0.62	-2.2
1,733,303	+		PFLU_RS07785	0.62	-0.3
1,733,303	+		PFLU_RS07785	0.62	-0.1
1,733,303	+		PFLU_RS07785	0.62	+1.3
1,733,304	-		PFLU_RS07785	0.62	-0.3
1,733,304	-		PFLU_RS07785	0.62	-1.3
1,733,304	-		PFLU_RS07785	0.62	+0.9
1,733,304	-		PFLU_RS07785	0.62	+0.3
1,733,357	+		PFLU_RS07785	0.70	-2.1
1,733,357	+		PFLU_RS07785	0.70	+1.2
1,733,357	+		PFLU_RS07785	0.70	+2.1
1,733,357	+		PFLU_RS07785	0.70	-2.8
1,733,358	-		PFLU_RS07785	0.70	-0.6
1,733,358	-		PFLU_RS07785	0.70	+0.1
1,733,358	-		PFLU_RS07785	0.70	-0.4
1,733,358	-		PFLU_RS07785	0.70	-1.0
1,733,358	-		PFLU_RS07785	0.70	-0.3
1,733,358	-		PFLU_RS07785	0.70	-1.7
1,733,358	-		PFLU_RS07785	0.70	-1.3
1,733,358	-		PFLU_RS07785	0.70	+1.1
1,733,358	-		PFLU_RS07785	0.70	-1.6
1,733,358	-		PFLU_RS07785	0.70	+0.8
1,733,369	+		PFLU_RS07785	0.71	-0.6
1,733,369	+		PFLU_RS07785	0.71	-2.6
1,733,369	+		PFLU_RS07785	0.71	-1.6
1,733,369	+		PFLU_RS07785	0.71	-2.2
1,733,369	+		PFLU_RS07785	0.71	+0.4
1,733,369	+		PFLU_RS07785	0.71	-1.4
1,733,369	+		PFLU_RS07785	0.71	-0.6
1,733,370	-		PFLU_RS07785	0.71	-0.0
1,733,370	-		PFLU_RS07785	0.71	-1.1
1,733,370	-		PFLU_RS07785	0.71	-0.6
1,733,370	-		PFLU_RS07785	0.71	-0.6
1,733,370	-		PFLU_RS07785	0.71	-0.2
1,733,370	-		PFLU_RS07785	0.71	-0.5
1,733,381	+		PFLU_RS07785	0.73	-1.8
1,733,387	+		PFLU_RS07785	0.74	-0.4
1,733,387	+		PFLU_RS07785	0.74	+0.9
1,733,387	+		PFLU_RS07785	0.74	+0.5
1,733,387	+		PFLU_RS07785	0.74	-0.6
1,733,387	+		PFLU_RS07785	0.74	+0.7
1,733,387	+		PFLU_RS07785	0.74	+0.8
1,733,387	+		PFLU_RS07785	0.74	-0.9
1,733,388	-		PFLU_RS07785	0.74	-1.2
1,733,388	-		PFLU_RS07785	0.74	-1.6
1,733,388	-		PFLU_RS07785	0.74	+0.1
1,733,388	-		PFLU_RS07785	0.74	+0.2
1,733,388	-		PFLU_RS07785	0.74	-0.3
1,733,388	-		PFLU_RS07785	0.74	-1.8
1,733,388	-		PFLU_RS07785	0.74	-0.4
1,733,389	+		PFLU_RS07785	0.74	-0.4
1,733,389	+		PFLU_RS07785	0.74	-1.8
1,733,389	+		PFLU_RS07785	0.74	-0.1
1,733,389	+		PFLU_RS07785	0.74	+0.2
1,733,389	+		PFLU_RS07785	0.74	+0.1
1,733,389	+		PFLU_RS07785	0.74	-1.9
1,733,390	-		PFLU_RS07785	0.74	-1.5
1,733,390	-		PFLU_RS07785	0.74	+0.7
1,733,390	-		PFLU_RS07785	0.74	+0.7
1,733,390	-		PFLU_RS07785	0.74	-0.6
1,733,485	+		PFLU_RS07785	0.88	+0.1
1,733,485	+		PFLU_RS07785	0.88	-1.2
1,733,486	-		PFLU_RS07785	0.88	+0.6
1,733,489	+		PFLU_RS07785	0.89	-0.3
1,733,489	+		PFLU_RS07785	0.89	-1.0
1,733,489	+		PFLU_RS07785	0.89	-0.9
1,733,489	+		PFLU_RS07785	0.89	+0.4
1,733,489	+		PFLU_RS07785	0.89	+1.4
1,733,489	+		PFLU_RS07785	0.89	-2.6
1,733,489	+		PFLU_RS07785	0.89	-0.3
1,733,489	+		PFLU_RS07785	0.89	-1.6
1,733,489	+		PFLU_RS07785	0.89	+0.2
1,733,489	+		PFLU_RS07785	0.89	+2.1
1,733,489	+		PFLU_RS07785	0.89	+1.4
1,733,490	-		PFLU_RS07785	0.89	+2.0
1,733,490	-		PFLU_RS07785	0.89	-0.3
1,733,490	-		PFLU_RS07785	0.89	-1.1
1,733,490	-		PFLU_RS07785	0.89	-1.2
1,733,490	-		PFLU_RS07785	0.89	+1.3
1,733,490	-		PFLU_RS07785	0.89	+0.7
1,733,490	-		PFLU_RS07785	0.89	+0.1
1,733,490	-		PFLU_RS07785	0.89	-0.3
1,733,490	-		PFLU_RS07785	0.89	+0.1
1,733,490	-		PFLU_RS07785	0.89	-1.8
1,733,490	-		PFLU_RS07785	0.89	+0.2
1,733,511	-				-0.3
1,733,511	-				-0.2
1,733,564	+				+0.3
1,733,565	-				+0.6
1,733,622	-				-0.9
1,733,637	-				+0.5
1,733,637	-				-0.0
1,733,637	-				-0.3
1,733,751	+				+0.3
1,733,751	+				-1.1
1,733,751	+				+0.9
1,733,751	+				-0.2
1,733,751	+				-0.5
1,733,751	+				-2.6
1,733,751	+				-0.1
1,733,751	+				-1.4
1,733,826	+				+1.4
1,733,826	+				-0.0
1,733,827	-				-0.5
1,733,866	+		PFLU_RS07790	0.20	+1.1
1,733,866	+		PFLU_RS07790	0.20	+0.1
1,733,923	+		PFLU_RS07790	0.39	+0.9
1,734,080	+				+0.1
1,734,081	-				+0.3
1,734,081	-				+0.5
1,734,102	+				-1.5
1,734,102	+				-0.0
1,734,102	+				-0.0
1,734,102	+				+0.1
1,734,102	+				+0.9
1,734,102	+				+0.6
1,734,102	+				-0.1
1,734,102	+				+0.3
1,734,103	-				-0.1
1,734,103	-				+0.4
1,734,103	-				-0.4
1,734,103	-				+0.5
1,734,103	-				-0.5
1,734,115	+				-1.0
1,734,115	+				-0.3
1,734,116	-				-0.0
1,734,116	-				-0.8
1,734,116	-				+1.2
1,734,143	+				+0.4
1,734,143	+				+1.2
1,734,143	+				+0.5
1,734,144	-				-0.9
1,734,145	+				-0.7
1,734,146	-				-0.2
1,734,146	-				+1.1
1,734,167	+		PFLU_RS30475	0.13	+0.6
1,734,167	+		PFLU_RS30475	0.13	-0.1
1,734,167	+		PFLU_RS30475	0.13	-0.4
1,734,167	+		PFLU_RS30475	0.13	+0.4
1,734,168	-		PFLU_RS30475	0.14	-1.4
1,734,168	-		PFLU_RS30475	0.14	+0.6
1,734,168	-		PFLU_RS30475	0.14	+0.0
1,734,168	-		PFLU_RS30475	0.14	+0.4
1,734,235	-		PFLU_RS30475	0.48	+0.7
1,734,253	+		PFLU_RS30475	0.58	+1.2
1,734,253	+		PFLU_RS30475	0.58	+3.2
1,734,287	+		PFLU_RS30475	0.76	-1.2
1,734,287	+		PFLU_RS30475	0.76	+0.5
1,734,287	+		PFLU_RS30475	0.76	-1.2
1,734,288	-		PFLU_RS30475	0.76	+0.7
1,734,301	+		PFLU_RS30475	0.83	-2.2
1,734,317	+				-0.3
1,734,317	+				-1.6
1,734,356	+				+0.6
1,734,356	+				-1.2
1,734,356	+				+0.1
1,734,356	+				+0.9
1,734,356	+				-0.0
1,734,356	+				-1.4
1,734,356	+				+0.5