Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07390

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,642,789	-		PFLU_RS07380	0.62	+0.3
1,642,789	-		PFLU_RS07380	0.62	-0.5
1,642,789	-		PFLU_RS07380	0.62	-0.4
1,642,789	-		PFLU_RS07380	0.62	+0.1
1,642,902	+		PFLU_RS07380	0.74	-0.1
1,642,903	-		PFLU_RS07380	0.74	-1.6
1,642,903	-		PFLU_RS07380	0.74	+0.5
1,642,903	-		PFLU_RS07380	0.74	+0.3
1,642,903	-		PFLU_RS07380	0.74	+0.3
1,642,959	+		PFLU_RS07380	0.80	-2.0
1,642,959	+		PFLU_RS07380	0.80	-0.5
1,642,959	+		PFLU_RS07380	0.80	-1.6
1,642,959	+		PFLU_RS07380	0.80	+0.5
1,643,151	+				-0.1
1,643,151	+				+0.9
1,643,151	+				+0.3
1,643,151	+				-0.9
1,643,151	+				+0.6
1,643,151	+				+0.1
1,643,151	+				-0.6
1,643,152	-				+0.6
1,643,152	-				-0.1
1,643,152	-				+0.1
1,643,152	-				+0.4
1,643,152	-				+1.5
1,643,152	-				+0.5
1,643,152	-				+0.1
1,643,152	-				+2.3
1,643,152	-				-0.3
1,643,152	-				+0.9
1,643,152	-				-0.3
1,643,152	-				-0.7
1,643,153	+				+1.2
1,643,153	+				-2.8
1,643,153	+				+0.1
1,643,153	+				+0.7
1,643,153	+				+0.4
1,643,153	+				+0.9
1,643,153	+				+0.4
1,643,153	+				-0.4
1,643,153	+				-0.1
1,643,153	+				-0.1
1,643,153	+				-0.2
1,643,153	+				+0.7
1,643,153	+				-0.6
1,643,153	+				-0.4
1,643,153	+				-0.5
1,643,153	+				+1.2
1,643,153	+				-0.4
1,643,153	+				-0.2
1,643,154	-				-1.2
1,643,154	-				+0.2
1,643,154	-				+0.1
1,643,154	-				+0.7
1,643,154	-				+0.7
1,643,154	-				-0.5
1,643,154	-				-0.1
1,643,154	-				-0.5
1,643,154	-				+0.7
1,643,154	-				-1.0
1,643,154	-				-1.5
1,643,154	-				+0.6
1,643,154	-				-0.1
1,643,154	-				+0.1
1,643,154	-				-0.9
1,643,154	-				-1.2
1,643,154	-				+0.7
1,643,154	-				+2.1
1,643,154	-				+0.1
1,643,154	-				-0.2
1,643,154	-				+0.1
1,643,157	+				+1.7
1,643,157	+				-0.6
1,643,157	+				-1.2
1,643,157	+				+1.5
1,643,157	+				+0.2
1,643,157	+				+0.2
1,643,157	+				-0.1
1,643,157	+				+1.2
1,643,157	+				+0.4
1,643,157	+				+0.2
1,643,157	+				+1.0
1,643,158	-				+0.2
1,643,158	-				-0.0
1,643,158	-				+1.1
1,643,158	-				+0.8
1,643,158	-				-1.0
1,643,158	-				+0.1
1,643,158	-				-1.9
1,643,158	-				-0.6
1,643,158	-				-0.3
1,643,158	-				-2.1
1,643,158	-				+0.0
1,643,158	-				-0.3
1,643,158	-				-0.1
1,643,169	+				+0.5
1,643,169	+				+0.4
1,643,169	+				-0.8
1,643,169	+				-0.5
1,643,169	+				+0.4
1,643,170	-				+1.3
1,643,212	+				+0.1
1,643,212	+				+0.4
1,643,212	+				+0.1
1,643,212	+				-0.5
1,643,212	+				-1.3
1,643,212	+				-1.5
1,643,213	-				+2.7
1,643,213	-				+0.1
1,643,213	-				+0.2
1,643,213	-				-0.9
1,643,213	-				+0.8
1,643,255	+		PFLU_RS07385	0.18	-0.1
1,643,256	-		PFLU_RS07385	0.18	-0.6
1,643,256	-		PFLU_RS07385	0.18	-0.3
1,643,349	+		PFLU_RS07385	0.44	-0.2
1,643,373	+		PFLU_RS07385	0.50	+1.0
1,643,373	+		PFLU_RS07385	0.50	-0.5
1,643,373	+		PFLU_RS07385	0.50	-0.6
1,643,374	-		PFLU_RS07385	0.50	-2.0
1,643,510	+		PFLU_RS07385	0.88	-2.5
1,643,510	+		PFLU_RS07385	0.88	-0.2
1,643,510	+		PFLU_RS07385	0.88	+0.3
1,643,510	+		PFLU_RS07385	0.88	+1.1
1,643,510	+		PFLU_RS07385	0.88	-1.1
1,643,510	+		PFLU_RS07385	0.88	+0.5
1,643,510	+		PFLU_RS07385	0.88	+0.9
1,643,510	+		PFLU_RS07385	0.88	-0.1
1,643,511	-		PFLU_RS07385	0.88	-1.0
1,643,511	-		PFLU_RS07385	0.88	+1.1
1,643,511	-		PFLU_RS07385	0.88	-0.6
1,643,511	-		PFLU_RS07385	0.88	-0.7
1,643,511	-		PFLU_RS07385	0.88	-0.7
1,643,511	-		PFLU_RS07385	0.88	+1.5
1,643,511	-		PFLU_RS07385	0.88	+0.5
1,643,511	-		PFLU_RS07385	0.88	+0.3
1,643,511	-		PFLU_RS07385	0.88	-2.0
1,643,511	-		PFLU_RS07385	0.88	-0.5
1,643,514	+		PFLU_RS07385	0.89	+0.6
1,643,514	+		PFLU_RS07385	0.89	-0.9
1,643,514	+		PFLU_RS07385	0.89	-2.3
1,643,514	+		PFLU_RS07385	0.89	+0.8
1,643,514	+		PFLU_RS07385	0.89	+0.6
1,643,514	+		PFLU_RS07385	0.89	-0.6
1,643,515	-		PFLU_RS07385	0.89	-0.5
1,643,515	-		PFLU_RS07385	0.89	+0.1
1,643,515	-		PFLU_RS07385	0.89	-0.5
1,643,515	-		PFLU_RS07385	0.89	+0.7
1,643,515	-		PFLU_RS07385	0.89	+1.4
1,643,515	-		PFLU_RS07385	0.89	+0.2
1,643,515	-		PFLU_RS07385	0.89	-0.5
1,643,515	-		PFLU_RS07385	0.89	-0.4
1,643,515	-		PFLU_RS07385	0.89	+0.0
1,643,515	-		PFLU_RS07385	0.89	-0.5
1,643,515	-		PFLU_RS07385	0.89	+0.3
1,643,515	-		PFLU_RS07385	0.89	+0.7
1,643,515	-		PFLU_RS07385	0.89	+0.1
1,643,530	+				-0.9
1,643,595	+				-0.5
1,643,680	+				+0.9
1,643,681	-				-0.3
1,643,732	+				-1.5
1,643,733	-				+0.7
1,643,908	+		PFLU_RS07390	0.24	-0.1
1,643,909	-		PFLU_RS07390	0.25	+0.2
1,644,003	+		PFLU_RS07390	0.35	-0.7
1,644,003	+		PFLU_RS07390	0.35	-0.5
1,644,003	+		PFLU_RS07390	0.35	+0.5
1,644,003	+		PFLU_RS07390	0.35	+0.8
1,644,003	+		PFLU_RS07390	0.35	+0.7
1,644,003	+		PFLU_RS07390	0.35	-1.3
1,644,003	+		PFLU_RS07390	0.35	+0.5
1,644,003	+		PFLU_RS07390	0.35	-1.6
1,644,003	+		PFLU_RS07390	0.35	-1.9
1,644,003	+		PFLU_RS07390	0.35	+1.1
1,644,003	+		PFLU_RS07390	0.35	-0.0
1,644,003	+		PFLU_RS07390	0.35	+0.8
1,644,003	+		PFLU_RS07390	0.35	-1.8
1,644,003	+		PFLU_RS07390	0.35	-0.9
1,644,003	+		PFLU_RS07390	0.35	-0.2
1,644,003	+		PFLU_RS07390	0.35	-1.5
1,644,003	+		PFLU_RS07390	0.35	-0.7
1,644,004	-		PFLU_RS07390	0.35	-0.0
1,644,004	-		PFLU_RS07390	0.35	+0.1
1,644,004	-		PFLU_RS07390	0.35	+1.8
1,644,004	-		PFLU_RS07390	0.35	-0.4
1,644,004	-		PFLU_RS07390	0.35	-0.4
1,644,004	-		PFLU_RS07390	0.35	-1.3
1,644,004	-		PFLU_RS07390	0.35	-0.2
1,644,004	-		PFLU_RS07390	0.35	+0.5
1,644,004	-		PFLU_RS07390	0.35	-1.4
1,644,004	-		PFLU_RS07390	0.35	-0.9
1,644,004	-		PFLU_RS07390	0.35	+0.2
1,644,004	-		PFLU_RS07390	0.35	-0.0
1,644,004	-		PFLU_RS07390	0.35	+0.3
1,644,004	-		PFLU_RS07390	0.35	+1.0
1,644,286	+		PFLU_RS07390	0.65	+1.4
1,644,286	+		PFLU_RS07390	0.65	+1.0
1,644,394	+		PFLU_RS07390	0.76	+0.4
1,644,394	+		PFLU_RS07390	0.76	+0.9
1,644,394	+		PFLU_RS07390	0.76	+0.3
1,644,394	+		PFLU_RS07390	0.76	+0.7
1,644,394	+		PFLU_RS07390	0.76	-0.2
1,644,394	+		PFLU_RS07390	0.76	-0.4
1,644,394	+		PFLU_RS07390	0.76	-0.2
1,644,394	+		PFLU_RS07390	0.76	-2.6
1,644,395	-		PFLU_RS07390	0.76	-1.3
1,644,395	-		PFLU_RS07390	0.76	+0.0
1,644,395	-		PFLU_RS07390	0.76	+1.2
1,644,395	-		PFLU_RS07390	0.76	-0.3
1,644,395	-		PFLU_RS07390	0.76	+1.7
1,644,395	-		PFLU_RS07390	0.76	-1.0
1,644,395	-		PFLU_RS07390	0.76	+1.5
1,644,412	+		PFLU_RS07390	0.78	-1.9
1,644,412	+		PFLU_RS07390	0.78	+1.2
1,644,412	+		PFLU_RS07390	0.78	-0.0
1,644,412	+		PFLU_RS07390	0.78	-0.1
1,644,412	+		PFLU_RS07390	0.78	-0.1
1,644,413	-		PFLU_RS07390	0.78	+0.9
1,644,413	-		PFLU_RS07390	0.78	-0.1
1,644,413	-		PFLU_RS07390	0.78	+0.3
1,644,413	-		PFLU_RS07390	0.78	+1.4
1,644,413	-		PFLU_RS07390	0.78	+0.5
1,644,413	-		PFLU_RS07390	0.78	-1.6
1,644,413	-		PFLU_RS07390	0.78	+0.4
1,644,413	-		PFLU_RS07390	0.78	+0.5
1,644,413	-		PFLU_RS07390	0.78	+1.1
1,644,443	+		PFLU_RS07390	0.82	+0.7
1,644,443	+		PFLU_RS07390	0.82	-0.1
1,644,443	+		PFLU_RS07390	0.82	+0.1
1,644,443	+		PFLU_RS07390	0.82	+0.9
1,644,443	+		PFLU_RS07390	0.82	-1.1
1,644,444	-		PFLU_RS07390	0.82	-0.1
1,644,487	+		PFLU_RS07390	0.86	+0.0
1,644,487	+		PFLU_RS07390	0.86	+0.7
1,644,487	+		PFLU_RS07390	0.86	-0.6
1,644,487	+		PFLU_RS07390	0.86	+1.0
1,644,488	-		PFLU_RS07390	0.86	-1.5
1,644,488	-		PFLU_RS07390	0.86	-0.8
1,644,488	-		PFLU_RS07390	0.86	-0.0
1,644,561	-				-0.5
1,644,602	+				-1.5
1,644,603	-				+0.6
1,644,609	+				-1.2
1,644,610	-				+0.6
1,644,638	+				-1.5
1,644,650	+				+1.2
1,644,650	+				-0.2
1,644,651	-				+0.9
1,644,690	+				+1.0
1,644,690	+				+0.4
1,644,702	+				+0.7
1,644,702	+				-0.7
1,644,703	-				-1.7
1,644,714	-				+0.0
1,644,733	+				-0.4
1,644,733	+				-0.0
1,644,733	+				-1.2
1,644,733	+				-1.1
1,644,733	+				-0.5
1,644,733	+				-0.8
1,644,734	-				-0.9
1,644,734	-				-0.8
1,644,734	-				+0.4
1,644,734	-				+0.2
1,644,734	-				-0.5
1,644,734	-				+0.3
1,644,771	+				-0.7
1,644,772	-				+1.2
1,644,784	+				-0.3
1,644,917	-		PFLU_RS07395	0.14	+0.6
1,644,917	-		PFLU_RS07395	0.14	+1.1
1,644,917	-		PFLU_RS07395	0.14	+0.4
1,644,917	-		PFLU_RS07395	0.14	+0.3
1,645,233	+		PFLU_RS07395	0.40	-0.8
1,645,233	+		PFLU_RS07395	0.40	-1.5
1,645,233	+		PFLU_RS07395	0.40	-1.0
1,645,233	+		PFLU_RS07395	0.40	+0.6
1,645,233	+		PFLU_RS07395	0.40	-0.4
1,645,233	+		PFLU_RS07395	0.40	-0.4
1,645,233	+		PFLU_RS07395	0.40	-0.1
1,645,234	-		PFLU_RS07395	0.41	-0.5
1,645,234	-		PFLU_RS07395	0.41	-0.6
1,645,234	-		PFLU_RS07395	0.41	+0.4
1,645,234	-		PFLU_RS07395	0.41	-1.3
1,645,234	-		PFLU_RS07395	0.41	-0.5
1,645,234	-		PFLU_RS07395	0.41	+1.3
1,645,236	+		PFLU_RS07395	0.41	-0.0
1,645,237	-		PFLU_RS07395	0.41	+1.1
1,645,237	-		PFLU_RS07395	0.41	+0.4
1,645,256	+		PFLU_RS07395	0.42	-2.5
1,645,266	+		PFLU_RS07395	0.43	-0.8
1,645,266	+		PFLU_RS07395	0.43	+0.4
1,645,266	+		PFLU_RS07395	0.43	+0.1
1,645,266	+		PFLU_RS07395	0.43	+1.8
1,645,266	+		PFLU_RS07395	0.43	+0.7
1,645,266	+		PFLU_RS07395	0.43	-0.3
1,645,267	-		PFLU_RS07395	0.43	+0.1
1,645,518	+		PFLU_RS07395	0.64	-0.1
1,645,518	+		PFLU_RS07395	0.64	-0.3
1,645,518	+		PFLU_RS07395	0.64	+0.5
1,645,519	-		PFLU_RS07395	0.65	+0.3
1,645,519	-		PFLU_RS07395	0.65	+1.0
1,645,519	-		PFLU_RS07395	0.65	-1.4
1,645,519	-		PFLU_RS07395	0.65	+0.8
1,645,519	-		PFLU_RS07395	0.65	-0.1
1,645,519	-		PFLU_RS07395	0.65	+2.0
1,645,519	-		PFLU_RS07395	0.65	+0.4
1,645,519	-		PFLU_RS07395	0.65	+1.6