Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07085

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
1,577,235	+		PFLU_RS07080	0.24	+1.4
1,577,235	+		PFLU_RS07080	0.24	+1.2
1,577,236	-		PFLU_RS07080	0.24	+0.5
1,577,236	-		PFLU_RS07080	0.24	+0.3
1,577,236	-		PFLU_RS07080	0.24	-0.7
1,577,273	-		PFLU_RS07080	0.28	-1.0
1,577,273	-		PFLU_RS07080	0.28	+1.2
1,577,298	+		PFLU_RS07080	0.31	+0.2
1,577,298	+		PFLU_RS07080	0.31	+0.7
1,577,385	+		PFLU_RS07080	0.41	+0.9
1,577,385	+		PFLU_RS07080	0.41	-0.6
1,577,385	+		PFLU_RS07080	0.41	+1.4
1,577,385	+		PFLU_RS07080	0.41	-1.4
1,577,385	+		PFLU_RS07080	0.41	-1.2
1,577,386	-		PFLU_RS07080	0.41	+0.4
1,577,386	-		PFLU_RS07080	0.41	+0.3
1,577,386	-		PFLU_RS07080	0.41	+0.8
1,577,438	+		PFLU_RS07080	0.47	+0.2
1,577,438	+		PFLU_RS07080	0.47	-0.2
1,577,438	+		PFLU_RS07080	0.47	+0.7
1,577,438	+		PFLU_RS07080	0.47	+0.5
1,577,438	+		PFLU_RS07080	0.47	+0.2
1,577,438	+		PFLU_RS07080	0.47	+1.5
1,577,438	+		PFLU_RS07080	0.47	-0.2
1,577,439	-		PFLU_RS07080	0.47	-0.6
1,577,439	-		PFLU_RS07080	0.47	-0.5
1,577,439	-		PFLU_RS07080	0.47	-2.1
1,577,439	-		PFLU_RS07080	0.47	+1.4
1,577,475	+		PFLU_RS07080	0.51	-1.1
1,577,496	+		PFLU_RS07080	0.53	-0.2
1,577,497	-		PFLU_RS07080	0.53	-1.3
1,577,497	-		PFLU_RS07080	0.53	+0.1
1,577,699	-		PFLU_RS07080	0.76	+0.5
1,577,847	+				-1.0
1,577,847	+				+0.5
1,577,848	-				-0.9
1,577,859	+				+0.9
1,577,860	-				-0.1
1,577,879	+				+0.8
1,577,879	+				+0.2
1,577,879	+				-2.3
1,577,879	+				-0.3
1,577,879	+				-0.3
1,577,879	+				-1.6
1,577,879	+				-0.4
1,577,879	+				+0.7
1,577,879	+				+1.6
1,577,879	+				+0.2
1,577,879	+				-0.0
1,577,879	+				+0.4
1,577,879	+				-1.7
1,577,879	+				-0.0
1,577,879	+				+0.0
1,577,879	+				+0.6
1,577,880	-				-1.0
1,577,880	-				-0.2
1,577,880	-				-0.8
1,577,880	-				+0.8
1,577,880	-				-2.1
1,577,880	-				-0.3
1,577,880	-				+0.2
1,577,880	-				+0.7
1,577,880	-				-2.2
1,577,880	-				+1.2
1,577,881	+				-0.1
1,577,881	+				-0.2
1,577,913	+				-0.1
1,577,913	+				+0.0
1,577,913	+				-1.0
1,577,914	-				+0.3
1,577,961	+				+0.2
1,577,961	+				+0.7
1,577,961	+				+0.6
1,577,961	+				-1.8
1,577,961	+				-1.1
1,577,961	+				+1.0
1,577,961	+				-0.3
1,577,961	+				-0.3
1,577,961	+				-1.1
1,577,962	-				+1.3
1,577,962	-				-0.3
1,577,962	-				-0.4
1,577,962	-				+0.5
1,577,962	-				+0.7
1,577,962	-				-0.4
1,577,962	-				-1.0
1,577,962	-				+0.5
1,577,962	-				+0.9
1,577,972	+				+0.0
1,577,972	+				-1.3
1,577,973	-				+0.5
1,577,973	-				-0.3
1,577,973	-				+1.9
1,577,973	-				-1.6
1,577,973	-				+0.2
1,577,978	+				-1.2
1,577,978	+				-0.3
1,577,978	+				+0.3
1,577,979	-				+0.5
1,577,979	-				+0.4
1,577,979	-				-0.8
1,577,979	-				+0.5
1,577,979	-				+1.3
1,577,979	-				+0.1
1,577,979	-				+0.9
1,578,065	+				+0.3
1,578,106	+				+2.3
1,578,107	-				+0.7
1,578,124	+				+1.9
1,578,125	-				-1.5
1,578,125	-				-0.9
1,578,129	-				+0.7
1,578,326	-		PFLU_RS07085	0.16	-0.7
1,578,450	+		PFLU_RS07085	0.34	+0.1
1,578,450	+		PFLU_RS07085	0.34	-0.5
1,578,451	-		PFLU_RS07085	0.34	-0.3
1,578,451	-		PFLU_RS07085	0.34	+1.2
1,578,451	-		PFLU_RS07085	0.34	-1.6
1,578,451	-		PFLU_RS07085	0.34	-0.3
1,578,451	-		PFLU_RS07085	0.34	+0.1
1,578,477	+		PFLU_RS07085	0.38	-0.4
1,578,478	-		PFLU_RS07085	0.38	-0.6
1,578,478	-		PFLU_RS07085	0.38	-0.1
1,578,513	+		PFLU_RS07085	0.43	+2.2
1,578,514	-		PFLU_RS07085	0.43	-0.4
1,578,514	-		PFLU_RS07085	0.43	-1.0
1,578,514	-		PFLU_RS07085	0.43	+0.3
1,578,514	-		PFLU_RS07085	0.43	+0.4
1,578,650	+		PFLU_RS07085	0.63	+1.1
1,578,723	+		PFLU_RS07085	0.73	+0.4
1,578,724	-		PFLU_RS07085	0.73	-0.3
1,578,767	+		PFLU_RS07085	0.80	-0.2
1,578,908	+				-0.1
1,578,908	+				-0.5
1,578,908	+				+0.5
1,578,908	+				+0.6
1,578,909	-				+0.2
1,578,909	-				-0.0
1,579,028	+		PFLU_RS07090	0.57	+0.7
1,579,029	-		PFLU_RS07090	0.57	-0.4
1,579,029	-		PFLU_RS07090	0.57	-0.3
1,579,053	+		PFLU_RS07090	0.69	+2.0
1,579,053	+		PFLU_RS07090	0.69	-0.7
1,579,054	-		PFLU_RS07090	0.69	+1.2
1,579,173	+				+0.2
1,579,173	+				+0.5
1,579,173	+				+0.1
1,579,173	+				-0.7
1,579,173	+				-0.1
1,579,173	+				+0.9
1,579,173	+				-1.1
1,579,174	-				-0.6
1,579,174	-				+0.2
1,579,174	-				-0.5
1,579,174	-				-0.3
1,579,174	-				-1.1
1,579,174	-				+1.6
1,579,174	-				+0.6
1,579,174	-				+0.7
1,579,174	-				+0.5
1,579,174	-				-1.7
1,579,178	+				+0.2
1,579,178	+				-0.5
1,579,201	+				+2.0
1,579,202	-				+0.3
1,579,205	+				+0.4
1,579,205	+				+0.3
1,579,205	+				+0.9
1,579,205	+				+0.7
1,579,205	+				+0.6
1,579,205	+				-0.3
1,579,205	+				+0.1
1,579,205	+				+0.2
1,579,206	-				-0.5
1,579,206	-				-0.3
1,579,206	-				-3.3
1,579,206	-				-1.0
1,579,206	-				+0.6
1,579,206	-				-0.2
1,579,206	-				+0.9
1,579,206	-				-0.3
1,579,228	+				+0.8
1,579,228	+				+0.2
1,579,229	-				+1.2
1,579,229	-				+0.4
1,579,229	-				-0.2
1,579,491	+		PFLU_RS07095	0.18	-0.3
1,579,491	+		PFLU_RS07095	0.18	+0.3
1,579,491	+		PFLU_RS07095	0.18	-0.9
1,579,491	+		PFLU_RS07095	0.18	-0.1
1,579,491	+		PFLU_RS07095	0.18	-1.1
1,579,491	+		PFLU_RS07095	0.18	-0.4
1,579,491	+		PFLU_RS07095	0.18	+0.5
1,579,492	-		PFLU_RS07095	0.18	-0.3
1,579,492	-		PFLU_RS07095	0.18	-2.6
1,579,492	-		PFLU_RS07095	0.18	-0.4
1,579,492	-		PFLU_RS07095	0.18	+0.4
1,579,768	-		PFLU_RS07095	0.35	-0.6