Strain Fitness in Pseudomonas sp. S08-1 around OH686_20930

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
4,278,665	+				+0.2
4,278,665	+				+0.5
4,278,665	+				+0.6
4,278,665	+				-1.5
4,278,665	+				-0.3
4,278,665	+				-0.7
4,278,665	+				+0.6
4,278,665	+				+0.3
4,278,665	+				+0.8
4,278,666	-				+0.2
4,278,666	-				+0.1
4,278,666	-				+0.0
4,278,666	-				-2.1
4,278,666	-				-0.2
4,278,666	-				-1.5
4,278,666	-				-0.4
4,278,695	+				+0.6
4,278,695	+				+0.1
4,278,695	+				+0.5
4,278,695	+				-0.1
4,278,695	+				-0.1
4,278,695	+				-0.9
4,278,695	+				-0.6
4,278,695	+				-0.4
4,278,696	-				+0.2
4,278,696	-				+0.3
4,278,696	-				-0.4
4,278,696	-				-0.2
4,278,730	+				+0.3
4,278,730	+				-0.4
4,278,730	+				+0.1
4,278,730	+				-0.5
4,278,730	+				-0.6
4,278,730	+				-1.0
4,278,730	+				+0.6
4,278,730	+				-0.1
4,278,730	+				-0.6
4,278,730	+				-0.4
4,278,730	+				-0.8
4,278,731	-				-0.4
4,278,731	-				-0.6
4,278,731	-				+0.1
4,278,731	-				+0.8
4,278,731	-				-0.5
4,278,731	-				+0.9
4,278,731	-				+0.5
4,278,731	-				-0.4
4,278,731	-				-0.1
4,278,731	-				-0.2
4,278,835	+		OH686_20925	0.14	-0.2
4,278,835	+		OH686_20925	0.14	-0.3
4,278,835	+		OH686_20925	0.14	-0.7
4,278,836	-		OH686_20925	0.15	-0.7
4,278,849	+		OH686_20925	0.16	+0.2
4,278,849	+		OH686_20925	0.16	-0.3
4,278,849	+		OH686_20925	0.16	+0.4
4,278,849	+		OH686_20925	0.16	+0.1
4,278,850	-		OH686_20925	0.16	-0.3
4,278,850	-		OH686_20925	0.16	-0.2
4,278,850	-		OH686_20925	0.16	+0.1
4,278,850	-		OH686_20925	0.16	-1.0
4,278,850	-		OH686_20925	0.16	-0.3
4,278,850	-		OH686_20925	0.16	-0.4
4,278,937	+		OH686_20925	0.25	-0.3
4,278,937	+		OH686_20925	0.25	-0.1
4,278,937	+		OH686_20925	0.25	+0.2
4,278,938	-		OH686_20925	0.25	+0.8
4,278,938	-		OH686_20925	0.25	+0.0
4,278,938	-		OH686_20925	0.25	-0.7
4,278,938	-		OH686_20925	0.25	-1.5
4,279,018	+		OH686_20925	0.34	+0.5
4,279,019	-		OH686_20925	0.34	-0.4
4,279,019	-		OH686_20925	0.34	-0.2
4,279,019	-		OH686_20925	0.34	+0.1
4,279,075	-		OH686_20925	0.39	-0.2
4,279,210	+		OH686_20925	0.54	+1.9
4,279,210	+		OH686_20925	0.54	+0.2
4,279,210	+		OH686_20925	0.54	-1.3
4,279,211	-		OH686_20925	0.54	+0.6
4,279,211	-		OH686_20925	0.54	+0.1
4,279,211	-		OH686_20925	0.54	-0.2
4,279,211	-		OH686_20925	0.54	+0.1
4,279,211	-		OH686_20925	0.54	+0.7
4,279,211	-		OH686_20925	0.54	-0.3
4,279,211	-		OH686_20925	0.54	-0.1
4,279,211	-		OH686_20925	0.54	-1.1
4,279,211	-		OH686_20925	0.54	-1.0
4,279,211	-		OH686_20925	0.54	-0.8
4,279,211	-		OH686_20925	0.54	+0.0
4,279,253	+		OH686_20925	0.58	-0.1
4,279,254	-		OH686_20925	0.58	-0.3
4,279,298	+		OH686_20925	0.63	-1.7
4,279,299	-		OH686_20925	0.63	-0.0
4,279,330	+		OH686_20925	0.66	-0.7
4,279,330	+		OH686_20925	0.66	+0.8
4,279,330	+		OH686_20925	0.66	+1.2
4,279,330	+		OH686_20925	0.66	-0.0
4,279,331	-		OH686_20925	0.66	+0.5
4,279,331	-		OH686_20925	0.66	-0.1
4,279,432	+		OH686_20925	0.77	+0.1
4,279,433	-		OH686_20925	0.77	+0.1
4,279,433	-		OH686_20925	0.77	-0.4
4,279,433	-		OH686_20925	0.77	+0.2
4,279,483	+		OH686_20925	0.82	-0.4
4,279,483	+		OH686_20925	0.82	-0.9
4,279,483	+		OH686_20925	0.82	-0.8
4,279,483	+		OH686_20925	0.82	-0.1
4,279,483	+		OH686_20925	0.82	+0.1
4,279,483	+		OH686_20925	0.82	-0.8
4,279,483	+		OH686_20925	0.82	+0.8
4,279,483	+		OH686_20925	0.82	-0.4
4,279,484	-		OH686_20925	0.82	-2.8
4,279,484	-		OH686_20925	0.82	-1.0
4,279,484	-		OH686_20925	0.82	+1.0
4,279,484	-		OH686_20925	0.82	-1.3
4,279,484	-		OH686_20925	0.82	-0.4
4,279,484	-		OH686_20925	0.82	-0.4
4,279,484	-		OH686_20925	0.82	+0.3
4,279,484	-		OH686_20925	0.82	-0.3
4,279,484	-		OH686_20925	0.82	+0.6
4,279,573	+				-0.2
4,279,573	+				-0.3
4,279,573	+				-0.2
4,279,573	+				+1.3
4,279,574	-				+1.2
4,279,574	-				+0.9
4,279,574	-				-0.5
4,279,574	-				-1.3
4,279,574	-				-0.0
4,279,574	-				+0.3
4,279,582	+				-1.1
4,279,582	+				-0.6
4,279,582	+				+1.0
4,279,583	-				-0.1
4,279,659	+				+0.6
4,279,659	+				+0.0
4,279,659	+				-2.2
4,279,660	-				-0.9
4,279,660	-				-0.3
4,279,660	-				+0.3
4,279,660	-				+0.6
4,279,680	+				+0.3
4,279,680	+				+0.0
4,279,680	+				-0.6
4,279,680	+				-2.1
4,279,681	-				+0.9
4,279,681	-				-0.2
4,279,760	+		OH686_20930	0.14	+0.3
4,279,768	-		OH686_20930	0.15	-0.2
4,279,925	+		OH686_20930	0.35	-0.5
4,279,925	+		OH686_20930	0.35	-0.7
4,279,926	-		OH686_20930	0.35	+0.2
4,279,926	-		OH686_20930	0.35	+0.3
4,279,935	+		OH686_20930	0.36	-0.7
4,279,935	+		OH686_20930	0.36	+0.5
4,279,935	+		OH686_20930	0.36	+0.6
4,279,936	-		OH686_20930	0.37	-0.2
4,279,936	-		OH686_20930	0.37	+1.1
4,279,936	-		OH686_20930	0.37	-0.5
4,279,936	-		OH686_20930	0.37	+1.4
4,279,936	-		OH686_20930	0.37	+0.5
4,279,959	+		OH686_20930	0.40	-0.0
4,279,959	+		OH686_20930	0.40	-0.8
4,279,959	+		OH686_20930	0.40	-0.6
4,279,959	+		OH686_20930	0.40	+0.2
4,279,959	+		OH686_20930	0.40	-0.2
4,279,959	+		OH686_20930	0.40	+0.3
4,279,959	+		OH686_20930	0.40	+0.2
4,279,959	+		OH686_20930	0.40	-0.6
4,279,959	+		OH686_20930	0.40	+0.1
4,279,959	+		OH686_20930	0.40	-0.8
4,279,959	+		OH686_20930	0.40	-0.1
4,279,960	-		OH686_20930	0.40	+0.5
4,279,960	-		OH686_20930	0.40	+0.3
4,279,960	-		OH686_20930	0.40	-0.2
4,279,960	-		OH686_20930	0.40	-0.5
4,279,960	-		OH686_20930	0.40	-1.2
4,279,960	-		OH686_20930	0.40	-1.1
4,279,960	-		OH686_20930	0.40	-0.7
4,279,960	-		OH686_20930	0.40	-0.4
4,279,960	-		OH686_20930	0.40	-0.1
4,279,960	-		OH686_20930	0.40	+0.4
4,280,070	+		OH686_20930	0.54	-0.4
4,280,070	+		OH686_20930	0.54	-0.5
4,280,071	-		OH686_20930	0.54	-0.8
4,280,071	-		OH686_20930	0.54	-0.4
4,280,095	+		OH686_20930	0.57	+0.3
4,280,095	+		OH686_20930	0.57	+0.7
4,280,096	-		OH686_20930	0.57	+0.1
4,280,096	-		OH686_20930	0.57	-0.5
4,280,186	+		OH686_20930	0.69	-0.7
4,280,186	+		OH686_20930	0.69	+0.2
4,280,186	+		OH686_20930	0.69	-0.1
4,280,186	+		OH686_20930	0.69	+0.1
4,280,186	+		OH686_20930	0.69	-1.5
4,280,186	+		OH686_20930	0.69	+0.1
4,280,186	+		OH686_20930	0.69	-0.1
4,280,187	-		OH686_20930	0.69	-0.6
4,280,187	-		OH686_20930	0.69	+0.3
4,280,212	+		OH686_20930	0.72	-0.2
4,280,212	+		OH686_20930	0.72	+0.3
4,280,212	+		OH686_20930	0.72	+0.9
4,280,212	+		OH686_20930	0.72	+0.6
4,280,212	+		OH686_20930	0.72	+1.7
4,280,213	-		OH686_20930	0.72	+0.7
4,280,213	-		OH686_20930	0.72	-0.5
4,280,213	-		OH686_20930	0.72	+0.3
4,280,213	-		OH686_20930	0.72	+0.5
4,280,213	-		OH686_20930	0.72	+0.5
4,280,247	+		OH686_20930	0.77	-0.1
4,280,248	-		OH686_20930	0.77	-0.2
4,280,248	-		OH686_20930	0.77	+0.2
4,280,248	-		OH686_20930	0.77	-0.2
4,280,248	-		OH686_20930	0.77	+0.1
4,280,248	-		OH686_20930	0.77	-0.2
4,280,248	-		OH686_20930	0.77	+0.5
4,280,248	-		OH686_20930	0.77	+0.8
4,280,438	+				-0.5
4,280,438	+				+0.2
4,280,438	+				+1.0
4,280,439	-				+0.9
4,280,439	-				+0.2
4,280,439	-				-0.5
4,280,439	-				+0.5
4,280,464	+				+0.5
4,280,464	+				+0.1
4,280,464	+				-0.0
4,280,464	+				+1.3
4,280,465	-				+1.1
4,280,465	-				-0.2
4,280,509	+				+1.0
4,280,524	+				+0.4
4,280,524	+				+0.5
4,280,525	-				+0.2
4,280,525	-				+0.5
4,280,612	-				-0.5
4,280,612	-				-1.2
4,280,623	+				-0.6
4,280,623	+				-0.4
4,280,624	-				-1.0
4,280,624	-				-2.2
4,280,651	+				+0.1
4,280,899	+		OH686_20935	0.21	-0.4
4,280,900	-		OH686_20935	0.21	-0.4
4,280,956	-		OH686_20935	0.23	-0.5
4,280,956	-		OH686_20935	0.23	+0.4
4,280,956	-		OH686_20935	0.23	+1.1
4,280,965	+		OH686_20935	0.24	-0.9
4,280,965	+		OH686_20935	0.24	+1.0
4,280,965	+		OH686_20935	0.24	+0.0
4,280,965	+		OH686_20935	0.24	-0.5
4,280,965	+		OH686_20935	0.24	-0.2
4,280,965	+		OH686_20935	0.24	-0.9
4,280,965	+		OH686_20935	0.24	-0.5
4,280,965	+		OH686_20935	0.24	-0.4
4,280,965	+		OH686_20935	0.24	+0.7
4,280,966	-		OH686_20935	0.24	-0.2
4,280,966	-		OH686_20935	0.24	-0.2
4,280,966	-		OH686_20935	0.24	-0.1
4,280,966	-		OH686_20935	0.24	+0.8
4,280,966	-		OH686_20935	0.24	+1.2
4,280,966	-		OH686_20935	0.24	+0.6
4,280,966	-		OH686_20935	0.24	+0.3
4,280,966	-		OH686_20935	0.24	-0.4
4,280,966	-		OH686_20935	0.24	-0.4
4,280,966	-		OH686_20935	0.24	+0.0
4,280,966	-		OH686_20935	0.24	-1.1
4,280,977	+		OH686_20935	0.24	+0.5
4,280,977	+		OH686_20935	0.24	-0.3
4,280,977	+		OH686_20935	0.24	-0.1
4,280,978	-		OH686_20935	0.24	+1.2
4,280,978	-		OH686_20935	0.24	+0.7
4,280,978	-		OH686_20935	0.24	-0.4
4,280,978	-		OH686_20935	0.24	+0.0
4,280,978	-		OH686_20935	0.24	+0.6
4,280,978	-		OH686_20935	0.24	-0.1
4,280,978	-		OH686_20935	0.24	+0.5
4,281,073	+		OH686_20935	0.29	-0.7
4,281,073	+		OH686_20935	0.29	-0.1
4,281,073	+		OH686_20935	0.29	+0.2
4,281,073	+		OH686_20935	0.29	-0.6
4,281,073	+		OH686_20935	0.29	-0.7
4,281,073	+		OH686_20935	0.29	-0.7
4,281,073	+		OH686_20935	0.29	-1.0
4,281,073	+		OH686_20935	0.29	-0.4
4,281,073	+		OH686_20935	0.29	+0.3
4,281,073	+		OH686_20935	0.29	+0.3
4,281,073	+		OH686_20935	0.29	-1.3
4,281,074	-		OH686_20935	0.29	-0.2
4,281,074	-		OH686_20935	0.29	-0.1
4,281,280	+		OH686_20935	0.38	-0.0
4,281,281	-		OH686_20935	0.38	-0.1
4,281,281	-		OH686_20935	0.38	-0.8
4,281,281	-		OH686_20935	0.38	-0.5
4,281,373	+		OH686_20935	0.43	-0.1
4,281,373	+		OH686_20935	0.43	-0.5
4,281,373	+		OH686_20935	0.43	-0.1
4,281,373	+		OH686_20935	0.43	-0.7
4,281,373	+		OH686_20935	0.43	+0.4
4,281,373	+		OH686_20935	0.43	-0.1
4,281,373	+		OH686_20935	0.43	-2.8
4,281,374	-		OH686_20935	0.43	+0.5
4,281,374	-		OH686_20935	0.43	-0.1
4,281,374	-		OH686_20935	0.43	-1.2
4,281,374	-		OH686_20935	0.43	-1.2
4,281,374	-		OH686_20935	0.43	-0.2
4,281,374	-		OH686_20935	0.43	+0.1
4,281,374	-		OH686_20935	0.43	+1.2
4,281,374	-		OH686_20935	0.43	+0.3