Strain Fitness in Pseudomonas sp. S08-1 around OH686_16570

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
3,466,006	+		OH686_16565	0.85	+0.7
3,466,046	-		OH686_16565	0.86	-0.6
3,466,072	+		OH686_16565	0.87	+0.3
3,466,072	+		OH686_16565	0.87	+0.3
3,466,072	+		OH686_16565	0.87	-0.5
3,466,073	-		OH686_16565	0.87	+0.1
3,466,073	-		OH686_16565	0.87	+0.0
3,466,073	-		OH686_16565	0.87	+0.5
3,466,073	-		OH686_16565	0.87	-1.2
3,466,073	-		OH686_16565	0.87	+0.7
3,466,073	-		OH686_16565	0.87	-2.1
3,466,138	+		OH686_16565	0.89	-0.2
3,466,138	+		OH686_16565	0.89	-1.1
3,466,138	+		OH686_16565	0.89	-0.1
3,466,138	+		OH686_16565	0.89	+0.5
3,466,138	+		OH686_16565	0.89	-0.4
3,466,138	+		OH686_16565	0.89	+0.1
3,466,138	+		OH686_16565	0.89	-0.6
3,466,138	+		OH686_16565	0.89	-0.3
3,466,139	-		OH686_16565	0.89	-0.4
3,466,139	-		OH686_16565	0.89	-0.6
3,466,139	-		OH686_16565	0.89	-0.2
3,466,139	-		OH686_16565	0.89	+0.1
3,466,139	-		OH686_16565	0.89	-0.0
3,466,139	-		OH686_16565	0.89	+0.2
3,466,139	-		OH686_16565	0.89	+0.2
3,466,139	-		OH686_16565	0.89	-0.1
3,466,168	+		OH686_16565	0.90	+1.0
3,466,169	-				+0.6
3,466,169	-				+0.6
3,466,169	-				-0.3
3,466,169	-				+1.0
3,466,169	-				-0.9
3,466,169	-				-0.9
3,466,225	+				-1.7
3,466,225	+				-2.1
3,466,226	-				+1.3
3,466,226	-				-0.1
3,466,228	+				+0.3
3,466,228	+				+0.7
3,466,228	+				+0.4
3,466,228	+				-0.6
3,466,229	-				-0.5
3,466,229	-				+0.7
3,466,229	-				+0.1
3,466,229	-				-0.5
3,466,229	-				+0.1
3,466,229	-				+0.1
3,466,303	+				-0.6
3,466,303	+				+0.1
3,466,303	+				-0.3
3,466,303	+				+1.0
3,466,304	-				+0.3
3,466,304	-				-0.9
3,466,304	-				-0.1
3,466,426	+				-0.5
3,466,426	+				-0.8
3,466,426	+				+0.2
3,466,426	+				+0.5
3,466,426	+				-0.1
3,466,427	-				+1.0
3,466,427	-				-0.1
3,466,427	-				-0.1
3,466,427	-				+1.4
3,466,427	-				-0.1
3,466,462	+				+0.4
3,466,463	-				+0.2
3,466,463	-				+0.8
3,466,463	-				-1.0
3,466,463	-				-0.6
3,466,463	-				-1.1
3,466,652	+				+0.4
3,466,653	-				+0.4
3,466,666	+				+0.8
3,466,666	+				+0.1
3,466,666	+				-1.1
3,466,666	+				-0.8
3,466,666	+				+0.9
3,466,666	+				-0.2
3,466,666	+				-0.1
3,466,666	+				+0.0
3,466,666	+				+0.1
3,466,667	-				-1.4
3,466,667	-				-0.2
3,466,667	-				-0.3
3,466,674	+				-0.2
3,466,674	+				-0.2
3,466,674	+				-0.6
3,466,674	+				+0.4
3,466,674	+				-0.5
3,466,674	+				-0.5
3,466,675	-				+0.0
3,466,675	-				+0.3
3,466,675	-				+0.6
3,466,675	-				+0.7
3,466,688	+				+0.2
3,466,688	+				-0.4
3,466,688	+				+1.0
3,466,688	+				+0.3
3,466,689	-				-0.5
3,466,689	-				+0.7
3,466,689	-				-0.2
3,466,689	-				+0.7
3,466,689	-				-1.3
3,466,689	-				+0.3
3,466,689	-				+0.4
3,466,689	-				-1.4
3,466,813	-				+0.3
3,467,216	+		OH686_16570	0.35	-0.2
3,467,216	+		OH686_16570	0.35	-0.9
3,467,216	+		OH686_16570	0.35	-0.2
3,467,217	-		OH686_16570	0.35	+0.0
3,467,217	-		OH686_16570	0.35	+0.2
3,467,217	-		OH686_16570	0.35	-1.4
3,467,217	-		OH686_16570	0.35	+0.2
3,467,217	-		OH686_16570	0.35	-1.3
3,467,220	-		OH686_16570	0.35	+0.9
3,467,231	+		OH686_16570	0.36	-0.7
3,467,231	+		OH686_16570	0.36	+0.7
3,467,231	+		OH686_16570	0.36	-0.1
3,467,231	+		OH686_16570	0.36	+1.3
3,467,231	+		OH686_16570	0.36	-0.3
3,467,231	+		OH686_16570	0.36	+0.6
3,467,232	-		OH686_16570	0.36	-0.6
3,467,232	-		OH686_16570	0.36	-0.6
3,467,232	-		OH686_16570	0.36	-0.0
3,467,232	-		OH686_16570	0.36	+0.3
3,467,232	-		OH686_16570	0.36	-0.7
3,467,232	-		OH686_16570	0.36	-0.4
3,467,264	+		OH686_16570	0.39	-0.3
3,467,264	+		OH686_16570	0.39	-1.0
3,467,264	+		OH686_16570	0.39	-0.4
3,467,264	+		OH686_16570	0.39	-0.0
3,467,264	+		OH686_16570	0.39	+0.6
3,467,264	+		OH686_16570	0.39	-0.5
3,467,265	-		OH686_16570	0.39	-0.9
3,467,265	-		OH686_16570	0.39	+0.3
3,467,265	-		OH686_16570	0.39	+0.0
3,467,265	-		OH686_16570	0.39	+1.1
3,467,342	+		OH686_16570	0.45	+2.3
3,467,342	+		OH686_16570	0.45	+0.4
3,467,342	+		OH686_16570	0.45	-0.0
3,467,342	+		OH686_16570	0.45	+0.2
3,467,343	-		OH686_16570	0.45	-0.4
3,467,343	-		OH686_16570	0.45	+0.1
3,467,343	-		OH686_16570	0.45	+1.2
3,467,343	-		OH686_16570	0.45	-1.2
3,467,343	-		OH686_16570	0.45	-0.7
3,467,343	-		OH686_16570	0.45	-2.0
3,467,343	-		OH686_16570	0.45	-1.3
3,467,360	+		OH686_16570	0.46	-0.5
3,467,360	+		OH686_16570	0.46	-0.0
3,467,360	+		OH686_16570	0.46	+1.4
3,467,361	-		OH686_16570	0.46	-1.1
3,467,361	-		OH686_16570	0.46	+0.1
3,467,374	+		OH686_16570	0.47	-1.5
3,467,375	-		OH686_16570	0.48	-1.4
3,467,375	-		OH686_16570	0.48	-0.7
3,467,375	-		OH686_16570	0.48	+0.4
3,467,375	-		OH686_16570	0.48	-0.6
3,467,441	+		OH686_16570	0.53	-0.1
3,467,441	+		OH686_16570	0.53	+0.1
3,467,441	+		OH686_16570	0.53	+0.4
3,467,441	+		OH686_16570	0.53	-0.2
3,467,441	+		OH686_16570	0.53	+0.5
3,467,441	+		OH686_16570	0.53	-0.7
3,467,441	+		OH686_16570	0.53	-1.1
3,467,441	+		OH686_16570	0.53	-1.1
3,467,441	+		OH686_16570	0.53	-2.8
3,467,441	+		OH686_16570	0.53	-0.0
3,467,441	+		OH686_16570	0.53	+0.2
3,467,441	+		OH686_16570	0.53	+0.1
3,467,442	-		OH686_16570	0.53	+1.4
3,467,442	-		OH686_16570	0.53	+1.0
3,467,442	-		OH686_16570	0.53	+0.6
3,467,442	-		OH686_16570	0.53	-0.4
3,467,442	-		OH686_16570	0.53	-0.3
3,467,442	-		OH686_16570	0.53	+0.2
3,467,442	-		OH686_16570	0.53	+0.3
3,467,445	-		OH686_16570	0.53	+0.2
3,467,549	+		OH686_16570	0.62	-0.7
3,467,549	+		OH686_16570	0.62	-0.0
3,467,549	+		OH686_16570	0.62	+0.4
3,467,550	-		OH686_16570	0.62	+0.2
3,467,550	-		OH686_16570	0.62	-0.6
3,467,550	-		OH686_16570	0.62	+1.0
3,467,660	+		OH686_16570	0.71	+0.4
3,467,660	+		OH686_16570	0.71	-1.2
3,467,661	-		OH686_16570	0.71	-0.3
3,467,661	-		OH686_16570	0.71	+0.2
3,467,661	-		OH686_16570	0.71	-0.3
3,467,661	-		OH686_16570	0.71	+0.3
3,467,661	-		OH686_16570	0.71	-0.8
3,467,675	+		OH686_16570	0.72	-1.9
3,467,675	+		OH686_16570	0.72	+1.0
3,467,675	+		OH686_16570	0.72	-0.2
3,467,676	-		OH686_16570	0.72	-0.3
3,467,676	-		OH686_16570	0.72	-0.3
3,467,676	-		OH686_16570	0.72	+0.2
3,467,735	+		OH686_16570	0.77	-0.2
3,467,736	-		OH686_16570	0.77	+0.4
3,467,736	-		OH686_16570	0.77	-0.8
3,467,736	-		OH686_16570	0.77	+0.6
3,467,778	-		OH686_16570	0.80	+1.8
3,467,778	-		OH686_16570	0.80	-0.1
3,467,888	+		OH686_16570	0.89	-0.6
3,467,888	+		OH686_16570	0.89	-0.4
3,467,888	+		OH686_16570	0.89	-1.1
3,467,888	+		OH686_16570	0.89	-1.2
3,467,888	+		OH686_16570	0.89	+0.7
3,467,889	-		OH686_16570	0.89	-0.2
3,467,889	-		OH686_16570	0.89	+1.9
3,467,889	-		OH686_16570	0.89	-1.6
3,467,889	-		OH686_16570	0.89	-0.6
3,467,889	-		OH686_16570	0.89	-0.6
3,467,972	+				-0.1
3,467,973	-				+0.2
3,467,973	-				+0.3
3,468,014	+				-0.2
3,468,015	-				+0.2
3,468,020	+				-0.6
3,468,020	+				+0.5
3,468,020	+				+0.1
3,468,021	-				+0.7
3,468,021	-				+0.1
3,468,021	-				+0.4
3,468,021	-				+0.6
3,468,021	-				-1.3
3,468,059	-				-1.1
3,468,131	+				+0.1
3,468,131	+				+0.7
3,468,132	-				-0.7
3,468,132	-				-1.3
3,468,375	+		OH686_16575	0.18	+0.2
3,468,375	+		OH686_16575	0.18	-0.2
3,468,375	+		OH686_16575	0.18	-0.0
3,468,376	-		OH686_16575	0.18	-1.0
3,468,376	-		OH686_16575	0.18	+0.0
3,468,376	-		OH686_16575	0.18	+0.2
3,468,376	-		OH686_16575	0.18	+0.5
3,468,411	+		OH686_16575	0.22	+0.6
3,468,432	+		OH686_16575	0.24	-0.0
3,468,432	+		OH686_16575	0.24	+0.4
3,468,435	+		OH686_16575	0.24	+0.2
3,468,435	+		OH686_16575	0.24	-1.0
3,468,435	+		OH686_16575	0.24	+0.8
3,468,435	+		OH686_16575	0.24	-0.0
3,468,435	+		OH686_16575	0.24	-1.8
3,468,435	+		OH686_16575	0.24	+0.7
3,468,435	+		OH686_16575	0.24	+0.4
3,468,435	+		OH686_16575	0.24	-0.6
3,468,435	+		OH686_16575	0.24	-0.9
3,468,435	+		OH686_16575	0.24	-0.0
3,468,436	-		OH686_16575	0.24	+0.3
3,468,436	-		OH686_16575	0.24	-0.6
3,468,436	-		OH686_16575	0.24	+0.2
3,468,436	-		OH686_16575	0.24	-0.8
3,468,436	-		OH686_16575	0.24	-0.8
3,468,436	-		OH686_16575	0.24	+0.0
3,468,436	-		OH686_16575	0.24	+0.0
3,468,436	-		OH686_16575	0.24	+0.4
3,468,436	-		OH686_16575	0.24	+0.8
3,468,519	+		OH686_16575	0.33	-1.1
3,468,519	+		OH686_16575	0.33	+0.0
3,468,519	+		OH686_16575	0.33	+0.0
3,468,519	+		OH686_16575	0.33	-0.1
3,468,520	-		OH686_16575	0.33	+0.5
3,468,738	+		OH686_16575	0.57	-0.4
3,468,738	+		OH686_16575	0.57	-0.9
3,468,739	-		OH686_16575	0.57	+1.2
3,468,739	-		OH686_16575	0.57	+0.6
3,468,739	-		OH686_16575	0.57	-0.6
3,468,807	-		OH686_16575	0.65	-1.1
3,468,921	+		OH686_16575	0.77	-0.3
3,468,921	+		OH686_16575	0.77	-1.3
3,468,921	+		OH686_16575	0.77	+0.4
3,468,921	+		OH686_16575	0.77	-1.1
3,468,921	+		OH686_16575	0.77	-0.5
3,468,921	+		OH686_16575	0.77	-0.0
3,468,921	+		OH686_16575	0.77	+0.3
3,468,921	+		OH686_16575	0.77	-1.0
3,468,922	-		OH686_16575	0.77	-0.6
3,468,922	-		OH686_16575	0.77	-0.3
3,468,922	-		OH686_16575	0.77	-0.3
3,468,922	-		OH686_16575	0.77	+0.1
3,468,922	-		OH686_16575	0.77	+0.1
3,468,933	-		OH686_16575	0.78	-0.7