Strain Fitness in Pseudomonas sp. S08-1 around OH686_07060

Experiment: D,L-Malic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C)
1,441,880	-		OH686_07050	0.41	+0.8
1,441,880	-		OH686_07050	0.41	+0.2
1,441,880	-		OH686_07050	0.41	-0.4
1,441,888	+		OH686_07050	0.44	-0.4
1,441,958	-		OH686_07050	0.65	+0.0
1,442,107	+				+0.2
1,442,107	+				+1.0
1,442,107	+				-0.5
1,442,107	+				+0.3
1,442,107	+				+0.5
1,442,108	-				-0.8
1,442,108	-				+0.4
1,442,108	-				+0.0
1,442,359	+		OH686_07055	0.31	-0.0
1,442,360	-		OH686_07055	0.31	+0.4
1,442,360	-		OH686_07055	0.31	+0.1
1,442,488	+		OH686_07055	0.50	+0.4
1,442,488	+		OH686_07055	0.50	+0.2
1,442,488	+		OH686_07055	0.50	-0.4
1,442,489	-		OH686_07055	0.50	-0.3
1,442,489	-		OH686_07055	0.50	-0.7
1,442,524	+		OH686_07055	0.55	-0.2
1,442,525	-		OH686_07055	0.55	-1.2
1,442,618	+		OH686_07055	0.69	-0.7
1,442,618	+		OH686_07055	0.69	+0.1
1,442,618	+		OH686_07055	0.69	+1.2
1,442,618	+		OH686_07055	0.69	+2.2
1,442,618	+		OH686_07055	0.69	-0.2
1,442,618	+		OH686_07055	0.69	+0.7
1,442,618	+		OH686_07055	0.69	+0.4
1,442,619	-		OH686_07055	0.69	+0.3
1,442,619	-		OH686_07055	0.69	+0.0
1,442,619	-		OH686_07055	0.69	-0.2
1,442,619	-		OH686_07055	0.69	+0.0
1,442,619	-		OH686_07055	0.69	-0.7
1,442,619	-		OH686_07055	0.69	+1.1
1,442,619	-		OH686_07055	0.69	+1.3
1,442,619	-		OH686_07055	0.69	+1.7
1,442,619	-		OH686_07055	0.69	+1.2
1,442,862	+				-0.1
1,442,862	+				+0.3
1,442,862	+				-0.1
1,442,862	+				-0.3
1,442,862	+				+0.3
1,442,862	+				-1.1
1,442,862	+				-0.1
1,442,863	-				-0.3
1,442,880	+				-0.4
1,442,880	+				-0.2
1,442,880	+				-1.1
1,442,880	+				+0.3
1,442,881	-				+0.2
1,442,881	-				-0.3
1,442,881	-				-0.1
1,442,881	-				-2.0
1,442,881	-				+0.1
1,442,881	-				-1.3
1,442,881	-				-0.1
1,442,901	+				-0.3
1,443,001	-		OH686_07060	0.19	+0.8
1,443,001	-		OH686_07060	0.19	-0.2
1,443,129	+		OH686_07060	0.36	+1.0
1,443,129	+		OH686_07060	0.36	-0.2
1,443,129	+		OH686_07060	0.36	-1.7
1,443,129	+		OH686_07060	0.36	+0.5
1,443,129	+		OH686_07060	0.36	+1.1
1,443,129	+		OH686_07060	0.36	-0.2
1,443,129	+		OH686_07060	0.36	+0.3
1,443,130	-		OH686_07060	0.36	+1.2
1,443,130	-		OH686_07060	0.36	-0.2
1,443,130	-		OH686_07060	0.36	-1.3
1,443,130	-		OH686_07060	0.36	+1.4
1,443,151	-		OH686_07060	0.38	-1.0
1,443,303	+		OH686_07060	0.58	-0.2
1,443,303	+		OH686_07060	0.58	-0.4
1,443,303	+		OH686_07060	0.58	-0.5
1,443,303	+		OH686_07060	0.58	-1.2
1,443,304	-		OH686_07060	0.58	-0.5
1,443,304	-		OH686_07060	0.58	+1.1
1,443,304	-		OH686_07060	0.58	-0.5
1,443,306	+		OH686_07060	0.58	+0.7
1,443,306	+		OH686_07060	0.58	-0.6
1,443,306	+		OH686_07060	0.58	+2.2
1,443,306	+		OH686_07060	0.58	-0.6
1,443,306	+		OH686_07060	0.58	+0.7
1,443,306	+		OH686_07060	0.58	-0.3
1,443,306	+		OH686_07060	0.58	-0.4
1,443,306	+		OH686_07060	0.58	-0.1
1,443,307	-		OH686_07060	0.59	-0.5
1,443,307	-		OH686_07060	0.59	-0.3
1,443,307	-		OH686_07060	0.59	-0.1
1,443,307	-		OH686_07060	0.59	-0.1
1,443,307	-		OH686_07060	0.59	-0.3
1,443,307	-		OH686_07060	0.59	-0.3
1,443,309	+		OH686_07060	0.59	-1.2
1,443,309	+		OH686_07060	0.59	-0.3
1,443,309	+		OH686_07060	0.59	+0.8
1,443,310	-		OH686_07060	0.59	-0.2
1,443,310	-		OH686_07060	0.59	-1.4
1,443,310	-		OH686_07060	0.59	-0.4
1,443,310	-		OH686_07060	0.59	-1.0
1,443,310	-		OH686_07060	0.59	-0.2
1,443,310	-		OH686_07060	0.59	-0.4
1,443,310	-		OH686_07060	0.59	+1.1
1,443,310	-		OH686_07060	0.59	-0.9
1,443,720	-				+0.4
1,443,733	+				-0.8
1,443,733	+				-0.9
1,443,733	+				-0.3
1,443,733	+				+0.0
1,443,733	+				+0.5
1,443,733	+				-0.2
1,443,733	+				+0.3
1,443,733	+				-0.3
1,443,734	-				+0.3
1,443,734	-				+1.0
1,443,734	-				-0.2
1,443,734	-				-0.2
1,443,734	-				-0.7
1,443,734	-				-0.4
1,443,854	+				+1.7
1,443,855	-				-0.9
1,443,855	-				-0.0
1,443,917	+		OH686_07065	0.11	-0.3
1,443,917	+		OH686_07065	0.11	-0.4
1,443,917	+		OH686_07065	0.11	-0.3
1,443,917	+		OH686_07065	0.11	-1.2
1,443,918	-		OH686_07065	0.11	+0.7
1,443,979	-		OH686_07065	0.25	+0.1
1,443,979	-		OH686_07065	0.25	-0.0
1,443,979	-		OH686_07065	0.25	+2.5
1,444,206	+		OH686_07065	0.75	-0.2
1,444,206	+		OH686_07065	0.75	+0.5
1,444,206	+		OH686_07065	0.75	+1.5
1,444,206	+		OH686_07065	0.75	-0.3
1,444,207	-		OH686_07065	0.75	-0.4
1,444,207	-		OH686_07065	0.75	-0.7
1,444,207	-		OH686_07065	0.75	-0.3
1,444,207	-		OH686_07065	0.75	+0.7
1,444,207	-		OH686_07065	0.75	-0.2
1,444,218	+		OH686_07065	0.77	+1.4
1,444,218	+		OH686_07065	0.77	+0.1
1,444,218	+		OH686_07065	0.77	-0.9
1,444,219	-		OH686_07065	0.77	+0.3
1,444,219	-		OH686_07065	0.77	+0.3
1,444,307	+				-0.6
1,444,307	+				-0.7
1,444,308	-				-0.0
1,444,321	+				+0.1
1,444,321	+				-0.8
1,444,321	+				-0.0
1,444,321	+				-0.7
1,444,321	+				-0.1
1,444,322	-				+0.0
1,444,340	+				-0.2
1,444,389	+				+0.0
1,444,390	-				-0.8
1,444,390	-				-0.4
1,444,390	-				-0.6
1,444,390	-				-0.1
1,444,390	-				+0.4
1,444,390	-				-2.2
1,444,390	-				+0.7
1,444,390	-				-0.5
1,444,390	-				-0.2
1,444,395	+				+1.6
1,444,395	+				+0.2
1,444,395	+				-0.6
1,444,395	+				-0.2
1,444,395	+				+0.6
1,444,395	+				-0.8
1,444,395	+				-0.2
1,444,395	+				-0.3
1,444,395	+				+0.3
1,444,395	+				-0.3
1,444,395	+				-0.1
1,444,395	+				+1.1
1,444,396	-				-0.3
1,444,396	-				+1.3
1,444,396	-				-0.3
1,444,396	-				-1.2
1,444,398	+				-0.0
1,444,398	+				-2.1
1,444,398	+				-1.8
1,444,398	+				-0.7
1,444,398	+				+0.5
1,444,398	+				-0.4
1,444,398	+				-0.5
1,444,398	+				+0.0
1,444,398	+				-0.5
1,444,399	-				+0.5
1,444,399	-				+1.0
1,444,399	-				+0.4
1,444,399	-				+0.5
1,444,399	-				+1.0
1,444,399	-				-1.6
1,444,399	-				-0.6
1,444,399	-				-0.2
1,444,399	-				+0.7
1,444,446	+				+0.2
1,444,446	+				-0.4
1,444,446	+				+0.5
1,444,446	+				+0.2
1,444,446	+				+0.7
1,444,446	+				+0.9
1,444,447	-				-1.3
1,444,447	-				-0.3