Experiment: D,L-Malic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03120 and OH686_03125 are separated by 109 nucleotides OH686_03125 and OH686_03130 are separated by 149 nucleotides OH686_03130 and OH686_03135 are separated by 63 nucleotides OH686_03135 and OH686_03140 are separated by 242 nucleotides
OH686_03120: OH686_03120 - dihydroorotate dehydrogenase (fumarate), at 653,849 to 654,874
_03120
OH686_03125: OH686_03125 - hypothetical protein, at 654,984 to 655,205
_03125
OH686_03130: OH686_03130 - hypothetical protein, at 655,355 to 656,248
_03130
OH686_03135: OH686_03135 - Superfamily II DNA/RNA , SNF2 family, at 656,312 to 656,668
_03135
OH686_03140: OH686_03140 - Putative short-chain dehydrogenase, at 656,911 to 657,672
_03140
Position (kb) 655
656
657 Strain fitness (log2 ratio) -2
-1
0
1 at 654.871 kb on - strand at 654.893 kb on + strand at 654.925 kb on - strand at 654.925 kb on - strand at 654.926 kb on + strand at 654.926 kb on + strand at 654.927 kb on - strand at 654.927 kb on - strand at 654.927 kb on - strand at 654.927 kb on - strand at 654.940 kb on - strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.962 kb on + strand at 654.963 kb on - strand at 654.963 kb on - strand at 654.963 kb on - strand at 654.963 kb on - strand at 654.963 kb on - strand at 654.963 kb on - strand at 654.963 kb on - strand at 654.965 kb on + strand at 654.965 kb on + strand at 654.965 kb on + strand at 654.965 kb on + strand at 654.965 kb on + strand at 654.965 kb on + strand at 654.965 kb on + strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.966 kb on - strand at 654.986 kb on - strand at 655.052 kb on + strand, within OH686_03125 at 655.052 kb on + strand, within OH686_03125 at 655.118 kb on + strand, within OH686_03125 at 655.118 kb on + strand, within OH686_03125 at 655.118 kb on + strand, within OH686_03125 at 655.118 kb on + strand, within OH686_03125 at 655.118 kb on + strand, within OH686_03125 at 655.118 kb on + strand, within OH686_03125 at 655.119 kb on - strand, within OH686_03125 at 655.119 kb on - strand, within OH686_03125 at 655.120 kb on + strand, within OH686_03125 at 655.120 kb on + strand, within OH686_03125 at 655.120 kb on + strand, within OH686_03125 at 655.120 kb on + strand, within OH686_03125 at 655.120 kb on + strand, within OH686_03125 at 655.120 kb on + strand, within OH686_03125 at 655.121 kb on - strand, within OH686_03125 at 655.121 kb on - strand, within OH686_03125 at 655.121 kb on - strand, within OH686_03125 at 655.121 kb on - strand, within OH686_03125 at 655.121 kb on - strand, within OH686_03125 at 655.121 kb on - strand, within OH686_03125 at 655.150 kb on + strand, within OH686_03125 at 655.150 kb on + strand, within OH686_03125 at 655.150 kb on + strand, within OH686_03125 at 655.292 kb on + strand at 655.292 kb on + strand at 655.292 kb on + strand at 655.292 kb on + strand at 655.292 kb on + strand at 655.293 kb on - strand at 655.293 kb on - strand at 655.293 kb on - strand at 655.293 kb on - strand at 655.293 kb on - strand at 655.343 kb on - strand at 655.343 kb on - strand at 655.343 kb on - strand at 655.769 kb on + strand, within OH686_03130 at 655.769 kb on + strand, within OH686_03130 at 655.769 kb on + strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.770 kb on - strand, within OH686_03130 at 655.916 kb on + strand, within OH686_03130 at 655.917 kb on - strand, within OH686_03130 at 656.009 kb on + strand, within OH686_03130 at 656.009 kb on + strand, within OH686_03130 at 656.009 kb on + strand, within OH686_03130 at 656.009 kb on + strand, within OH686_03130 at 656.009 kb on + strand, within OH686_03130 at 656.010 kb on - strand, within OH686_03130 at 656.010 kb on - strand, within OH686_03130 at 656.010 kb on - strand, within OH686_03130 at 656.088 kb on - strand, within OH686_03130 at 656.214 kb on - strand at 656.255 kb on - strand at 656.273 kb on + strand at 656.273 kb on + strand at 656.274 kb on - strand at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.445 kb on + strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.446 kb on - strand, within OH686_03135 at 656.571 kb on + strand, within OH686_03135 at 656.571 kb on + strand, within OH686_03135 at 656.571 kb on + strand, within OH686_03135 at 656.571 kb on + strand, within OH686_03135 at 656.571 kb on + strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.572 kb on - strand, within OH686_03135 at 656.635 kb on + strand at 656.636 kb on - strand at 656.636 kb on - strand at 656.668 kb on + strand at 656.669 kb on - strand at 656.669 kb on - strand at 656.669 kb on - strand at 656.839 kb on - strand at 656.848 kb on - strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.978 kb on + strand at 656.979 kb on - strand at 656.979 kb on - strand at 656.979 kb on - strand at 656.979 kb on - strand at 656.979 kb on - strand at 656.979 kb on - strand at 656.979 kb on - strand at 657.233 kb on + strand, within OH686_03140 at 657.233 kb on + strand, within OH686_03140 at 657.233 kb on + strand, within OH686_03140 at 657.233 kb on + strand, within OH686_03140 at 657.233 kb on + strand, within OH686_03140 at 657.233 kb on + strand, within OH686_03140 at 657.234 kb on - strand, within OH686_03140 at 657.234 kb on - strand, within OH686_03140 at 657.243 kb on + strand, within OH686_03140 at 657.243 kb on + strand, within OH686_03140 at 657.243 kb on + strand, within OH686_03140 at 657.243 kb on + strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140 at 657.244 kb on - strand, within OH686_03140
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Malic Acid (C) remove 654,871 - -0.1 654,893 + -0.9 654,925 - -1.3 654,925 - -1.1 654,926 + -0.8 654,926 + -0.1 654,927 - -0.1 654,927 - -0.6 654,927 - -0.3 654,927 - -0.1 654,940 - -0.8 654,962 + -0.0 654,962 + +0.1 654,962 + +0.3 654,962 + -0.9 654,962 + -0.9 654,962 + -0.2 654,962 + +0.6 654,962 + +0.7 654,963 - -1.1 654,963 - +0.6 654,963 - -0.1 654,963 - +0.1 654,963 - -0.6 654,963 - +0.5 654,963 - +1.1 654,965 + -0.4 654,965 + -0.4 654,965 + +0.6 654,965 + +1.0 654,965 + +0.3 654,965 + -0.2 654,965 + -0.2 654,966 - +0.7 654,966 - -0.7 654,966 - +0.5 654,966 - -0.3 654,966 - -0.1 654,966 - -1.0 654,966 - +0.3 654,966 - -1.2 654,966 - -1.1 654,966 - +0.6 654,966 - -0.3 654,986 - -1.7 655,052 + OH686_03125 0.31 -1.0 655,052 + OH686_03125 0.31 -0.0 655,118 + OH686_03125 0.60 +0.4 655,118 + OH686_03125 0.60 +0.2 655,118 + OH686_03125 0.60 -0.1 655,118 + OH686_03125 0.60 +0.2 655,118 + OH686_03125 0.60 -0.3 655,118 + OH686_03125 0.60 -0.5 655,119 - OH686_03125 0.61 +0.5 655,119 - OH686_03125 0.61 +0.9 655,120 + OH686_03125 0.61 -1.4 655,120 + OH686_03125 0.61 -1.6 655,120 + OH686_03125 0.61 -0.1 655,120 + OH686_03125 0.61 -0.8 655,120 + OH686_03125 0.61 -1.1 655,120 + OH686_03125 0.61 -1.2 655,121 - OH686_03125 0.62 +0.0 655,121 - OH686_03125 0.62 -0.9 655,121 - OH686_03125 0.62 -0.4 655,121 - OH686_03125 0.62 -0.4 655,121 - OH686_03125 0.62 -0.4 655,121 - OH686_03125 0.62 -0.2 655,150 + OH686_03125 0.75 -1.1 655,150 + OH686_03125 0.75 -0.1 655,150 + OH686_03125 0.75 +0.8 655,292 + +0.1 655,292 + +0.9 655,292 + +1.0 655,292 + +0.4 655,292 + -1.2 655,293 - -0.1 655,293 - +0.2 655,293 - -0.7 655,293 - +0.0 655,293 - -0.4 655,343 - -0.3 655,343 - -0.3 655,343 - +0.8 655,769 + OH686_03130 0.46 -0.4 655,769 + OH686_03130 0.46 +0.1 655,769 + OH686_03130 0.46 -0.3 655,770 - OH686_03130 0.46 -0.8 655,770 - OH686_03130 0.46 +0.4 655,770 - OH686_03130 0.46 -0.2 655,770 - OH686_03130 0.46 -0.4 655,770 - OH686_03130 0.46 -2.3 655,770 - OH686_03130 0.46 -0.5 655,770 - OH686_03130 0.46 -0.9 655,770 - OH686_03130 0.46 -0.4 655,770 - OH686_03130 0.46 -0.0 655,916 + OH686_03130 0.63 +0.7 655,917 - OH686_03130 0.63 +0.7 656,009 + OH686_03130 0.73 -0.6 656,009 + OH686_03130 0.73 -0.5 656,009 + OH686_03130 0.73 +0.3 656,009 + OH686_03130 0.73 -0.0 656,009 + OH686_03130 0.73 -0.8 656,010 - OH686_03130 0.73 -0.1 656,010 - OH686_03130 0.73 +0.7 656,010 - OH686_03130 0.73 -0.4 656,088 - OH686_03130 0.82 +1.1 656,214 - +0.0 656,255 - +0.7 656,273 + -0.1 656,273 + +0.5 656,274 - +0.6 656,445 + OH686_03135 0.37 -0.4 656,445 + OH686_03135 0.37 +0.2 656,445 + OH686_03135 0.37 -0.6 656,445 + OH686_03135 0.37 -0.4 656,445 + OH686_03135 0.37 -0.9 656,445 + OH686_03135 0.37 +0.1 656,445 + OH686_03135 0.37 -0.8 656,445 + OH686_03135 0.37 -0.4 656,445 + OH686_03135 0.37 +0.6 656,445 + OH686_03135 0.37 -0.1 656,445 + OH686_03135 0.37 -0.1 656,445 + OH686_03135 0.37 -0.6 656,445 + OH686_03135 0.37 -0.2 656,445 + OH686_03135 0.37 -0.6 656,445 + OH686_03135 0.37 +0.2 656,445 + OH686_03135 0.37 -1.8 656,445 + OH686_03135 0.37 -1.4 656,445 + OH686_03135 0.37 -0.1 656,446 - OH686_03135 0.38 +0.3 656,446 - OH686_03135 0.38 +1.6 656,446 - OH686_03135 0.38 +0.1 656,446 - OH686_03135 0.38 -0.0 656,446 - OH686_03135 0.38 +1.0 656,446 - OH686_03135 0.38 -0.1 656,446 - OH686_03135 0.38 -0.3 656,446 - OH686_03135 0.38 -0.0 656,446 - OH686_03135 0.38 -0.5 656,446 - OH686_03135 0.38 -0.4 656,446 - OH686_03135 0.38 -0.3 656,446 - OH686_03135 0.38 +0.3 656,571 + OH686_03135 0.73 +0.3 656,571 + OH686_03135 0.73 +1.6 656,571 + OH686_03135 0.73 -2.0 656,571 + OH686_03135 0.73 +0.6 656,571 + OH686_03135 0.73 +1.4 656,572 - OH686_03135 0.73 +0.7 656,572 - OH686_03135 0.73 +0.5 656,572 - OH686_03135 0.73 -0.4 656,572 - OH686_03135 0.73 -0.9 656,572 - OH686_03135 0.73 -0.3 656,572 - OH686_03135 0.73 +1.1 656,572 - OH686_03135 0.73 -0.3 656,572 - OH686_03135 0.73 +0.9 656,572 - OH686_03135 0.73 +0.8 656,572 - OH686_03135 0.73 -1.1 656,635 + +0.7 656,636 - +0.2 656,636 - -1.9 656,668 + +0.5 656,669 - -0.5 656,669 - +0.2 656,669 - +0.0 656,839 - -0.1 656,848 - -0.9 656,978 + +0.3 656,978 + +0.1 656,978 + +0.0 656,978 + +0.6 656,978 + +0.4 656,978 + +0.1 656,978 + -0.6 656,978 + +0.9 656,979 - -0.9 656,979 - +1.0 656,979 - -0.4 656,979 - -0.1 656,979 - +1.0 656,979 - +0.5 656,979 - +0.7 657,233 + OH686_03140 0.42 +0.5 657,233 + OH686_03140 0.42 +0.7 657,233 + OH686_03140 0.42 -0.7 657,233 + OH686_03140 0.42 -0.0 657,233 + OH686_03140 0.42 -1.1 657,233 + OH686_03140 0.42 +0.9 657,234 - OH686_03140 0.42 +0.4 657,234 - OH686_03140 0.42 -0.7 657,243 + OH686_03140 0.44 +0.3 657,243 + OH686_03140 0.44 -0.1 657,243 + OH686_03140 0.44 -0.7 657,243 + OH686_03140 0.44 +0.6 657,244 - OH686_03140 0.44 -0.1 657,244 - OH686_03140 0.44 +1.3 657,244 - OH686_03140 0.44 -0.9 657,244 - OH686_03140 0.44 -0.1 657,244 - OH686_03140 0.44 -0.7 657,244 - OH686_03140 0.44 -1.0 657,244 - OH686_03140 0.44 +0.0 657,244 - OH686_03140 0.44 -0.3
Or see this region's nucleotide sequence