Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21645 and CA264_21650 are separated by 9 nucleotides CA264_21650 and CA264_21655 are separated by 4 nucleotides
CA264_21645: CA264_21645 - phosphoribosylpyrophosphate synthetase, at 197,431 to 198,324
_21645
CA264_21650: CA264_21650 - thymidine phosphorylase, at 198,334 to 199,827
_21650
CA264_21655: CA264_21655 - MBL fold hydrolase, at 199,832 to 201,199
_21655
Position (kb) 198
199
200 Strain fitness (log2 ratio) -2
-1
0
1
2 at 197.335 kb on + strand at 197.335 kb on + strand at 197.350 kb on + strand at 197.350 kb on + strand at 197.351 kb on - strand at 197.351 kb on - strand at 197.351 kb on - strand at 197.353 kb on + strand at 197.380 kb on + strand at 197.380 kb on + strand at 197.381 kb on - strand at 197.381 kb on - strand at 197.381 kb on - strand at 197.382 kb on + strand at 197.382 kb on + strand at 197.383 kb on - strand at 197.383 kb on - strand at 197.487 kb on + strand at 197.487 kb on + strand at 197.487 kb on + strand at 197.488 kb on - strand at 197.523 kb on + strand, within CA264_21645 at 197.623 kb on + strand, within CA264_21645 at 197.637 kb on + strand, within CA264_21645 at 197.638 kb on - strand, within CA264_21645 at 197.652 kb on + strand, within CA264_21645 at 197.659 kb on - strand, within CA264_21645 at 197.663 kb on - strand, within CA264_21645 at 197.663 kb on - strand, within CA264_21645 at 197.663 kb on - strand, within CA264_21645 at 197.663 kb on - strand, within CA264_21645 at 197.666 kb on - strand, within CA264_21645 at 197.666 kb on - strand, within CA264_21645 at 197.667 kb on + strand, within CA264_21645 at 197.667 kb on + strand, within CA264_21645 at 197.667 kb on + strand, within CA264_21645 at 197.668 kb on - strand, within CA264_21645 at 197.668 kb on - strand, within CA264_21645 at 197.688 kb on + strand, within CA264_21645 at 197.722 kb on + strand, within CA264_21645 at 197.723 kb on - strand, within CA264_21645 at 197.769 kb on - strand, within CA264_21645 at 197.801 kb on - strand, within CA264_21645 at 197.854 kb on - strand, within CA264_21645 at 197.855 kb on + strand, within CA264_21645 at 197.856 kb on - strand, within CA264_21645 at 197.856 kb on - strand, within CA264_21645 at 197.856 kb on - strand, within CA264_21645 at 197.856 kb on - strand, within CA264_21645 at 197.860 kb on - strand, within CA264_21645 at 197.860 kb on - strand, within CA264_21645 at 197.891 kb on - strand, within CA264_21645 at 197.912 kb on + strand, within CA264_21645 at 197.913 kb on - strand, within CA264_21645 at 197.941 kb on + strand, within CA264_21645 at 197.958 kb on + strand, within CA264_21645 at 197.959 kb on - strand, within CA264_21645 at 197.986 kb on + strand, within CA264_21645 at 198.036 kb on + strand, within CA264_21645 at 198.036 kb on + strand at 198.037 kb on - strand, within CA264_21645 at 198.050 kb on + strand, within CA264_21645 at 198.051 kb on - strand, within CA264_21645 at 198.051 kb on - strand, within CA264_21645 at 198.060 kb on - strand, within CA264_21645 at 198.151 kb on - strand, within CA264_21645 at 198.202 kb on + strand, within CA264_21645 at 198.202 kb on + strand, within CA264_21645 at 198.206 kb on + strand, within CA264_21645 at 198.207 kb on - strand, within CA264_21645 at 198.235 kb on - strand at 198.324 kb on + strand at 198.325 kb on - strand at 198.328 kb on + strand at 198.329 kb on - strand at 198.329 kb on - strand at 198.329 kb on - strand at 198.335 kb on + strand at 198.345 kb on + strand at 198.345 kb on + strand at 198.346 kb on - strand at 198.367 kb on + strand at 198.367 kb on + strand at 198.367 kb on + strand at 198.368 kb on + strand at 198.368 kb on - strand at 198.371 kb on + strand at 198.383 kb on + strand at 198.388 kb on + strand at 198.388 kb on + strand at 198.389 kb on - strand at 198.420 kb on - strand at 198.433 kb on + strand at 198.434 kb on - strand at 198.437 kb on - strand at 198.439 kb on + strand at 198.466 kb on + strand at 198.579 kb on + strand, within CA264_21650 at 198.603 kb on + strand, within CA264_21650 at 198.627 kb on + strand, within CA264_21650 at 198.628 kb on - strand, within CA264_21650 at 198.679 kb on + strand, within CA264_21650 at 198.734 kb on - strand, within CA264_21650 at 198.734 kb on - strand, within CA264_21650 at 198.736 kb on + strand, within CA264_21650 at 198.736 kb on + strand, within CA264_21650 at 198.737 kb on - strand, within CA264_21650 at 198.740 kb on - strand, within CA264_21650 at 198.741 kb on + strand, within CA264_21650 at 198.741 kb on + strand, within CA264_21650 at 198.783 kb on + strand, within CA264_21650 at 198.823 kb on + strand, within CA264_21650 at 198.835 kb on + strand, within CA264_21650 at 198.940 kb on + strand, within CA264_21650 at 198.940 kb on + strand, within CA264_21650 at 199.010 kb on - strand, within CA264_21650 at 199.042 kb on + strand, within CA264_21650 at 199.043 kb on - strand, within CA264_21650 at 199.168 kb on - strand, within CA264_21650 at 199.176 kb on + strand, within CA264_21650 at 199.267 kb on - strand, within CA264_21650 at 199.267 kb on - strand, within CA264_21650 at 199.274 kb on - strand, within CA264_21650 at 199.274 kb on - strand, within CA264_21650 at 199.276 kb on + strand, within CA264_21650 at 199.276 kb on + strand, within CA264_21650 at 199.276 kb on + strand, within CA264_21650 at 199.276 kb on + strand, within CA264_21650 at 199.277 kb on - strand, within CA264_21650 at 199.277 kb on - strand, within CA264_21650 at 199.278 kb on + strand, within CA264_21650 at 199.279 kb on - strand, within CA264_21650 at 199.279 kb on - strand, within CA264_21650 at 199.279 kb on - strand, within CA264_21650 at 199.279 kb on - strand, within CA264_21650 at 199.309 kb on + strand, within CA264_21650 at 199.309 kb on + strand, within CA264_21650 at 199.309 kb on + strand, within CA264_21650 at 199.310 kb on - strand, within CA264_21650 at 199.327 kb on + strand, within CA264_21650 at 199.328 kb on - strand, within CA264_21650 at 199.331 kb on - strand, within CA264_21650 at 199.331 kb on - strand, within CA264_21650 at 199.428 kb on + strand, within CA264_21650 at 199.428 kb on + strand, within CA264_21650 at 199.438 kb on + strand, within CA264_21650 at 199.438 kb on + strand, within CA264_21650 at 199.439 kb on - strand, within CA264_21650 at 199.439 kb on - strand, within CA264_21650 at 199.468 kb on + strand, within CA264_21650 at 199.468 kb on + strand, within CA264_21650 at 199.504 kb on - strand, within CA264_21650 at 199.518 kb on - strand, within CA264_21650 at 199.558 kb on + strand, within CA264_21650 at 199.559 kb on - strand, within CA264_21650 at 199.560 kb on + strand, within CA264_21650 at 199.667 kb on - strand, within CA264_21650 at 199.678 kb on + strand at 199.706 kb on - strand at 199.706 kb on - strand at 199.737 kb on + strand at 199.738 kb on - strand at 199.741 kb on + strand at 199.741 kb on + strand at 199.742 kb on - strand at 199.742 kb on - strand at 199.742 kb on - strand at 199.763 kb on + strand at 199.763 kb on + strand at 199.764 kb on - strand at 199.764 kb on - strand at 199.764 kb on - strand at 199.811 kb on - strand at 199.834 kb on - strand at 199.834 kb on - strand at 199.835 kb on + strand at 199.849 kb on + strand at 199.849 kb on + strand at 199.850 kb on - strand at 199.851 kb on + strand at 199.851 kb on + strand at 199.852 kb on - strand at 199.852 kb on - strand at 199.852 kb on - strand at 199.853 kb on + strand at 199.854 kb on - strand at 199.854 kb on - strand at 199.943 kb on + strand at 199.974 kb on - strand, within CA264_21655 at 200.173 kb on - strand, within CA264_21655 at 200.177 kb on + strand, within CA264_21655 at 200.177 kb on + strand, within CA264_21655 at 200.177 kb on + strand, within CA264_21655 at 200.178 kb on - strand, within CA264_21655 at 200.178 kb on - strand, within CA264_21655 at 200.178 kb on - strand, within CA264_21655 at 200.236 kb on + strand, within CA264_21655 at 200.239 kb on + strand, within CA264_21655 at 200.261 kb on + strand, within CA264_21655 at 200.262 kb on - strand, within CA264_21655 at 200.281 kb on + strand, within CA264_21655 at 200.346 kb on - strand, within CA264_21655 at 200.347 kb on + strand, within CA264_21655 at 200.352 kb on - strand, within CA264_21655 at 200.390 kb on + strand, within CA264_21655 at 200.537 kb on + strand, within CA264_21655 at 200.538 kb on - strand, within CA264_21655 at 200.549 kb on + strand, within CA264_21655 at 200.562 kb on + strand, within CA264_21655 at 200.562 kb on + strand, within CA264_21655 at 200.563 kb on - strand, within CA264_21655 at 200.574 kb on - strand, within CA264_21655 at 200.576 kb on - strand, within CA264_21655 at 200.614 kb on - strand, within CA264_21655 at 200.614 kb on - strand, within CA264_21655 at 200.673 kb on - strand, within CA264_21655 at 200.704 kb on + strand, within CA264_21655 at 200.704 kb on + strand, within CA264_21655 at 200.715 kb on + strand, within CA264_21655 at 200.782 kb on - strand, within CA264_21655 at 200.798 kb on + strand, within CA264_21655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 197,335 + +1.3 197,335 + +1.4 197,350 + +0.5 197,350 + -0.6 197,351 - -0.3 197,351 - +0.7 197,351 - -0.2 197,353 + -0.6 197,380 + +0.2 197,380 + +0.1 197,381 - +0.4 197,381 - -0.2 197,381 - +0.3 197,382 + +1.0 197,382 + -0.0 197,383 - +0.1 197,383 - -0.6 197,487 + -0.4 197,487 + -0.1 197,487 + +0.9 197,488 - -0.7 197,523 + CA264_21645 0.10 +0.1 197,623 + CA264_21645 0.21 -1.7 197,637 + CA264_21645 0.23 +1.6 197,638 - CA264_21645 0.23 -0.2 197,652 + CA264_21645 0.25 -0.3 197,659 - CA264_21645 0.26 +1.3 197,663 - CA264_21645 0.26 +0.1 197,663 - CA264_21645 0.26 -0.6 197,663 - CA264_21645 0.26 -0.4 197,663 - CA264_21645 0.26 -0.5 197,666 - CA264_21645 0.26 -0.8 197,666 - CA264_21645 0.26 -0.3 197,667 + CA264_21645 0.26 +0.7 197,667 + CA264_21645 0.26 +0.3 197,667 + CA264_21645 0.26 +0.2 197,668 - CA264_21645 0.27 -0.6 197,668 - CA264_21645 0.27 +0.4 197,688 + CA264_21645 0.29 +0.3 197,722 + CA264_21645 0.33 +0.5 197,723 - CA264_21645 0.33 -0.3 197,769 - CA264_21645 0.38 +0.4 197,801 - CA264_21645 0.41 -0.7 197,854 - CA264_21645 0.47 +1.2 197,855 + CA264_21645 0.47 -0.0 197,856 - CA264_21645 0.48 +0.8 197,856 - CA264_21645 0.48 -0.1 197,856 - CA264_21645 0.48 -1.6 197,856 - CA264_21645 0.48 -0.2 197,860 - CA264_21645 0.48 -0.4 197,860 - CA264_21645 0.48 -0.2 197,891 - CA264_21645 0.51 -1.0 197,912 + CA264_21645 0.54 +0.3 197,913 - CA264_21645 0.54 -0.6 197,941 + CA264_21645 0.57 -0.1 197,958 + CA264_21645 0.59 +1.6 197,959 - CA264_21645 0.59 +0.4 197,986 + CA264_21645 0.62 +0.2 198,036 + CA264_21645 0.68 +0.3 198,036 + +0.4 198,037 - CA264_21645 0.68 -0.1 198,050 + CA264_21645 0.69 -0.1 198,051 - CA264_21645 0.69 +0.3 198,051 - CA264_21645 0.69 +0.6 198,060 - CA264_21645 0.70 +0.7 198,151 - CA264_21645 0.81 +0.4 198,202 + CA264_21645 0.86 +0.5 198,202 + CA264_21645 0.86 +0.4 198,206 + CA264_21645 0.87 -0.2 198,207 - CA264_21645 0.87 +0.1 198,235 - +0.2 198,324 + +0.3 198,325 - +1.3 198,328 + +0.1 198,329 - -0.9 198,329 - +0.2 198,329 - -0.2 198,335 + -0.6 198,345 + +0.3 198,345 + +0.5 198,346 - +0.0 198,367 + -0.4 198,367 + +0.1 198,367 + +0.3 198,368 + -0.2 198,368 - -0.3 198,371 + -0.1 198,383 + -0.8 198,388 + +0.8 198,388 + -0.2 198,389 - +0.5 198,420 - +0.4 198,433 + -0.2 198,434 - +0.8 198,437 - +1.0 198,439 + +0.1 198,466 + +0.9 198,579 + CA264_21650 0.16 +0.1 198,603 + CA264_21650 0.18 +0.4 198,627 + CA264_21650 0.20 +0.6 198,628 - CA264_21650 0.20 +1.5 198,679 + CA264_21650 0.23 +1.0 198,734 - CA264_21650 0.27 -0.4 198,734 - CA264_21650 0.27 -0.3 198,736 + CA264_21650 0.27 -1.4 198,736 + CA264_21650 0.27 +0.2 198,737 - CA264_21650 0.27 -1.0 198,740 - CA264_21650 0.27 -0.3 198,741 + CA264_21650 0.27 +0.7 198,741 + CA264_21650 0.27 +1.0 198,783 + CA264_21650 0.30 -0.4 198,823 + CA264_21650 0.33 +0.0 198,835 + CA264_21650 0.34 +1.9 198,940 + CA264_21650 0.41 +1.8 198,940 + CA264_21650 0.41 +0.3 199,010 - CA264_21650 0.45 +0.4 199,042 + CA264_21650 0.47 +1.4 199,043 - CA264_21650 0.47 +0.7 199,168 - CA264_21650 0.56 +1.4 199,176 + CA264_21650 0.56 +0.2 199,267 - CA264_21650 0.62 +0.6 199,267 - CA264_21650 0.62 -1.0 199,274 - CA264_21650 0.63 -0.6 199,274 - CA264_21650 0.63 -0.8 199,276 + CA264_21650 0.63 +1.7 199,276 + CA264_21650 0.63 +0.7 199,276 + CA264_21650 0.63 +0.1 199,276 + CA264_21650 0.63 -0.0 199,277 - CA264_21650 0.63 +0.6 199,277 - CA264_21650 0.63 -0.5 199,278 + CA264_21650 0.63 +0.3 199,279 - CA264_21650 0.63 -0.4 199,279 - CA264_21650 0.63 +0.1 199,279 - CA264_21650 0.63 -1.5 199,279 - CA264_21650 0.63 +0.1 199,309 + CA264_21650 0.65 +0.1 199,309 + CA264_21650 0.65 +0.7 199,309 + CA264_21650 0.65 +2.1 199,310 - CA264_21650 0.65 -1.4 199,327 + CA264_21650 0.66 +0.3 199,328 - CA264_21650 0.67 -0.5 199,331 - CA264_21650 0.67 -0.1 199,331 - CA264_21650 0.67 -0.9 199,428 + CA264_21650 0.73 +0.3 199,428 + CA264_21650 0.73 +0.5 199,438 + CA264_21650 0.74 +1.9 199,438 + CA264_21650 0.74 +0.2 199,439 - CA264_21650 0.74 -0.3 199,439 - CA264_21650 0.74 +0.2 199,468 + CA264_21650 0.76 +0.0 199,468 + CA264_21650 0.76 +0.3 199,504 - CA264_21650 0.78 -0.7 199,518 - CA264_21650 0.79 +1.1 199,558 + CA264_21650 0.82 +1.4 199,559 - CA264_21650 0.82 -0.4 199,560 + CA264_21650 0.82 -0.1 199,667 - CA264_21650 0.89 -0.9 199,678 + +0.2 199,706 - -0.4 199,706 - -0.6 199,737 + +0.3 199,738 - -1.4 199,741 + -0.9 199,741 + +0.4 199,742 - +0.6 199,742 - -0.6 199,742 - -0.2 199,763 + +2.4 199,763 + +0.2 199,764 - -1.2 199,764 - -1.3 199,764 - -0.6 199,811 - -1.4 199,834 - -0.0 199,834 - +1.3 199,835 + +0.7 199,849 + -0.4 199,849 + +0.8 199,850 - +0.3 199,851 + +0.2 199,851 + +0.6 199,852 - -0.3 199,852 - -1.1 199,852 - +0.9 199,853 + +0.2 199,854 - +0.7 199,854 - -0.2 199,943 + +0.2 199,974 - CA264_21655 0.10 -1.4 200,173 - CA264_21655 0.25 -1.7 200,177 + CA264_21655 0.25 -0.3 200,177 + CA264_21655 0.25 +0.4 200,177 + CA264_21655 0.25 -0.4 200,178 - CA264_21655 0.25 +0.2 200,178 - CA264_21655 0.25 -0.5 200,178 - CA264_21655 0.25 -0.4 200,236 + CA264_21655 0.30 -0.8 200,239 + CA264_21655 0.30 +0.2 200,261 + CA264_21655 0.31 +0.1 200,262 - CA264_21655 0.31 +2.1 200,281 + CA264_21655 0.33 -0.6 200,346 - CA264_21655 0.38 +0.1 200,347 + CA264_21655 0.38 -0.7 200,352 - CA264_21655 0.38 +0.4 200,390 + CA264_21655 0.41 -1.7 200,537 + CA264_21655 0.52 -0.3 200,538 - CA264_21655 0.52 -0.5 200,549 + CA264_21655 0.52 -0.4 200,562 + CA264_21655 0.53 -0.1 200,562 + CA264_21655 0.53 -2.2 200,563 - CA264_21655 0.53 +0.1 200,574 - CA264_21655 0.54 -0.8 200,576 - CA264_21655 0.54 +0.3 200,614 - CA264_21655 0.57 -0.6 200,614 - CA264_21655 0.57 -1.0 200,673 - CA264_21655 0.61 -0.2 200,704 + CA264_21655 0.64 +0.5 200,704 + CA264_21655 0.64 +1.0 200,715 + CA264_21655 0.65 -0.5 200,782 - CA264_21655 0.69 -0.2 200,798 + CA264_21655 0.71 +1.3
Or see this region's nucleotide sequence