Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20215 and CA264_20220 are separated by 18 nucleotides CA264_20220 and CA264_20225 are separated by 177 nucleotides CA264_20225 and CA264_20230 are separated by 416 nucleotides CA264_20230 and CA264_20235 are separated by 168 nucleotides
CA264_20215: CA264_20215 - hypothetical protein, at 4,666,420 to 4,667,133
_20215
CA264_20220: CA264_20220 - phosphatase PAP2 family protein, at 4,667,152 to 4,667,937
_20220
CA264_20225: CA264_20225 - hypothetical protein, at 4,668,115 to 4,668,990
_20225
CA264_20230: CA264_20230 - hypothetical protein, at 4,669,407 to 4,669,598
_20230
CA264_20235: CA264_20235 - transcriptional regulator, at 4,669,767 to 4,670,159
_20235
Position (kb)
4668
4669 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4667.124 kb on + strand at 4667.131 kb on + strand at 4667.132 kb on - strand at 4667.140 kb on - strand at 4667.177 kb on + strand at 4667.193 kb on + strand at 4667.309 kb on + strand, within CA264_20220 at 4667.309 kb on + strand, within CA264_20220 at 4667.329 kb on - strand, within CA264_20220 at 4667.455 kb on + strand, within CA264_20220 at 4667.461 kb on - strand, within CA264_20220 at 4667.493 kb on + strand, within CA264_20220 at 4667.493 kb on + strand, within CA264_20220 at 4667.525 kb on + strand, within CA264_20220 at 4667.580 kb on + strand, within CA264_20220 at 4667.641 kb on + strand, within CA264_20220 at 4667.641 kb on + strand, within CA264_20220 at 4667.641 kb on + strand, within CA264_20220 at 4667.642 kb on - strand, within CA264_20220 at 4667.642 kb on - strand, within CA264_20220 at 4667.648 kb on + strand, within CA264_20220 at 4667.649 kb on - strand, within CA264_20220 at 4667.649 kb on - strand, within CA264_20220 at 4667.713 kb on - strand, within CA264_20220 at 4667.713 kb on - strand, within CA264_20220 at 4667.720 kb on + strand, within CA264_20220 at 4667.720 kb on + strand, within CA264_20220 at 4667.723 kb on - strand, within CA264_20220 at 4667.741 kb on + strand, within CA264_20220 at 4667.741 kb on + strand, within CA264_20220 at 4667.742 kb on - strand, within CA264_20220 at 4667.779 kb on + strand, within CA264_20220 at 4667.786 kb on + strand, within CA264_20220 at 4667.789 kb on + strand, within CA264_20220 at 4667.789 kb on + strand, within CA264_20220 at 4667.809 kb on + strand, within CA264_20220 at 4667.882 kb on + strand at 4667.943 kb on + strand at 4667.944 kb on - strand at 4668.031 kb on - strand at 4668.072 kb on + strand at 4668.082 kb on + strand at 4668.083 kb on - strand at 4668.083 kb on - strand at 4668.083 kb on - strand at 4668.124 kb on + strand at 4668.124 kb on + strand at 4668.125 kb on - strand at 4668.125 kb on - strand at 4668.125 kb on - strand at 4668.216 kb on + strand, within CA264_20225 at 4668.224 kb on + strand, within CA264_20225 at 4668.224 kb on + strand, within CA264_20225 at 4668.224 kb on + strand, within CA264_20225 at 4668.225 kb on - strand, within CA264_20225 at 4668.225 kb on - strand, within CA264_20225 at 4668.225 kb on - strand, within CA264_20225 at 4668.228 kb on - strand, within CA264_20225 at 4668.253 kb on + strand, within CA264_20225 at 4668.253 kb on + strand, within CA264_20225 at 4668.254 kb on - strand, within CA264_20225 at 4668.274 kb on - strand, within CA264_20225 at 4668.274 kb on - strand, within CA264_20225 at 4668.274 kb on - strand, within CA264_20225 at 4668.276 kb on - strand, within CA264_20225 at 4668.297 kb on + strand, within CA264_20225 at 4668.297 kb on + strand, within CA264_20225 at 4668.302 kb on - strand, within CA264_20225 at 4668.302 kb on - strand, within CA264_20225 at 4668.313 kb on - strand, within CA264_20225 at 4668.320 kb on - strand, within CA264_20225 at 4668.386 kb on - strand, within CA264_20225 at 4668.410 kb on + strand, within CA264_20225 at 4668.410 kb on + strand, within CA264_20225 at 4668.411 kb on - strand, within CA264_20225 at 4668.411 kb on - strand, within CA264_20225 at 4668.411 kb on - strand, within CA264_20225 at 4668.523 kb on + strand, within CA264_20225 at 4668.557 kb on + strand, within CA264_20225 at 4668.601 kb on + strand, within CA264_20225 at 4668.603 kb on + strand, within CA264_20225 at 4668.603 kb on + strand, within CA264_20225 at 4668.603 kb on + strand, within CA264_20225 at 4668.604 kb on - strand, within CA264_20225 at 4668.609 kb on + strand, within CA264_20225 at 4668.804 kb on - strand, within CA264_20225 at 4668.833 kb on + strand, within CA264_20225 at 4668.834 kb on - strand, within CA264_20225 at 4668.875 kb on + strand, within CA264_20225 at 4668.876 kb on - strand, within CA264_20225 at 4668.880 kb on + strand, within CA264_20225 at 4668.881 kb on - strand, within CA264_20225 at 4668.887 kb on - strand, within CA264_20225 at 4668.936 kb on + strand at 4668.936 kb on + strand at 4668.937 kb on - strand at 4668.981 kb on - strand at 4668.993 kb on + strand at 4669.022 kb on + strand at 4669.023 kb on - strand at 4669.023 kb on - strand at 4669.026 kb on + strand at 4669.026 kb on + strand at 4669.026 kb on + strand at 4669.027 kb on - strand at 4669.027 kb on - strand at 4669.058 kb on - strand at 4669.084 kb on + strand at 4669.116 kb on + strand at 4669.163 kb on + strand at 4669.186 kb on - strand at 4669.189 kb on + strand at 4669.189 kb on + strand at 4669.189 kb on + strand at 4669.189 kb on + strand at 4669.265 kb on + strand at 4669.269 kb on + strand at 4669.269 kb on + strand at 4669.273 kb on + strand at 4669.273 kb on + strand at 4669.274 kb on - strand at 4669.274 kb on - strand at 4669.274 kb on - strand at 4669.274 kb on - strand at 4669.274 kb on - strand at 4669.274 kb on - strand at 4669.274 kb on - strand at 4669.315 kb on + strand at 4669.315 kb on + strand at 4669.315 kb on + strand at 4669.316 kb on - strand at 4669.316 kb on - strand at 4669.317 kb on + strand at 4669.317 kb on + strand at 4669.317 kb on + strand at 4669.422 kb on - strand at 4669.422 kb on - strand at 4669.665 kb on + strand at 4669.665 kb on + strand at 4669.665 kb on + strand at 4669.665 kb on + strand at 4669.666 kb on - strand at 4669.666 kb on - strand at 4669.669 kb on + strand at 4669.670 kb on - strand at 4669.670 kb on - strand at 4669.670 kb on - strand at 4669.679 kb on + strand at 4669.679 kb on + strand at 4669.680 kb on - strand at 4669.680 kb on - strand at 4669.680 kb on - strand at 4669.682 kb on - strand at 4669.823 kb on - strand, within CA264_20235 at 4669.833 kb on - strand, within CA264_20235 at 4669.871 kb on + strand, within CA264_20235 at 4669.912 kb on + strand, within CA264_20235 at 4669.916 kb on + strand, within CA264_20235
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,667,124 + -0.1 4,667,131 + +0.7 4,667,132 - -0.1 4,667,140 - -0.3 4,667,177 + +1.5 4,667,193 + +0.0 4,667,309 + CA264_20220 0.20 +1.2 4,667,309 + CA264_20220 0.20 +0.2 4,667,329 - CA264_20220 0.23 +2.2 4,667,455 + CA264_20220 0.39 +1.2 4,667,461 - CA264_20220 0.39 +0.6 4,667,493 + CA264_20220 0.43 -0.8 4,667,493 + CA264_20220 0.43 +0.0 4,667,525 + CA264_20220 0.47 +0.7 4,667,580 + CA264_20220 0.54 +1.2 4,667,641 + CA264_20220 0.62 +0.3 4,667,641 + CA264_20220 0.62 +0.8 4,667,641 + CA264_20220 0.62 +0.8 4,667,642 - CA264_20220 0.62 +0.3 4,667,642 - CA264_20220 0.62 +0.5 4,667,648 + CA264_20220 0.63 +0.7 4,667,649 - CA264_20220 0.63 +0.4 4,667,649 - CA264_20220 0.63 +0.7 4,667,713 - CA264_20220 0.71 +1.1 4,667,713 - CA264_20220 0.71 -1.5 4,667,720 + CA264_20220 0.72 +0.6 4,667,720 + CA264_20220 0.72 +0.5 4,667,723 - CA264_20220 0.73 -0.0 4,667,741 + CA264_20220 0.75 +0.8 4,667,741 + CA264_20220 0.75 +0.2 4,667,742 - CA264_20220 0.75 +0.7 4,667,779 + CA264_20220 0.80 +0.3 4,667,786 + CA264_20220 0.81 +1.1 4,667,789 + CA264_20220 0.81 +1.6 4,667,789 + CA264_20220 0.81 -0.8 4,667,809 + CA264_20220 0.84 -0.5 4,667,882 + +0.3 4,667,943 + -0.1 4,667,944 - +0.4 4,668,031 - +0.5 4,668,072 + -0.0 4,668,082 + +0.2 4,668,083 - -0.3 4,668,083 - +0.1 4,668,083 - +0.9 4,668,124 + -0.5 4,668,124 + +1.5 4,668,125 - +0.6 4,668,125 - -0.1 4,668,125 - -0.1 4,668,216 + CA264_20225 0.12 +0.5 4,668,224 + CA264_20225 0.12 -0.1 4,668,224 + CA264_20225 0.12 -0.0 4,668,224 + CA264_20225 0.12 +0.3 4,668,225 - CA264_20225 0.13 +0.3 4,668,225 - CA264_20225 0.13 +0.0 4,668,225 - CA264_20225 0.13 -0.3 4,668,228 - CA264_20225 0.13 -0.5 4,668,253 + CA264_20225 0.16 -1.4 4,668,253 + CA264_20225 0.16 -0.3 4,668,254 - CA264_20225 0.16 +0.2 4,668,274 - CA264_20225 0.18 -0.3 4,668,274 - CA264_20225 0.18 -0.2 4,668,274 - CA264_20225 0.18 +0.9 4,668,276 - CA264_20225 0.18 -0.4 4,668,297 + CA264_20225 0.21 +0.1 4,668,297 + CA264_20225 0.21 -0.2 4,668,302 - CA264_20225 0.21 +0.1 4,668,302 - CA264_20225 0.21 -0.6 4,668,313 - CA264_20225 0.23 -0.6 4,668,320 - CA264_20225 0.23 +1.2 4,668,386 - CA264_20225 0.31 +0.1 4,668,410 + CA264_20225 0.34 +1.2 4,668,410 + CA264_20225 0.34 -0.2 4,668,411 - CA264_20225 0.34 +2.4 4,668,411 - CA264_20225 0.34 -0.1 4,668,411 - CA264_20225 0.34 -3.0 4,668,523 + CA264_20225 0.47 +0.7 4,668,557 + CA264_20225 0.50 -1.3 4,668,601 + CA264_20225 0.55 +0.3 4,668,603 + CA264_20225 0.56 +0.5 4,668,603 + CA264_20225 0.56 +0.9 4,668,603 + CA264_20225 0.56 +0.5 4,668,604 - CA264_20225 0.56 -0.1 4,668,609 + CA264_20225 0.56 +0.0 4,668,804 - CA264_20225 0.79 -0.2 4,668,833 + CA264_20225 0.82 +0.5 4,668,834 - CA264_20225 0.82 +0.2 4,668,875 + CA264_20225 0.87 -0.0 4,668,876 - CA264_20225 0.87 -1.8 4,668,880 + CA264_20225 0.87 +0.6 4,668,881 - CA264_20225 0.87 +0.2 4,668,887 - CA264_20225 0.88 +0.4 4,668,936 + -0.6 4,668,936 + -0.1 4,668,937 - -0.5 4,668,981 - -0.7 4,668,993 + +0.3 4,669,022 + -1.1 4,669,023 - +0.9 4,669,023 - +0.4 4,669,026 + +0.1 4,669,026 + -0.5 4,669,026 + +0.4 4,669,027 - -1.5 4,669,027 - +0.4 4,669,058 - +0.7 4,669,084 + +0.4 4,669,116 + +0.5 4,669,163 + -1.3 4,669,186 - +1.1 4,669,189 + +0.0 4,669,189 + +0.9 4,669,189 + +0.4 4,669,189 + +0.6 4,669,265 + -0.6 4,669,269 + -1.1 4,669,269 + -0.3 4,669,273 + -1.1 4,669,273 + -1.0 4,669,274 - -0.1 4,669,274 - +0.4 4,669,274 - -0.0 4,669,274 - +0.0 4,669,274 - +0.4 4,669,274 - +0.3 4,669,274 - -0.0 4,669,315 + +0.1 4,669,315 + -0.1 4,669,315 + -1.2 4,669,316 - -0.6 4,669,316 - -0.2 4,669,317 + -0.4 4,669,317 + +0.5 4,669,317 + -2.0 4,669,422 - +0.2 4,669,422 - -0.2 4,669,665 + +0.6 4,669,665 + -0.1 4,669,665 + +0.7 4,669,665 + -0.8 4,669,666 - +0.2 4,669,666 - +0.8 4,669,669 + +0.3 4,669,670 - +1.0 4,669,670 - -1.0 4,669,670 - -0.1 4,669,679 + +0.1 4,669,679 + -0.5 4,669,680 - +0.3 4,669,680 - +2.9 4,669,680 - +1.6 4,669,682 - +0.9 4,669,823 - CA264_20235 0.14 +0.3 4,669,833 - CA264_20235 0.17 +0.3 4,669,871 + CA264_20235 0.26 +0.1 4,669,912 + CA264_20235 0.37 +0.3 4,669,916 + CA264_20235 0.38 -0.5
Or see this region's nucleotide sequence