Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19990 and CA264_19995 are separated by 271 nucleotides CA264_19995 and CA264_20000 are separated by 393 nucleotides CA264_20000 and CA264_20005 are separated by 78 nucleotides
CA264_19990: CA264_19990 - hypothetical protein, at 4,609,347 to 4,610,702
_19990
CA264_19995: CA264_19995 - hypothetical protein, at 4,610,974 to 4,611,372
_19995
CA264_20000: CA264_20000 - cold-shock protein, at 4,611,766 to 4,611,957
_20000
CA264_20005: CA264_20005 - endonuclease/exonuclease/phosphatase, at 4,612,036 to 4,613,136
_20005
Position (kb)
4610
4611
4612 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4610.017 kb on + strand, within CA264_19990 at 4610.018 kb on - strand, within CA264_19990 at 4610.041 kb on + strand, within CA264_19990 at 4610.042 kb on - strand, within CA264_19990 at 4610.056 kb on + strand, within CA264_19990 at 4610.056 kb on + strand, within CA264_19990 at 4610.057 kb on - strand, within CA264_19990 at 4610.120 kb on - strand, within CA264_19990 at 4610.155 kb on + strand, within CA264_19990 at 4610.155 kb on + strand, within CA264_19990 at 4610.156 kb on - strand, within CA264_19990 at 4610.239 kb on + strand, within CA264_19990 at 4610.239 kb on + strand, within CA264_19990 at 4610.293 kb on + strand, within CA264_19990 at 4610.389 kb on + strand, within CA264_19990 at 4610.390 kb on - strand, within CA264_19990 at 4610.390 kb on - strand, within CA264_19990 at 4610.390 kb on - strand, within CA264_19990 at 4610.483 kb on - strand, within CA264_19990 at 4610.483 kb on - strand, within CA264_19990 at 4610.554 kb on + strand, within CA264_19990 at 4610.569 kb on + strand at 4610.569 kb on + strand at 4610.583 kb on - strand at 4610.583 kb on - strand at 4610.608 kb on + strand at 4610.609 kb on - strand at 4610.613 kb on - strand at 4610.638 kb on + strand at 4610.657 kb on - strand at 4610.831 kb on - strand at 4610.848 kb on + strand at 4610.971 kb on + strand at 4610.971 kb on + strand at 4610.971 kb on + strand at 4610.980 kb on + strand at 4611.045 kb on - strand, within CA264_19995 at 4611.236 kb on + strand, within CA264_19995 at 4611.239 kb on + strand, within CA264_19995 at 4611.240 kb on - strand, within CA264_19995 at 4611.240 kb on - strand, within CA264_19995 at 4611.335 kb on + strand at 4611.357 kb on - strand at 4611.357 kb on - strand at 4611.368 kb on - strand at 4611.448 kb on - strand at 4611.449 kb on + strand at 4611.454 kb on - strand at 4611.454 kb on - strand at 4611.468 kb on + strand at 4611.468 kb on + strand at 4611.468 kb on + strand at 4611.471 kb on - strand at 4611.471 kb on - strand at 4611.480 kb on + strand at 4611.499 kb on + strand at 4611.506 kb on - strand at 4611.527 kb on + strand at 4611.540 kb on - strand at 4611.691 kb on + strand at 4611.731 kb on + strand at 4611.777 kb on + strand at 4611.778 kb on - strand at 4611.801 kb on + strand, within CA264_20000 at 4611.974 kb on + strand at 4611.981 kb on - strand at 4612.106 kb on - strand at 4612.191 kb on + strand, within CA264_20005 at 4612.247 kb on - strand, within CA264_20005 at 4612.266 kb on - strand, within CA264_20005 at 4612.314 kb on - strand, within CA264_20005 at 4612.322 kb on + strand, within CA264_20005
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,610,017 + CA264_19990 0.49 +0.0 4,610,018 - CA264_19990 0.49 -0.1 4,610,041 + CA264_19990 0.51 +0.5 4,610,042 - CA264_19990 0.51 -0.2 4,610,056 + CA264_19990 0.52 -0.9 4,610,056 + CA264_19990 0.52 -0.4 4,610,057 - CA264_19990 0.52 -1.5 4,610,120 - CA264_19990 0.57 -0.8 4,610,155 + CA264_19990 0.60 +0.6 4,610,155 + CA264_19990 0.60 -1.7 4,610,156 - CA264_19990 0.60 -1.1 4,610,239 + CA264_19990 0.66 -0.4 4,610,239 + CA264_19990 0.66 -0.1 4,610,293 + CA264_19990 0.70 +0.2 4,610,389 + CA264_19990 0.77 -0.6 4,610,390 - CA264_19990 0.77 +0.0 4,610,390 - CA264_19990 0.77 +0.2 4,610,390 - CA264_19990 0.77 -0.1 4,610,483 - CA264_19990 0.84 +0.9 4,610,483 - CA264_19990 0.84 -0.1 4,610,554 + CA264_19990 0.89 -0.6 4,610,569 + -0.8 4,610,569 + -0.9 4,610,583 - -0.2 4,610,583 - +2.9 4,610,608 + +0.4 4,610,609 - -0.3 4,610,613 - +1.5 4,610,638 + -0.3 4,610,657 - -0.4 4,610,831 - -0.6 4,610,848 + +0.1 4,610,971 + -2.4 4,610,971 + -1.3 4,610,971 + -0.5 4,610,980 + -0.3 4,611,045 - CA264_19995 0.18 -1.0 4,611,236 + CA264_19995 0.66 +0.2 4,611,239 + CA264_19995 0.66 -1.0 4,611,240 - CA264_19995 0.67 +0.2 4,611,240 - CA264_19995 0.67 -0.4 4,611,335 + +1.5 4,611,357 - +0.0 4,611,357 - -0.0 4,611,368 - -0.4 4,611,448 - -0.5 4,611,449 + -0.3 4,611,454 - -0.1 4,611,454 - +1.1 4,611,468 + +0.2 4,611,468 + -0.4 4,611,468 + +0.5 4,611,471 - -1.6 4,611,471 - -0.6 4,611,480 + -0.0 4,611,499 + -0.1 4,611,506 - +1.4 4,611,527 + -0.8 4,611,540 - -1.4 4,611,691 + -0.7 4,611,731 + +0.2 4,611,777 + -0.6 4,611,778 - -0.4 4,611,801 + CA264_20000 0.18 -1.8 4,611,974 + -0.9 4,611,981 - -0.6 4,612,106 - -0.5 4,612,191 + CA264_20005 0.14 -0.4 4,612,247 - CA264_20005 0.19 -1.4 4,612,266 - CA264_20005 0.21 +1.9 4,612,314 - CA264_20005 0.25 -0.6 4,612,322 + CA264_20005 0.26 -1.6
Or see this region's nucleotide sequence