Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19180 and CA264_19185 are separated by 166 nucleotides CA264_19185 and CA264_19190 are separated by 130 nucleotides CA264_19190 and CA264_19195 are separated by 29 nucleotides
CA264_19180: CA264_19180 - cell wall anchor protein, at 4,455,094 to 4,455,789
_19180
CA264_19185: CA264_19185 - adenosylhomocysteinase, at 4,455,956 to 4,457,263
_19185
CA264_19190: CA264_19190 - DNA-binding response regulator, at 4,457,394 to 4,458,140
_19190
CA264_19195: CA264_19195 - hypothetical protein, at 4,458,170 to 4,461,142
_19195
Position (kb)
4455
4456
4457
4458 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4454.969 kb on - strand at 4454.990 kb on - strand at 4454.990 kb on - strand at 4454.990 kb on - strand at 4454.990 kb on - strand at 4454.990 kb on - strand at 4454.990 kb on - strand at 4454.994 kb on - strand at 4455.006 kb on + strand at 4455.247 kb on + strand, within CA264_19180 at 4455.248 kb on - strand, within CA264_19180 at 4455.286 kb on + strand, within CA264_19180 at 4455.305 kb on - strand, within CA264_19180 at 4455.305 kb on - strand, within CA264_19180 at 4455.337 kb on - strand, within CA264_19180 at 4455.341 kb on + strand, within CA264_19180 at 4455.341 kb on + strand, within CA264_19180 at 4455.342 kb on - strand, within CA264_19180 at 4455.342 kb on - strand, within CA264_19180 at 4455.419 kb on + strand, within CA264_19180 at 4455.419 kb on + strand, within CA264_19180 at 4455.420 kb on - strand, within CA264_19180 at 4455.606 kb on + strand, within CA264_19180 at 4455.606 kb on + strand, within CA264_19180 at 4455.607 kb on - strand, within CA264_19180 at 4455.614 kb on + strand, within CA264_19180 at 4455.628 kb on + strand, within CA264_19180 at 4455.628 kb on + strand, within CA264_19180 at 4455.629 kb on - strand, within CA264_19180 at 4455.629 kb on - strand, within CA264_19180 at 4455.804 kb on + strand at 4455.804 kb on + strand at 4455.893 kb on + strand at 4455.894 kb on - strand at 4455.894 kb on - strand at 4455.896 kb on + strand at 4457.262 kb on - strand at 4457.284 kb on + strand at 4457.369 kb on + strand at 4457.381 kb on + strand at 4457.381 kb on + strand at 4457.381 kb on + strand at 4457.382 kb on - strand at 4457.397 kb on + strand at 4457.397 kb on + strand at 4457.399 kb on + strand at 4457.399 kb on + strand at 4457.399 kb on + strand at 4457.400 kb on - strand at 4457.400 kb on - strand at 4457.411 kb on + strand at 4457.411 kb on + strand at 4457.412 kb on - strand at 4457.431 kb on + strand at 4457.432 kb on - strand at 4457.432 kb on - strand at 4457.493 kb on + strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.494 kb on - strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.555 kb on + strand, within CA264_19190 at 4457.556 kb on - strand, within CA264_19190 at 4457.556 kb on - strand, within CA264_19190 at 4457.583 kb on + strand, within CA264_19190 at 4457.584 kb on - strand, within CA264_19190 at 4457.590 kb on + strand, within CA264_19190 at 4457.591 kb on - strand, within CA264_19190 at 4457.612 kb on + strand, within CA264_19190 at 4457.620 kb on + strand, within CA264_19190 at 4457.620 kb on + strand, within CA264_19190 at 4457.682 kb on + strand, within CA264_19190 at 4457.698 kb on + strand, within CA264_19190 at 4457.709 kb on + strand, within CA264_19190 at 4457.769 kb on - strand, within CA264_19190 at 4457.902 kb on + strand, within CA264_19190 at 4457.903 kb on - strand, within CA264_19190 at 4457.907 kb on - strand, within CA264_19190 at 4457.975 kb on + strand, within CA264_19190 at 4457.976 kb on - strand, within CA264_19190 at 4458.021 kb on + strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.022 kb on - strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.023 kb on + strand, within CA264_19190 at 4458.024 kb on - strand, within CA264_19190 at 4458.024 kb on - strand, within CA264_19190 at 4458.042 kb on + strand, within CA264_19190 at 4458.043 kb on - strand, within CA264_19190 at 4458.043 kb on - strand, within CA264_19190 at 4458.147 kb on - strand at 4458.261 kb on - strand at 4458.263 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,454,969 - -0.5 4,454,990 - -0.6 4,454,990 - +0.3 4,454,990 - +0.0 4,454,990 - +0.3 4,454,990 - +0.1 4,454,990 - -0.8 4,454,994 - -1.3 4,455,006 + -0.6 4,455,247 + CA264_19180 0.22 -0.6 4,455,248 - CA264_19180 0.22 +0.3 4,455,286 + CA264_19180 0.28 -0.5 4,455,305 - CA264_19180 0.30 +0.2 4,455,305 - CA264_19180 0.30 +0.8 4,455,337 - CA264_19180 0.35 -0.0 4,455,341 + CA264_19180 0.35 -0.4 4,455,341 + CA264_19180 0.35 -1.5 4,455,342 - CA264_19180 0.36 +0.5 4,455,342 - CA264_19180 0.36 +0.4 4,455,419 + CA264_19180 0.47 +0.5 4,455,419 + CA264_19180 0.47 +0.7 4,455,420 - CA264_19180 0.47 -0.4 4,455,606 + CA264_19180 0.74 -0.5 4,455,606 + CA264_19180 0.74 -1.7 4,455,607 - CA264_19180 0.74 +0.7 4,455,614 + CA264_19180 0.75 -0.7 4,455,628 + CA264_19180 0.77 -1.0 4,455,628 + CA264_19180 0.77 +0.0 4,455,629 - CA264_19180 0.77 +1.9 4,455,629 - CA264_19180 0.77 +0.3 4,455,804 + -1.4 4,455,804 + +0.9 4,455,893 + -0.5 4,455,894 - -2.1 4,455,894 - +0.4 4,455,896 + -0.3 4,457,262 - +0.6 4,457,284 + -1.2 4,457,369 + +0.5 4,457,381 + -0.5 4,457,381 + -0.9 4,457,381 + -1.1 4,457,382 - -0.1 4,457,397 + +1.0 4,457,397 + +0.1 4,457,399 + +0.6 4,457,399 + -0.2 4,457,399 + -0.4 4,457,400 - -0.3 4,457,400 - -0.9 4,457,411 + +0.0 4,457,411 + -0.0 4,457,412 - +0.4 4,457,431 + +1.3 4,457,432 - -1.4 4,457,432 - -0.8 4,457,493 + CA264_19190 0.13 -0.7 4,457,494 - CA264_19190 0.13 +0.1 4,457,494 - CA264_19190 0.13 -1.0 4,457,494 - CA264_19190 0.13 -0.3 4,457,555 + CA264_19190 0.22 -0.4 4,457,555 + CA264_19190 0.22 -1.5 4,457,555 + CA264_19190 0.22 +0.8 4,457,555 + CA264_19190 0.22 +1.5 4,457,555 + CA264_19190 0.22 -0.4 4,457,556 - CA264_19190 0.22 -1.1 4,457,556 - CA264_19190 0.22 -1.0 4,457,583 + CA264_19190 0.25 +0.4 4,457,584 - CA264_19190 0.25 +1.5 4,457,590 + CA264_19190 0.26 -0.3 4,457,591 - CA264_19190 0.26 +0.4 4,457,612 + CA264_19190 0.29 -0.6 4,457,620 + CA264_19190 0.30 -0.3 4,457,620 + CA264_19190 0.30 +1.4 4,457,682 + CA264_19190 0.39 -0.5 4,457,698 + CA264_19190 0.41 -0.1 4,457,709 + CA264_19190 0.42 +0.3 4,457,769 - CA264_19190 0.50 -0.0 4,457,902 + CA264_19190 0.68 -0.6 4,457,903 - CA264_19190 0.68 -1.4 4,457,907 - CA264_19190 0.69 +0.3 4,457,975 + CA264_19190 0.78 +2.3 4,457,976 - CA264_19190 0.78 -0.6 4,458,021 + CA264_19190 0.84 -0.8 4,458,022 - CA264_19190 0.84 -0.7 4,458,022 - CA264_19190 0.84 +0.1 4,458,022 - CA264_19190 0.84 +0.4 4,458,022 - CA264_19190 0.84 -0.2 4,458,023 + CA264_19190 0.84 +0.7 4,458,023 + CA264_19190 0.84 +1.0 4,458,023 + CA264_19190 0.84 +0.2 4,458,024 - CA264_19190 0.84 +0.3 4,458,024 - CA264_19190 0.84 +0.6 4,458,042 + CA264_19190 0.87 -0.3 4,458,043 - CA264_19190 0.87 +0.0 4,458,043 - CA264_19190 0.87 -0.1 4,458,147 - +0.6 4,458,261 - -0.5 4,458,263 + +0.4
Or see this region's nucleotide sequence