Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18635 and CA264_18640 are separated by 83 nucleotides CA264_18640 and CA264_18645 are separated by 145 nucleotides CA264_18645 and CA264_18650 are separated by 69 nucleotides CA264_18650 and CA264_18655 are separated by 169 nucleotides
CA264_18635: CA264_18635 - phosphoribosylglycinamide formyltransferase, at 4,333,650 to 4,334,237
_18635
CA264_18640: CA264_18640 - ATPase, at 4,334,321 to 4,334,704
_18640
CA264_18645: CA264_18645 - haloacid dehalogenase, at 4,334,850 to 4,335,674
_18645
CA264_18650: CA264_18650 - thioesterase, at 4,335,744 to 4,336,178
_18650
CA264_18655: CA264_18655 - transcriptional repressor, at 4,336,348 to 4,336,770
_18655
Position (kb)
4334
4335
4336 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4333.891 kb on + strand, within CA264_18635 at 4333.891 kb on + strand, within CA264_18635 at 4333.892 kb on - strand, within CA264_18635 at 4333.892 kb on - strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4333.914 kb on + strand, within CA264_18635 at 4334.102 kb on - strand, within CA264_18635 at 4334.228 kb on + strand at 4334.229 kb on - strand at 4334.252 kb on - strand at 4334.267 kb on - strand at 4334.276 kb on + strand at 4334.283 kb on + strand at 4334.284 kb on - strand at 4334.284 kb on - strand at 4334.304 kb on + strand at 4334.304 kb on + strand at 4334.358 kb on + strand at 4334.440 kb on - strand, within CA264_18640 at 4334.590 kb on + strand, within CA264_18640 at 4334.652 kb on + strand, within CA264_18640 at 4334.652 kb on + strand, within CA264_18640 at 4334.682 kb on + strand at 4334.685 kb on + strand at 4334.712 kb on + strand at 4334.712 kb on + strand at 4334.713 kb on - strand at 4334.713 kb on - strand at 4334.722 kb on + strand at 4334.722 kb on + strand at 4334.723 kb on - strand at 4334.723 kb on - strand at 4334.733 kb on + strand at 4334.734 kb on - strand at 4334.777 kb on + strand at 4334.780 kb on - strand at 4334.804 kb on + strand at 4334.804 kb on + strand at 4334.809 kb on + strand at 4334.809 kb on + strand at 4334.832 kb on - strand at 4334.834 kb on + strand at 4334.838 kb on + strand at 4334.839 kb on - strand at 4334.839 kb on - strand at 4334.839 kb on - strand at 4334.839 kb on - strand at 4334.869 kb on - strand at 4334.870 kb on + strand at 4334.871 kb on - strand at 4334.880 kb on + strand at 4334.892 kb on + strand at 4334.892 kb on + strand at 4334.892 kb on + strand at 4334.986 kb on - strand, within CA264_18645 at 4334.986 kb on - strand, within CA264_18645 at 4334.995 kb on + strand, within CA264_18645 at 4334.996 kb on - strand, within CA264_18645 at 4335.035 kb on + strand, within CA264_18645 at 4335.036 kb on - strand, within CA264_18645 at 4335.104 kb on - strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.142 kb on + strand, within CA264_18645 at 4335.143 kb on - strand, within CA264_18645 at 4335.143 kb on - strand, within CA264_18645 at 4335.243 kb on + strand, within CA264_18645 at 4335.325 kb on + strand, within CA264_18645 at 4335.326 kb on - strand, within CA264_18645 at 4335.343 kb on + strand, within CA264_18645 at 4335.408 kb on + strand, within CA264_18645 at 4335.409 kb on - strand, within CA264_18645 at 4335.409 kb on - strand, within CA264_18645 at 4335.466 kb on + strand, within CA264_18645 at 4335.467 kb on - strand, within CA264_18645 at 4335.467 kb on - strand, within CA264_18645 at 4335.476 kb on + strand, within CA264_18645 at 4335.580 kb on + strand, within CA264_18645 at 4335.646 kb on - strand at 4335.646 kb on - strand at 4335.646 kb on - strand at 4335.712 kb on + strand at 4335.713 kb on - strand at 4335.718 kb on + strand at 4335.718 kb on + strand at 4335.719 kb on - strand at 4335.736 kb on - strand at 4335.825 kb on + strand, within CA264_18650 at 4335.838 kb on - strand, within CA264_18650 at 4335.841 kb on - strand, within CA264_18650 at 4335.846 kb on - strand, within CA264_18650 at 4335.919 kb on - strand, within CA264_18650 at 4336.007 kb on + strand, within CA264_18650 at 4336.008 kb on - strand, within CA264_18650 at 4336.008 kb on - strand, within CA264_18650 at 4336.057 kb on + strand, within CA264_18650 at 4336.057 kb on + strand, within CA264_18650 at 4336.057 kb on + strand, within CA264_18650 at 4336.087 kb on + strand, within CA264_18650 at 4336.087 kb on + strand, within CA264_18650 at 4336.104 kb on - strand, within CA264_18650 at 4336.179 kb on - strand at 4336.179 kb on - strand at 4336.314 kb on - strand at 4336.315 kb on + strand at 4336.316 kb on - strand at 4336.319 kb on + strand at 4336.320 kb on - strand at 4336.320 kb on - strand at 4336.322 kb on - strand at 4336.326 kb on - strand at 4336.330 kb on - strand at 4336.337 kb on + strand at 4336.441 kb on + strand, within CA264_18655 at 4336.441 kb on + strand, within CA264_18655 at 4336.442 kb on - strand, within CA264_18655 at 4336.583 kb on - strand, within CA264_18655 at 4336.617 kb on - strand, within CA264_18655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,333,891 + CA264_18635 0.41 -1.7 4,333,891 + CA264_18635 0.41 -0.6 4,333,892 - CA264_18635 0.41 -1.6 4,333,892 - CA264_18635 0.41 -0.1 4,333,914 + CA264_18635 0.45 -1.6 4,333,914 + CA264_18635 0.45 +0.0 4,333,914 + CA264_18635 0.45 -0.6 4,333,914 + CA264_18635 0.45 -0.2 4,334,102 - CA264_18635 0.77 -1.4 4,334,228 + -0.2 4,334,229 - +0.6 4,334,252 - -0.4 4,334,267 - -0.2 4,334,276 + +0.0 4,334,283 + +0.5 4,334,284 - +0.9 4,334,284 - -0.2 4,334,304 + +0.2 4,334,304 + -1.3 4,334,358 + -0.9 4,334,440 - CA264_18640 0.31 -1.2 4,334,590 + CA264_18640 0.70 -0.0 4,334,652 + CA264_18640 0.86 +0.7 4,334,652 + CA264_18640 0.86 -1.2 4,334,682 + +0.3 4,334,685 + +0.3 4,334,712 + +1.4 4,334,712 + +0.3 4,334,713 - +0.2 4,334,713 - -0.2 4,334,722 + -0.6 4,334,722 + -0.4 4,334,723 - -0.8 4,334,723 - -0.1 4,334,733 + -0.1 4,334,734 - -0.6 4,334,777 + +0.0 4,334,780 - -0.5 4,334,804 + -0.6 4,334,804 + -0.4 4,334,809 + -0.4 4,334,809 + +0.5 4,334,832 - -0.5 4,334,834 + +0.1 4,334,838 + -1.2 4,334,839 - +0.8 4,334,839 - -0.4 4,334,839 - -0.1 4,334,839 - +0.9 4,334,869 - -0.8 4,334,870 + -1.0 4,334,871 - -0.7 4,334,880 + -1.6 4,334,892 + +0.9 4,334,892 + -2.1 4,334,892 + -0.4 4,334,986 - CA264_18645 0.16 +0.9 4,334,986 - CA264_18645 0.16 -0.3 4,334,995 + CA264_18645 0.18 +0.8 4,334,996 - CA264_18645 0.18 -0.5 4,335,035 + CA264_18645 0.22 -2.2 4,335,036 - CA264_18645 0.23 -1.0 4,335,104 - CA264_18645 0.31 -0.5 4,335,142 + CA264_18645 0.35 -0.5 4,335,142 + CA264_18645 0.35 +0.1 4,335,142 + CA264_18645 0.35 -0.3 4,335,142 + CA264_18645 0.35 -0.4 4,335,142 + CA264_18645 0.35 -0.3 4,335,143 - CA264_18645 0.36 -1.0 4,335,143 - CA264_18645 0.36 -1.0 4,335,243 + CA264_18645 0.48 +0.1 4,335,325 + CA264_18645 0.58 -0.1 4,335,326 - CA264_18645 0.58 +0.9 4,335,343 + CA264_18645 0.60 -0.2 4,335,408 + CA264_18645 0.68 +0.6 4,335,409 - CA264_18645 0.68 +0.2 4,335,409 - CA264_18645 0.68 -0.2 4,335,466 + CA264_18645 0.75 -0.6 4,335,467 - CA264_18645 0.75 +0.7 4,335,467 - CA264_18645 0.75 +2.2 4,335,476 + CA264_18645 0.76 +0.4 4,335,580 + CA264_18645 0.88 +0.8 4,335,646 - +0.9 4,335,646 - +0.9 4,335,646 - +1.9 4,335,712 + -1.2 4,335,713 - +1.4 4,335,718 + -1.5 4,335,718 + +0.1 4,335,719 - +0.6 4,335,736 - +0.5 4,335,825 + CA264_18650 0.19 -0.2 4,335,838 - CA264_18650 0.22 +0.8 4,335,841 - CA264_18650 0.22 +0.0 4,335,846 - CA264_18650 0.23 +0.9 4,335,919 - CA264_18650 0.40 -0.2 4,336,007 + CA264_18650 0.60 +1.2 4,336,008 - CA264_18650 0.61 +0.4 4,336,008 - CA264_18650 0.61 -0.4 4,336,057 + CA264_18650 0.72 +0.2 4,336,057 + CA264_18650 0.72 +0.7 4,336,057 + CA264_18650 0.72 +0.7 4,336,087 + CA264_18650 0.79 +0.4 4,336,087 + CA264_18650 0.79 +0.4 4,336,104 - CA264_18650 0.83 -0.2 4,336,179 - -0.1 4,336,179 - +0.0 4,336,314 - +0.9 4,336,315 + -0.1 4,336,316 - +1.4 4,336,319 + -1.1 4,336,320 - +0.6 4,336,320 - +1.7 4,336,322 - +0.3 4,336,326 - +0.2 4,336,330 - -0.9 4,336,337 + -0.1 4,336,441 + CA264_18655 0.22 +2.5 4,336,441 + CA264_18655 0.22 +0.4 4,336,442 - CA264_18655 0.22 -1.2 4,336,583 - CA264_18655 0.56 -1.2 4,336,617 - CA264_18655 0.64 -1.5
Or see this region's nucleotide sequence