Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18565 and CA264_18570 are separated by 138 nucleotides CA264_18570 and CA264_18575 overlap by 4 nucleotides CA264_18575 and CA264_18580 are separated by 64 nucleotides
CA264_18565: CA264_18565 - hypothetical protein, at 4,319,144 to 4,320,349
_18565
CA264_18570: CA264_18570 - DNA-binding protein, at 4,320,488 to 4,320,793
_18570
CA264_18575: CA264_18575 - hypothetical protein, at 4,320,790 to 4,321,323
_18575
CA264_18580: CA264_18580 - hypothetical protein, at 4,321,388 to 4,322,287
_18580
Position (kb)
4320
4321 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4319.550 kb on + strand, within CA264_18565 at 4319.551 kb on - strand, within CA264_18565 at 4319.552 kb on + strand, within CA264_18565 at 4319.553 kb on - strand, within CA264_18565 at 4319.557 kb on + strand, within CA264_18565 at 4319.557 kb on + strand, within CA264_18565 at 4319.575 kb on - strand, within CA264_18565 at 4319.594 kb on - strand, within CA264_18565 at 4319.600 kb on - strand, within CA264_18565 at 4319.610 kb on + strand, within CA264_18565 at 4319.614 kb on + strand, within CA264_18565 at 4319.614 kb on + strand, within CA264_18565 at 4319.620 kb on + strand, within CA264_18565 at 4319.620 kb on + strand, within CA264_18565 at 4319.634 kb on - strand, within CA264_18565 at 4319.636 kb on + strand, within CA264_18565 at 4319.639 kb on + strand, within CA264_18565 at 4319.639 kb on + strand, within CA264_18565 at 4319.640 kb on - strand, within CA264_18565 at 4319.648 kb on - strand, within CA264_18565 at 4319.650 kb on + strand, within CA264_18565 at 4319.650 kb on + strand, within CA264_18565 at 4319.650 kb on + strand, within CA264_18565 at 4319.651 kb on - strand, within CA264_18565 at 4319.653 kb on + strand, within CA264_18565 at 4319.707 kb on + strand, within CA264_18565 at 4319.746 kb on + strand, within CA264_18565 at 4319.748 kb on + strand, within CA264_18565 at 4319.767 kb on + strand, within CA264_18565 at 4319.781 kb on + strand, within CA264_18565 at 4319.782 kb on - strand, within CA264_18565 at 4319.785 kb on + strand, within CA264_18565 at 4319.785 kb on + strand, within CA264_18565 at 4319.786 kb on - strand, within CA264_18565 at 4319.786 kb on - strand, within CA264_18565 at 4319.786 kb on - strand, within CA264_18565 at 4319.788 kb on + strand, within CA264_18565 at 4319.807 kb on + strand, within CA264_18565 at 4319.860 kb on + strand, within CA264_18565 at 4319.861 kb on - strand, within CA264_18565 at 4319.865 kb on + strand, within CA264_18565 at 4319.865 kb on + strand, within CA264_18565 at 4319.878 kb on + strand, within CA264_18565 at 4319.902 kb on + strand, within CA264_18565 at 4319.906 kb on - strand, within CA264_18565 at 4319.908 kb on + strand, within CA264_18565 at 4319.908 kb on + strand, within CA264_18565 at 4319.908 kb on + strand, within CA264_18565 at 4319.926 kb on - strand, within CA264_18565 at 4319.930 kb on - strand, within CA264_18565 at 4319.938 kb on + strand, within CA264_18565 at 4319.945 kb on + strand, within CA264_18565 at 4319.982 kb on + strand, within CA264_18565 at 4319.983 kb on - strand, within CA264_18565 at 4319.998 kb on - strand, within CA264_18565 at 4320.001 kb on + strand, within CA264_18565 at 4320.016 kb on + strand, within CA264_18565 at 4320.030 kb on + strand, within CA264_18565 at 4320.031 kb on - strand, within CA264_18565 at 4320.131 kb on - strand, within CA264_18565 at 4320.164 kb on - strand, within CA264_18565 at 4320.164 kb on - strand, within CA264_18565 at 4320.202 kb on + strand, within CA264_18565 at 4320.203 kb on - strand, within CA264_18565 at 4320.322 kb on - strand at 4320.337 kb on + strand at 4320.338 kb on - strand at 4320.347 kb on + strand at 4320.368 kb on + strand at 4320.369 kb on - strand at 4320.371 kb on + strand at 4320.371 kb on + strand at 4320.372 kb on - strand at 4320.372 kb on - strand at 4320.385 kb on + strand at 4320.386 kb on - strand at 4320.390 kb on - strand at 4320.426 kb on - strand at 4320.432 kb on - strand at 4320.483 kb on + strand at 4320.504 kb on + strand at 4320.581 kb on + strand, within CA264_18570 at 4320.581 kb on + strand, within CA264_18570 at 4320.592 kb on - strand, within CA264_18570 at 4320.602 kb on + strand, within CA264_18570 at 4320.603 kb on - strand, within CA264_18570 at 4320.603 kb on - strand, within CA264_18570 at 4320.661 kb on + strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.662 kb on - strand, within CA264_18570 at 4320.665 kb on + strand, within CA264_18570 at 4320.666 kb on - strand, within CA264_18570 at 4320.735 kb on + strand, within CA264_18570 at 4320.755 kb on + strand, within CA264_18570 at 4320.755 kb on + strand, within CA264_18570 at 4320.756 kb on - strand, within CA264_18570 at 4320.756 kb on - strand, within CA264_18570 at 4320.756 kb on - strand, within CA264_18570 at 4320.760 kb on - strand, within CA264_18570 at 4320.766 kb on + strand at 4320.766 kb on + strand at 4320.767 kb on - strand at 4320.767 kb on - strand at 4320.795 kb on - strand at 4320.803 kb on - strand at 4320.807 kb on + strand at 4320.808 kb on - strand at 4320.834 kb on - strand at 4320.914 kb on + strand, within CA264_18575 at 4320.915 kb on - strand, within CA264_18575 at 4320.943 kb on + strand, within CA264_18575 at 4321.042 kb on + strand, within CA264_18575 at 4321.043 kb on - strand, within CA264_18575 at 4321.103 kb on + strand, within CA264_18575 at 4321.151 kb on - strand, within CA264_18575 at 4321.151 kb on - strand, within CA264_18575 at 4321.184 kb on + strand, within CA264_18575 at 4321.217 kb on + strand, within CA264_18575 at 4321.228 kb on + strand, within CA264_18575 at 4321.231 kb on + strand, within CA264_18575 at 4321.231 kb on + strand, within CA264_18575 at 4321.244 kb on + strand, within CA264_18575 at 4321.256 kb on + strand, within CA264_18575 at 4321.257 kb on - strand, within CA264_18575 at 4321.257 kb on - strand, within CA264_18575 at 4321.268 kb on + strand, within CA264_18575 at 4321.269 kb on - strand, within CA264_18575 at 4321.269 kb on - strand, within CA264_18575 at 4321.278 kb on - strand at 4321.311 kb on + strand at 4321.312 kb on - strand at 4321.312 kb on - strand at 4321.319 kb on + strand at 4321.321 kb on + strand at 4321.349 kb on - strand at 4321.361 kb on + strand at 4321.361 kb on + strand at 4321.361 kb on + strand at 4321.362 kb on - strand at 4321.369 kb on + strand at 4321.370 kb on - strand at 4321.371 kb on + strand at 4321.371 kb on + strand at 4321.372 kb on - strand at 4321.387 kb on + strand at 4321.427 kb on + strand at 4321.427 kb on + strand at 4321.462 kb on + strand at 4321.475 kb on + strand at 4321.475 kb on + strand at 4321.475 kb on + strand at 4321.481 kb on - strand, within CA264_18580 at 4321.495 kb on + strand, within CA264_18580 at 4321.500 kb on + strand, within CA264_18580 at 4321.500 kb on + strand, within CA264_18580 at 4321.501 kb on - strand, within CA264_18580 at 4321.501 kb on - strand, within CA264_18580 at 4321.501 kb on - strand, within CA264_18580 at 4321.501 kb on - strand, within CA264_18580 at 4321.501 kb on - strand, within CA264_18580 at 4321.506 kb on + strand, within CA264_18580 at 4321.507 kb on - strand, within CA264_18580 at 4321.507 kb on - strand, within CA264_18580 at 4321.520 kb on + strand, within CA264_18580 at 4321.528 kb on - strand, within CA264_18580 at 4321.531 kb on + strand, within CA264_18580 at 4321.531 kb on + strand, within CA264_18580 at 4321.532 kb on - strand, within CA264_18580 at 4321.534 kb on + strand, within CA264_18580 at 4321.534 kb on + strand, within CA264_18580 at 4321.556 kb on + strand, within CA264_18580 at 4321.560 kb on + strand, within CA264_18580 at 4321.560 kb on + strand, within CA264_18580 at 4321.560 kb on + strand, within CA264_18580 at 4321.560 kb on + strand, within CA264_18580 at 4321.561 kb on - strand, within CA264_18580 at 4321.594 kb on + strand, within CA264_18580 at 4321.597 kb on + strand, within CA264_18580 at 4321.597 kb on + strand, within CA264_18580 at 4321.597 kb on + strand, within CA264_18580 at 4321.597 kb on + strand, within CA264_18580 at 4321.598 kb on - strand, within CA264_18580 at 4321.599 kb on + strand, within CA264_18580 at 4321.600 kb on - strand, within CA264_18580 at 4321.600 kb on - strand, within CA264_18580 at 4321.600 kb on - strand, within CA264_18580 at 4321.600 kb on - strand, within CA264_18580 at 4321.609 kb on - strand, within CA264_18580 at 4321.618 kb on - strand, within CA264_18580 at 4321.639 kb on + strand, within CA264_18580 at 4321.639 kb on + strand, within CA264_18580 at 4321.641 kb on + strand, within CA264_18580 at 4321.641 kb on + strand, within CA264_18580 at 4321.642 kb on - strand, within CA264_18580 at 4321.642 kb on - strand, within CA264_18580 at 4321.645 kb on + strand, within CA264_18580 at 4321.657 kb on + strand, within CA264_18580 at 4321.666 kb on - strand, within CA264_18580 at 4321.678 kb on + strand, within CA264_18580 at 4321.678 kb on + strand, within CA264_18580 at 4321.685 kb on - strand, within CA264_18580 at 4321.687 kb on + strand, within CA264_18580 at 4321.687 kb on + strand, within CA264_18580 at 4321.688 kb on - strand, within CA264_18580 at 4321.688 kb on - strand, within CA264_18580 at 4321.694 kb on + strand, within CA264_18580 at 4321.696 kb on + strand, within CA264_18580 at 4321.709 kb on + strand, within CA264_18580 at 4321.709 kb on + strand, within CA264_18580 at 4321.710 kb on - strand, within CA264_18580 at 4321.712 kb on + strand, within CA264_18580 at 4321.713 kb on - strand, within CA264_18580 at 4321.739 kb on + strand, within CA264_18580 at 4321.739 kb on + strand, within CA264_18580 at 4321.739 kb on + strand, within CA264_18580 at 4321.740 kb on - strand, within CA264_18580 at 4321.740 kb on - strand, within CA264_18580 at 4321.740 kb on - strand, within CA264_18580 at 4321.740 kb on - strand, within CA264_18580 at 4321.772 kb on + strand, within CA264_18580 at 4321.772 kb on + strand, within CA264_18580 at 4321.772 kb on + strand, within CA264_18580 at 4321.773 kb on - strand, within CA264_18580 at 4321.773 kb on - strand, within CA264_18580
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,319,550 + CA264_18565 0.34 -0.1 4,319,551 - CA264_18565 0.34 +0.6 4,319,552 + CA264_18565 0.34 +0.1 4,319,553 - CA264_18565 0.34 +1.2 4,319,557 + CA264_18565 0.34 +0.5 4,319,557 + CA264_18565 0.34 +0.7 4,319,575 - CA264_18565 0.36 +1.4 4,319,594 - CA264_18565 0.37 +0.5 4,319,600 - CA264_18565 0.38 +1.0 4,319,610 + CA264_18565 0.39 +1.5 4,319,614 + CA264_18565 0.39 -0.3 4,319,614 + CA264_18565 0.39 -0.3 4,319,620 + CA264_18565 0.39 -0.0 4,319,620 + CA264_18565 0.39 -0.5 4,319,634 - CA264_18565 0.41 +1.5 4,319,636 + CA264_18565 0.41 -0.1 4,319,639 + CA264_18565 0.41 -0.9 4,319,639 + CA264_18565 0.41 +0.0 4,319,640 - CA264_18565 0.41 +0.2 4,319,648 - CA264_18565 0.42 +0.1 4,319,650 + CA264_18565 0.42 +1.2 4,319,650 + CA264_18565 0.42 -0.1 4,319,650 + CA264_18565 0.42 -0.4 4,319,651 - CA264_18565 0.42 +0.6 4,319,653 + CA264_18565 0.42 -0.2 4,319,707 + CA264_18565 0.47 -0.9 4,319,746 + CA264_18565 0.50 -0.5 4,319,748 + CA264_18565 0.50 -2.4 4,319,767 + CA264_18565 0.52 -0.4 4,319,781 + CA264_18565 0.53 +1.4 4,319,782 - CA264_18565 0.53 -0.1 4,319,785 + CA264_18565 0.53 -0.1 4,319,785 + CA264_18565 0.53 +0.5 4,319,786 - CA264_18565 0.53 +1.3 4,319,786 - CA264_18565 0.53 +1.4 4,319,786 - CA264_18565 0.53 -0.4 4,319,788 + CA264_18565 0.53 +0.8 4,319,807 + CA264_18565 0.55 +0.6 4,319,860 + CA264_18565 0.59 -0.9 4,319,861 - CA264_18565 0.59 -0.0 4,319,865 + CA264_18565 0.60 -0.9 4,319,865 + CA264_18565 0.60 +0.1 4,319,878 + CA264_18565 0.61 -0.7 4,319,902 + CA264_18565 0.63 -0.3 4,319,906 - CA264_18565 0.63 +0.1 4,319,908 + CA264_18565 0.63 +0.2 4,319,908 + CA264_18565 0.63 -0.4 4,319,908 + CA264_18565 0.63 -0.7 4,319,926 - CA264_18565 0.65 +0.6 4,319,930 - CA264_18565 0.65 +0.7 4,319,938 + CA264_18565 0.66 -0.2 4,319,945 + CA264_18565 0.66 +0.1 4,319,982 + CA264_18565 0.69 -0.5 4,319,983 - CA264_18565 0.70 +0.4 4,319,998 - CA264_18565 0.71 +0.5 4,320,001 + CA264_18565 0.71 -0.3 4,320,016 + CA264_18565 0.72 -0.8 4,320,030 + CA264_18565 0.73 +0.4 4,320,031 - CA264_18565 0.74 +0.1 4,320,131 - CA264_18565 0.82 +0.8 4,320,164 - CA264_18565 0.85 +0.3 4,320,164 - CA264_18565 0.85 +0.5 4,320,202 + CA264_18565 0.88 +0.0 4,320,203 - CA264_18565 0.88 +1.2 4,320,322 - +1.2 4,320,337 + -0.1 4,320,338 - -0.8 4,320,347 + +0.0 4,320,368 + -1.1 4,320,369 - +0.8 4,320,371 + -0.7 4,320,371 + +0.9 4,320,372 - +0.9 4,320,372 - +1.1 4,320,385 + -0.5 4,320,386 - +1.4 4,320,390 - +0.6 4,320,426 - +1.1 4,320,432 - +0.2 4,320,483 + -1.1 4,320,504 + +0.2 4,320,581 + CA264_18570 0.30 -0.6 4,320,581 + CA264_18570 0.30 +0.2 4,320,592 - CA264_18570 0.34 -0.4 4,320,602 + CA264_18570 0.37 -0.8 4,320,603 - CA264_18570 0.38 +0.1 4,320,603 - CA264_18570 0.38 +0.0 4,320,661 + CA264_18570 0.57 -0.4 4,320,662 - CA264_18570 0.57 -0.4 4,320,662 - CA264_18570 0.57 -0.1 4,320,662 - CA264_18570 0.57 -0.5 4,320,662 - CA264_18570 0.57 -0.7 4,320,662 - CA264_18570 0.57 -0.1 4,320,662 - CA264_18570 0.57 -0.8 4,320,662 - CA264_18570 0.57 +0.3 4,320,662 - CA264_18570 0.57 +0.3 4,320,662 - CA264_18570 0.57 -1.1 4,320,665 + CA264_18570 0.58 +0.2 4,320,666 - CA264_18570 0.58 +0.9 4,320,735 + CA264_18570 0.81 -0.3 4,320,755 + CA264_18570 0.87 -0.5 4,320,755 + CA264_18570 0.87 -0.4 4,320,756 - CA264_18570 0.88 -1.9 4,320,756 - CA264_18570 0.88 +0.1 4,320,756 - CA264_18570 0.88 +0.6 4,320,760 - CA264_18570 0.89 +1.4 4,320,766 + -0.4 4,320,766 + +0.4 4,320,767 - -1.1 4,320,767 - +0.2 4,320,795 - +0.7 4,320,803 - +0.0 4,320,807 + +0.3 4,320,808 - +0.1 4,320,834 - +0.3 4,320,914 + CA264_18575 0.23 -0.6 4,320,915 - CA264_18575 0.23 -0.3 4,320,943 + CA264_18575 0.29 -0.2 4,321,042 + CA264_18575 0.47 -0.5 4,321,043 - CA264_18575 0.47 -0.6 4,321,103 + CA264_18575 0.59 +0.0 4,321,151 - CA264_18575 0.68 -1.0 4,321,151 - CA264_18575 0.68 -0.2 4,321,184 + CA264_18575 0.74 +1.1 4,321,217 + CA264_18575 0.80 +0.4 4,321,228 + CA264_18575 0.82 -0.0 4,321,231 + CA264_18575 0.83 +0.9 4,321,231 + CA264_18575 0.83 -1.4 4,321,244 + CA264_18575 0.85 -0.9 4,321,256 + CA264_18575 0.87 -2.8 4,321,257 - CA264_18575 0.87 -0.3 4,321,257 - CA264_18575 0.87 -0.2 4,321,268 + CA264_18575 0.90 +1.7 4,321,269 - CA264_18575 0.90 -0.2 4,321,269 - CA264_18575 0.90 +0.7 4,321,278 - -0.6 4,321,311 + -1.6 4,321,312 - -0.1 4,321,312 - +0.4 4,321,319 + +0.0 4,321,321 + -0.4 4,321,349 - -0.9 4,321,361 + -1.2 4,321,361 + +0.9 4,321,361 + +0.5 4,321,362 - +0.1 4,321,369 + -0.3 4,321,370 - -0.6 4,321,371 + +0.5 4,321,371 + -0.7 4,321,372 - -0.1 4,321,387 + +0.5 4,321,427 + +0.1 4,321,427 + +1.5 4,321,462 + +0.6 4,321,475 + +0.7 4,321,475 + +0.1 4,321,475 + -1.2 4,321,481 - CA264_18580 0.10 -0.0 4,321,495 + CA264_18580 0.12 -0.2 4,321,500 + CA264_18580 0.12 -0.3 4,321,500 + CA264_18580 0.12 -0.3 4,321,501 - CA264_18580 0.13 -0.2 4,321,501 - CA264_18580 0.13 +0.1 4,321,501 - CA264_18580 0.13 -0.3 4,321,501 - CA264_18580 0.13 -2.3 4,321,501 - CA264_18580 0.13 -0.6 4,321,506 + CA264_18580 0.13 -0.5 4,321,507 - CA264_18580 0.13 -0.9 4,321,507 - CA264_18580 0.13 +1.4 4,321,520 + CA264_18580 0.15 -0.5 4,321,528 - CA264_18580 0.16 +0.9 4,321,531 + CA264_18580 0.16 +0.3 4,321,531 + CA264_18580 0.16 -0.1 4,321,532 - CA264_18580 0.16 +0.9 4,321,534 + CA264_18580 0.16 -0.3 4,321,534 + CA264_18580 0.16 +0.8 4,321,556 + CA264_18580 0.19 -0.4 4,321,560 + CA264_18580 0.19 +0.7 4,321,560 + CA264_18580 0.19 -0.9 4,321,560 + CA264_18580 0.19 +0.5 4,321,560 + CA264_18580 0.19 -0.3 4,321,561 - CA264_18580 0.19 -0.5 4,321,594 + CA264_18580 0.23 -0.3 4,321,597 + CA264_18580 0.23 +1.3 4,321,597 + CA264_18580 0.23 -0.7 4,321,597 + CA264_18580 0.23 +0.2 4,321,597 + CA264_18580 0.23 +0.3 4,321,598 - CA264_18580 0.23 +0.3 4,321,599 + CA264_18580 0.23 +0.1 4,321,600 - CA264_18580 0.24 +0.4 4,321,600 - CA264_18580 0.24 +0.1 4,321,600 - CA264_18580 0.24 +0.2 4,321,600 - CA264_18580 0.24 -0.8 4,321,609 - CA264_18580 0.25 -0.7 4,321,618 - CA264_18580 0.26 -0.9 4,321,639 + CA264_18580 0.28 -0.5 4,321,639 + CA264_18580 0.28 -0.5 4,321,641 + CA264_18580 0.28 -0.2 4,321,641 + CA264_18580 0.28 -0.2 4,321,642 - CA264_18580 0.28 +1.6 4,321,642 - CA264_18580 0.28 -0.6 4,321,645 + CA264_18580 0.29 -1.6 4,321,657 + CA264_18580 0.30 +1.3 4,321,666 - CA264_18580 0.31 -0.1 4,321,678 + CA264_18580 0.32 -0.1 4,321,678 + CA264_18580 0.32 -0.2 4,321,685 - CA264_18580 0.33 -0.3 4,321,687 + CA264_18580 0.33 +2.1 4,321,687 + CA264_18580 0.33 -0.2 4,321,688 - CA264_18580 0.33 +2.7 4,321,688 - CA264_18580 0.33 +2.9 4,321,694 + CA264_18580 0.34 -0.4 4,321,696 + CA264_18580 0.34 +0.2 4,321,709 + CA264_18580 0.36 -1.2 4,321,709 + CA264_18580 0.36 -0.3 4,321,710 - CA264_18580 0.36 +0.4 4,321,712 + CA264_18580 0.36 -1.5 4,321,713 - CA264_18580 0.36 -0.8 4,321,739 + CA264_18580 0.39 +0.6 4,321,739 + CA264_18580 0.39 -2.4 4,321,739 + CA264_18580 0.39 -0.2 4,321,740 - CA264_18580 0.39 +0.6 4,321,740 - CA264_18580 0.39 +0.1 4,321,740 - CA264_18580 0.39 -0.3 4,321,740 - CA264_18580 0.39 -0.5 4,321,772 + CA264_18580 0.43 -0.2 4,321,772 + CA264_18580 0.43 +1.8 4,321,772 + CA264_18580 0.43 +0.8 4,321,773 - CA264_18580 0.43 +0.2 4,321,773 - CA264_18580 0.43 +0.2
Or see this region's nucleotide sequence