Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18545 and CA264_18550 are separated by 321 nucleotides CA264_18550 and CA264_18555 are separated by 81 nucleotides CA264_18555 and CA264_18560 are separated by 202 nucleotides
CA264_18545: CA264_18545 - DNA mismatch repair protein MutS, at 4,314,652 to 4,317,285
_18545
CA264_18550: CA264_18550 - tRNA-Gly, at 4,317,607 to 4,317,679
_18550
CA264_18555: CA264_18555 - tRNA-Leu, at 4,317,761 to 4,317,844
_18555
CA264_18560: CA264_18560 - hypothetical protein, at 4,318,047 to 4,319,141
_18560
Position (kb) 4317
4318 Strain fitness (log2 ratio) -1
0
1
2 at 4316.770 kb on + strand, within CA264_18545 at 4316.827 kb on + strand, within CA264_18545 at 4316.828 kb on - strand, within CA264_18545 at 4316.828 kb on - strand, within CA264_18545 at 4316.857 kb on + strand, within CA264_18545 at 4316.858 kb on - strand, within CA264_18545 at 4316.905 kb on + strand, within CA264_18545 at 4316.905 kb on + strand, within CA264_18545 at 4316.905 kb on + strand, within CA264_18545 at 4316.906 kb on - strand, within CA264_18545 at 4316.906 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4316.991 kb on - strand, within CA264_18545 at 4317.415 kb on - strand at 4317.415 kb on - strand at 4317.872 kb on + strand at 4317.984 kb on - strand at 4318.117 kb on + strand at 4318.118 kb on - strand at 4318.123 kb on + strand at 4318.124 kb on - strand at 4318.126 kb on - strand at 4318.130 kb on - strand at 4318.137 kb on + strand at 4318.138 kb on - strand at 4318.141 kb on - strand at 4318.168 kb on + strand, within CA264_18560 at 4318.217 kb on + strand, within CA264_18560 at 4318.217 kb on + strand, within CA264_18560 at 4318.218 kb on - strand, within CA264_18560 at 4318.218 kb on - strand, within CA264_18560 at 4318.318 kb on + strand, within CA264_18560 at 4318.319 kb on - strand, within CA264_18560 at 4318.332 kb on + strand, within CA264_18560 at 4318.332 kb on + strand, within CA264_18560 at 4318.335 kb on + strand, within CA264_18560 at 4318.336 kb on - strand at 4318.378 kb on + strand, within CA264_18560 at 4318.379 kb on - strand, within CA264_18560 at 4318.393 kb on + strand, within CA264_18560 at 4318.431 kb on - strand, within CA264_18560 at 4318.457 kb on + strand, within CA264_18560 at 4318.474 kb on + strand, within CA264_18560 at 4318.500 kb on - strand, within CA264_18560 at 4318.500 kb on - strand, within CA264_18560 at 4318.542 kb on - strand, within CA264_18560 at 4318.563 kb on - strand, within CA264_18560 at 4318.576 kb on + strand, within CA264_18560 at 4318.642 kb on + strand, within CA264_18560 at 4318.649 kb on - strand, within CA264_18560 at 4318.748 kb on + strand, within CA264_18560 at 4318.749 kb on - strand, within CA264_18560 at 4318.769 kb on + strand, within CA264_18560 at 4318.769 kb on + strand, within CA264_18560 at 4318.771 kb on + strand, within CA264_18560 at 4318.771 kb on + strand, within CA264_18560 at 4318.827 kb on - strand, within CA264_18560
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,316,770 + CA264_18545 0.80 -1.1 4,316,827 + CA264_18545 0.83 -0.6 4,316,828 - CA264_18545 0.83 -0.2 4,316,828 - CA264_18545 0.83 +0.8 4,316,857 + CA264_18545 0.84 -0.5 4,316,858 - CA264_18545 0.84 -0.5 4,316,905 + CA264_18545 0.86 -0.0 4,316,905 + CA264_18545 0.86 +0.7 4,316,905 + CA264_18545 0.86 -0.4 4,316,906 - CA264_18545 0.86 +1.4 4,316,906 - CA264_18545 0.86 +1.1 4,316,991 - CA264_18545 0.89 +0.8 4,316,991 - CA264_18545 0.89 +0.2 4,316,991 - CA264_18545 0.89 -0.6 4,316,991 - CA264_18545 0.89 +0.2 4,317,415 - -0.3 4,317,415 - -0.4 4,317,872 + -0.5 4,317,984 - +0.5 4,318,117 + +0.1 4,318,118 - +0.3 4,318,123 + -0.8 4,318,124 - +2.0 4,318,126 - +0.2 4,318,130 - +0.9 4,318,137 + +1.6 4,318,138 - -0.2 4,318,141 - -0.6 4,318,168 + CA264_18560 0.11 +0.7 4,318,217 + CA264_18560 0.16 +0.5 4,318,217 + CA264_18560 0.16 +0.3 4,318,218 - CA264_18560 0.16 +0.7 4,318,218 - CA264_18560 0.16 -0.0 4,318,318 + CA264_18560 0.25 +0.4 4,318,319 - CA264_18560 0.25 +0.3 4,318,332 + CA264_18560 0.26 +0.0 4,318,332 + CA264_18560 0.26 +0.2 4,318,335 + CA264_18560 0.26 -0.6 4,318,336 - +1.6 4,318,378 + CA264_18560 0.30 +2.2 4,318,379 - CA264_18560 0.30 -0.2 4,318,393 + CA264_18560 0.32 +1.5 4,318,431 - CA264_18560 0.35 +0.3 4,318,457 + CA264_18560 0.37 -0.3 4,318,474 + CA264_18560 0.39 -0.7 4,318,500 - CA264_18560 0.41 +1.0 4,318,500 - CA264_18560 0.41 +0.9 4,318,542 - CA264_18560 0.45 -0.6 4,318,563 - CA264_18560 0.47 +0.5 4,318,576 + CA264_18560 0.48 -0.0 4,318,642 + CA264_18560 0.54 +0.2 4,318,649 - CA264_18560 0.55 +0.2 4,318,748 + CA264_18560 0.64 +0.2 4,318,749 - CA264_18560 0.64 +0.5 4,318,769 + CA264_18560 0.66 +0.4 4,318,769 + CA264_18560 0.66 +0.0 4,318,771 + CA264_18560 0.66 +0.1 4,318,771 + CA264_18560 0.66 -1.4 4,318,827 - CA264_18560 0.71 +0.8
Or see this region's nucleotide sequence