Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18070 and CA264_18075 are separated by 688 nucleotides CA264_18075 and CA264_18080 are separated by 146 nucleotides CA264_18080 and CA264_18085 are separated by 149 nucleotides
CA264_18070: CA264_18070 - RNA polymerase sigma-54 factor, at 4,201,984 to 4,203,426
_18070
CA264_18075: CA264_18075 - 3-dehydro-L-gulonate 2-dehydrogenase, at 4,204,115 to 4,205,119
_18075
CA264_18080: CA264_18080 - hypothetical protein, at 4,205,266 to 4,205,856
_18080
CA264_18085: CA264_18085 - 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase, at 4,206,006 to 4,206,788
_18085
Position (kb)
4204
4205
4206 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4203.425 kb on - strand at 4203.456 kb on - strand at 4203.456 kb on - strand at 4203.547 kb on - strand at 4203.547 kb on - strand at 4203.553 kb on - strand at 4203.559 kb on - strand at 4203.564 kb on + strand at 4203.564 kb on + strand at 4203.602 kb on + strand at 4203.602 kb on + strand at 4203.602 kb on + strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.603 kb on - strand at 4203.646 kb on + strand at 4203.655 kb on + strand at 4203.655 kb on + strand at 4203.655 kb on + strand at 4203.656 kb on - strand at 4203.679 kb on - strand at 4203.727 kb on + strand at 4203.728 kb on - strand at 4203.749 kb on + strand at 4203.749 kb on + strand at 4203.750 kb on - strand at 4203.751 kb on + strand at 4203.809 kb on + strand at 4203.858 kb on + strand at 4203.859 kb on - strand at 4203.989 kb on + strand at 4203.990 kb on - strand at 4204.033 kb on + strand at 4204.034 kb on - strand at 4204.078 kb on + strand at 4204.103 kb on - strand at 4204.103 kb on - strand at 4204.155 kb on + strand at 4204.156 kb on - strand at 4204.195 kb on + strand at 4204.312 kb on + strand, within CA264_18075 at 4204.312 kb on + strand, within CA264_18075 at 4204.312 kb on + strand, within CA264_18075 at 4204.313 kb on - strand, within CA264_18075 at 4204.314 kb on + strand, within CA264_18075 at 4204.341 kb on + strand, within CA264_18075 at 4204.357 kb on - strand, within CA264_18075 at 4204.394 kb on + strand, within CA264_18075 at 4204.394 kb on + strand, within CA264_18075 at 4204.395 kb on - strand, within CA264_18075 at 4204.499 kb on + strand, within CA264_18075 at 4204.499 kb on + strand, within CA264_18075 at 4204.499 kb on + strand, within CA264_18075 at 4204.500 kb on - strand, within CA264_18075 at 4204.528 kb on + strand, within CA264_18075 at 4204.529 kb on - strand, within CA264_18075 at 4204.534 kb on + strand, within CA264_18075 at 4204.535 kb on - strand, within CA264_18075 at 4204.614 kb on + strand, within CA264_18075 at 4204.614 kb on + strand, within CA264_18075 at 4204.615 kb on - strand, within CA264_18075 at 4204.692 kb on - strand, within CA264_18075 at 4204.821 kb on + strand, within CA264_18075 at 4204.829 kb on - strand, within CA264_18075 at 4204.944 kb on + strand, within CA264_18075 at 4204.945 kb on - strand, within CA264_18075 at 4204.956 kb on + strand, within CA264_18075 at 4204.960 kb on + strand, within CA264_18075 at 4204.961 kb on - strand, within CA264_18075 at 4204.976 kb on + strand, within CA264_18075 at 4204.976 kb on + strand, within CA264_18075 at 4204.979 kb on - strand, within CA264_18075 at 4205.139 kb on + strand at 4205.159 kb on + strand at 4205.165 kb on + strand at 4205.166 kb on - strand at 4205.166 kb on - strand at 4205.184 kb on - strand at 4205.202 kb on - strand at 4205.214 kb on - strand at 4205.216 kb on - strand at 4205.294 kb on - strand at 4205.307 kb on + strand at 4205.307 kb on + strand at 4205.314 kb on + strand at 4205.317 kb on + strand at 4205.318 kb on - strand at 4205.318 kb on - strand at 4205.318 kb on - strand at 4205.397 kb on + strand, within CA264_18080 at 4205.397 kb on + strand, within CA264_18080 at 4205.397 kb on + strand, within CA264_18080 at 4205.398 kb on - strand, within CA264_18080 at 4205.421 kb on - strand, within CA264_18080 at 4205.421 kb on - strand, within CA264_18080 at 4205.627 kb on + strand, within CA264_18080 at 4205.627 kb on + strand, within CA264_18080 at 4205.628 kb on - strand, within CA264_18080 at 4205.628 kb on - strand, within CA264_18080 at 4205.794 kb on + strand, within CA264_18080 at 4205.851 kb on + strand at 4205.855 kb on - strand at 4205.875 kb on - strand at 4205.982 kb on + strand at 4206.002 kb on - strand at 4206.002 kb on - strand at 4206.012 kb on + strand at 4206.025 kb on + strand at 4206.105 kb on + strand, within CA264_18085
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,203,425 - +0.6 4,203,456 - +0.3 4,203,456 - -0.4 4,203,547 - +0.8 4,203,547 - -1.5 4,203,553 - -0.6 4,203,559 - +1.8 4,203,564 + +2.0 4,203,564 + +0.4 4,203,602 + +0.9 4,203,602 + -0.0 4,203,602 + +0.5 4,203,603 - -0.2 4,203,603 - -1.3 4,203,603 - -0.5 4,203,603 - +1.0 4,203,603 - +0.1 4,203,646 + +0.3 4,203,655 + +0.0 4,203,655 + -0.4 4,203,655 + -0.1 4,203,656 - +0.6 4,203,679 - +0.3 4,203,727 + +0.2 4,203,728 - -0.9 4,203,749 + +1.4 4,203,749 + -0.2 4,203,750 - +0.9 4,203,751 + -1.4 4,203,809 + -0.6 4,203,858 + -0.1 4,203,859 - +0.7 4,203,989 + +0.2 4,203,990 - +1.1 4,204,033 + -1.6 4,204,034 - +0.4 4,204,078 + +0.7 4,204,103 - +0.7 4,204,103 - -0.5 4,204,155 + -0.1 4,204,156 - +1.2 4,204,195 + -1.5 4,204,312 + CA264_18075 0.20 -0.5 4,204,312 + CA264_18075 0.20 -0.3 4,204,312 + CA264_18075 0.20 -0.0 4,204,313 - CA264_18075 0.20 -2.0 4,204,314 + CA264_18075 0.20 -0.4 4,204,341 + CA264_18075 0.22 -0.5 4,204,357 - CA264_18075 0.24 +0.6 4,204,394 + CA264_18075 0.28 -0.1 4,204,394 + CA264_18075 0.28 +1.1 4,204,395 - CA264_18075 0.28 +0.7 4,204,499 + CA264_18075 0.38 -0.4 4,204,499 + CA264_18075 0.38 -1.3 4,204,499 + CA264_18075 0.38 +0.5 4,204,500 - CA264_18075 0.38 +0.5 4,204,528 + CA264_18075 0.41 +0.7 4,204,529 - CA264_18075 0.41 +0.4 4,204,534 + CA264_18075 0.42 -1.1 4,204,535 - CA264_18075 0.42 +0.2 4,204,614 + CA264_18075 0.50 -1.7 4,204,614 + CA264_18075 0.50 +0.2 4,204,615 - CA264_18075 0.50 +0.5 4,204,692 - CA264_18075 0.57 +0.1 4,204,821 + CA264_18075 0.70 +0.4 4,204,829 - CA264_18075 0.71 +0.5 4,204,944 + CA264_18075 0.82 -0.8 4,204,945 - CA264_18075 0.83 +0.9 4,204,956 + CA264_18075 0.84 +0.9 4,204,960 + CA264_18075 0.84 +0.1 4,204,961 - CA264_18075 0.84 +2.7 4,204,976 + CA264_18075 0.86 -1.0 4,204,976 + CA264_18075 0.86 -2.2 4,204,979 - CA264_18075 0.86 +0.1 4,205,139 + +0.0 4,205,159 + -0.8 4,205,165 + -0.6 4,205,166 - -0.8 4,205,166 - +0.4 4,205,184 - +0.1 4,205,202 - +0.6 4,205,214 - +0.8 4,205,216 - -0.2 4,205,294 - +0.8 4,205,307 + -0.9 4,205,307 + -0.5 4,205,314 + -1.4 4,205,317 + -0.7 4,205,318 - -1.6 4,205,318 - -0.1 4,205,318 - +0.5 4,205,397 + CA264_18080 0.22 +3.0 4,205,397 + CA264_18080 0.22 -1.5 4,205,397 + CA264_18080 0.22 -0.2 4,205,398 - CA264_18080 0.22 +0.4 4,205,421 - CA264_18080 0.26 +0.4 4,205,421 - CA264_18080 0.26 +0.4 4,205,627 + CA264_18080 0.61 -1.9 4,205,627 + CA264_18080 0.61 -0.1 4,205,628 - CA264_18080 0.61 -0.0 4,205,628 - CA264_18080 0.61 +1.4 4,205,794 + CA264_18080 0.89 +0.1 4,205,851 + +0.1 4,205,855 - +0.5 4,205,875 - +0.1 4,205,982 + -0.5 4,206,002 - -1.3 4,206,002 - +0.1 4,206,012 + -0.7 4,206,025 + +0.9 4,206,105 + CA264_18085 0.13 -1.0
Or see this region's nucleotide sequence