Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17850 and CA264_17855 are separated by 126 nucleotides CA264_17855 and CA264_17860 are separated by 441 nucleotides
CA264_17850: CA264_17850 - sodium:proton antiporter, at 4,149,917 to 4,151,887
_17850
CA264_17855: CA264_17855 - EamA family transporter, at 4,152,014 to 4,152,763
_17855
CA264_17860: CA264_17860 - tRNA dihydrouridine synthase DusB, at 4,153,205 to 4,154,194
_17860
Position (kb)
4152
4153 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4151.033 kb on - strand, within CA264_17850 at 4151.034 kb on + strand, within CA264_17850 at 4151.035 kb on - strand, within CA264_17850 at 4151.109 kb on + strand, within CA264_17850 at 4151.110 kb on - strand, within CA264_17850 at 4151.188 kb on - strand, within CA264_17850 at 4151.225 kb on - strand, within CA264_17850 at 4151.381 kb on + strand, within CA264_17850 at 4151.382 kb on - strand, within CA264_17850 at 4151.382 kb on - strand, within CA264_17850 at 4151.382 kb on - strand, within CA264_17850 at 4151.385 kb on + strand, within CA264_17850 at 4151.386 kb on - strand, within CA264_17850 at 4151.386 kb on - strand, within CA264_17850 at 4151.386 kb on - strand, within CA264_17850 at 4151.425 kb on + strand, within CA264_17850 at 4151.426 kb on - strand, within CA264_17850 at 4151.439 kb on + strand, within CA264_17850 at 4151.439 kb on + strand, within CA264_17850 at 4151.534 kb on + strand, within CA264_17850 at 4151.535 kb on - strand, within CA264_17850 at 4151.548 kb on + strand, within CA264_17850 at 4151.549 kb on - strand, within CA264_17850 at 4151.631 kb on - strand, within CA264_17850 at 4151.801 kb on + strand at 4151.802 kb on - strand at 4151.896 kb on + strand at 4151.896 kb on + strand at 4151.896 kb on + strand at 4151.896 kb on + strand at 4151.897 kb on - strand at 4151.897 kb on - strand at 4151.897 kb on - strand at 4151.899 kb on - strand at 4151.899 kb on - strand at 4151.899 kb on - strand at 4151.899 kb on - strand at 4151.901 kb on - strand at 4151.910 kb on + strand at 4151.911 kb on - strand at 4151.911 kb on - strand at 4151.916 kb on + strand at 4151.941 kb on + strand at 4151.941 kb on + strand at 4151.941 kb on + strand at 4151.944 kb on - strand at 4152.069 kb on + strand at 4152.113 kb on - strand, within CA264_17855 at 4152.131 kb on - strand, within CA264_17855 at 4152.131 kb on - strand, within CA264_17855 at 4152.135 kb on + strand, within CA264_17855 at 4152.135 kb on + strand, within CA264_17855 at 4152.135 kb on + strand, within CA264_17855 at 4152.135 kb on + strand, within CA264_17855 at 4152.136 kb on - strand, within CA264_17855 at 4152.136 kb on - strand, within CA264_17855 at 4152.136 kb on - strand, within CA264_17855 at 4152.234 kb on + strand, within CA264_17855 at 4152.234 kb on + strand, within CA264_17855 at 4152.234 kb on + strand, within CA264_17855 at 4152.235 kb on - strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.269 kb on + strand, within CA264_17855 at 4152.270 kb on - strand, within CA264_17855 at 4152.270 kb on - strand, within CA264_17855 at 4152.276 kb on + strand, within CA264_17855 at 4152.276 kb on + strand, within CA264_17855 at 4152.321 kb on - strand, within CA264_17855 at 4152.379 kb on + strand, within CA264_17855 at 4152.379 kb on + strand, within CA264_17855 at 4152.379 kb on + strand, within CA264_17855 at 4152.420 kb on - strand, within CA264_17855 at 4152.426 kb on + strand, within CA264_17855 at 4152.426 kb on + strand, within CA264_17855 at 4152.435 kb on + strand, within CA264_17855 at 4152.435 kb on + strand, within CA264_17855 at 4152.436 kb on - strand, within CA264_17855 at 4152.436 kb on - strand, within CA264_17855 at 4152.438 kb on + strand, within CA264_17855 at 4152.439 kb on - strand, within CA264_17855 at 4152.439 kb on - strand, within CA264_17855 at 4152.439 kb on - strand, within CA264_17855 at 4152.479 kb on - strand, within CA264_17855 at 4152.592 kb on + strand, within CA264_17855 at 4152.593 kb on - strand, within CA264_17855 at 4152.593 kb on - strand, within CA264_17855 at 4152.593 kb on - strand, within CA264_17855 at 4152.793 kb on - strand at 4152.904 kb on + strand at 4152.905 kb on - strand at 4152.925 kb on - strand at 4152.949 kb on - strand at 4152.949 kb on - strand at 4152.957 kb on - strand at 4153.078 kb on - strand at 4153.335 kb on + strand, within CA264_17860 at 4153.409 kb on + strand, within CA264_17860 at 4153.445 kb on + strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.465 kb on - strand, within CA264_17860 at 4153.484 kb on + strand, within CA264_17860 at 4153.537 kb on - strand, within CA264_17860 at 4153.574 kb on + strand, within CA264_17860 at 4153.659 kb on + strand, within CA264_17860 at 4153.660 kb on - strand, within CA264_17860 at 4153.686 kb on - strand, within CA264_17860 at 4153.741 kb on - strand, within CA264_17860
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,151,033 - CA264_17850 0.57 -0.1 4,151,034 + CA264_17850 0.57 -1.4 4,151,035 - CA264_17850 0.57 +1.1 4,151,109 + CA264_17850 0.60 -1.0 4,151,110 - CA264_17850 0.61 +0.1 4,151,188 - CA264_17850 0.64 -0.7 4,151,225 - CA264_17850 0.66 -0.5 4,151,381 + CA264_17850 0.74 -2.0 4,151,382 - CA264_17850 0.74 +0.9 4,151,382 - CA264_17850 0.74 +1.0 4,151,382 - CA264_17850 0.74 -0.8 4,151,385 + CA264_17850 0.74 -0.0 4,151,386 - CA264_17850 0.75 +0.5 4,151,386 - CA264_17850 0.75 +0.3 4,151,386 - CA264_17850 0.75 -0.0 4,151,425 + CA264_17850 0.77 +0.4 4,151,426 - CA264_17850 0.77 -0.4 4,151,439 + CA264_17850 0.77 -0.3 4,151,439 + CA264_17850 0.77 +0.1 4,151,534 + CA264_17850 0.82 -0.9 4,151,535 - CA264_17850 0.82 -0.9 4,151,548 + CA264_17850 0.83 +0.2 4,151,549 - CA264_17850 0.83 +1.2 4,151,631 - CA264_17850 0.87 -0.1 4,151,801 + +0.4 4,151,802 - -1.1 4,151,896 + -1.3 4,151,896 + -0.9 4,151,896 + +0.1 4,151,896 + -0.7 4,151,897 - -0.3 4,151,897 - -0.2 4,151,897 - +0.3 4,151,899 - +0.9 4,151,899 - -1.3 4,151,899 - -0.5 4,151,899 - +0.2 4,151,901 - -1.0 4,151,910 + +2.0 4,151,911 - +1.6 4,151,911 - -0.8 4,151,916 + -0.2 4,151,941 + +0.2 4,151,941 + +0.5 4,151,941 + -0.6 4,151,944 - +0.3 4,152,069 + -1.9 4,152,113 - CA264_17855 0.13 -0.6 4,152,131 - CA264_17855 0.16 +1.1 4,152,131 - CA264_17855 0.16 -0.3 4,152,135 + CA264_17855 0.16 +0.1 4,152,135 + CA264_17855 0.16 +0.6 4,152,135 + CA264_17855 0.16 -1.4 4,152,135 + CA264_17855 0.16 +0.5 4,152,136 - CA264_17855 0.16 +0.2 4,152,136 - CA264_17855 0.16 -0.9 4,152,136 - CA264_17855 0.16 +1.1 4,152,234 + CA264_17855 0.29 -0.2 4,152,234 + CA264_17855 0.29 -0.5 4,152,234 + CA264_17855 0.29 -0.3 4,152,235 - CA264_17855 0.29 +0.0 4,152,269 + CA264_17855 0.34 +0.1 4,152,269 + CA264_17855 0.34 -0.9 4,152,269 + CA264_17855 0.34 -1.0 4,152,269 + CA264_17855 0.34 -1.1 4,152,270 - CA264_17855 0.34 -0.6 4,152,270 - CA264_17855 0.34 -0.1 4,152,276 + CA264_17855 0.35 -0.9 4,152,276 + CA264_17855 0.35 -0.3 4,152,321 - CA264_17855 0.41 -0.2 4,152,379 + CA264_17855 0.49 -0.5 4,152,379 + CA264_17855 0.49 -0.4 4,152,379 + CA264_17855 0.49 +0.5 4,152,420 - CA264_17855 0.54 -1.1 4,152,426 + CA264_17855 0.55 -1.9 4,152,426 + CA264_17855 0.55 +0.6 4,152,435 + CA264_17855 0.56 -0.5 4,152,435 + CA264_17855 0.56 -1.8 4,152,436 - CA264_17855 0.56 -0.5 4,152,436 - CA264_17855 0.56 +0.9 4,152,438 + CA264_17855 0.57 -0.8 4,152,439 - CA264_17855 0.57 +0.0 4,152,439 - CA264_17855 0.57 +0.2 4,152,439 - CA264_17855 0.57 -0.1 4,152,479 - CA264_17855 0.62 -0.4 4,152,592 + CA264_17855 0.77 -0.6 4,152,593 - CA264_17855 0.77 +0.1 4,152,593 - CA264_17855 0.77 +0.7 4,152,593 - CA264_17855 0.77 -0.0 4,152,793 - -0.2 4,152,904 + +0.1 4,152,905 - +0.6 4,152,925 - -0.2 4,152,949 - +0.9 4,152,949 - +1.4 4,152,957 - +0.5 4,153,078 - -1.0 4,153,335 + CA264_17860 0.13 +0.2 4,153,409 + CA264_17860 0.21 -1.1 4,153,445 + CA264_17860 0.24 -0.3 4,153,465 - CA264_17860 0.26 -0.5 4,153,465 - CA264_17860 0.26 -0.3 4,153,465 - CA264_17860 0.26 -1.2 4,153,484 + CA264_17860 0.28 +2.7 4,153,537 - CA264_17860 0.34 -0.2 4,153,574 + CA264_17860 0.37 +0.6 4,153,659 + CA264_17860 0.46 +0.7 4,153,660 - CA264_17860 0.46 +3.4 4,153,686 - CA264_17860 0.49 +0.5 4,153,741 - CA264_17860 0.54 +0.9
Or see this region's nucleotide sequence