Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17795 and CA264_17800 are separated by 185 nucleotides CA264_17800 and CA264_17805 are separated by 137 nucleotides CA264_17805 and CA264_17810 are separated by 210 nucleotides CA264_17810 and CA264_17815 are separated by 334 nucleotides
CA264_17795: CA264_17795 - dephospho-CoA kinase, at 4,138,066 to 4,138,662
_17795
CA264_17800: CA264_17800 - tRNA-Val, at 4,138,848 to 4,138,922
_17800
CA264_17805: CA264_17805 - tRNA-Val, at 4,139,060 to 4,139,137
_17805
CA264_17810: CA264_17810 - hypothetical protein, at 4,139,348 to 4,141,834
_17810
CA264_17815: CA264_17815 - hypothetical protein, at 4,142,169 to 4,143,347
_17815
Position (kb)
4139
4140
4141
4142 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.732 kb on + strand at 4138.741 kb on - strand at 4138.760 kb on + strand at 4138.760 kb on + strand at 4138.762 kb on + strand at 4138.762 kb on + strand at 4138.763 kb on - strand at 4138.763 kb on - strand at 4138.886 kb on + strand, within CA264_17800 at 4138.887 kb on - strand, within CA264_17800 at 4138.915 kb on - strand at 4138.915 kb on - strand at 4139.025 kb on - strand at 4139.254 kb on + strand at 4139.268 kb on + strand at 4139.268 kb on + strand at 4139.279 kb on + strand at 4139.294 kb on + strand at 4139.304 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.408 kb on + strand at 4139.409 kb on - strand at 4139.427 kb on + strand at 4139.509 kb on + strand at 4139.510 kb on - strand at 4139.608 kb on + strand, within CA264_17810 at 4139.609 kb on - strand, within CA264_17810 at 4139.649 kb on + strand, within CA264_17810 at 4139.650 kb on - strand, within CA264_17810 at 4139.650 kb on - strand, within CA264_17810 at 4139.660 kb on + strand, within CA264_17810 at 4139.682 kb on - strand, within CA264_17810 at 4139.929 kb on - strand, within CA264_17810 at 4140.011 kb on - strand, within CA264_17810 at 4140.011 kb on - strand, within CA264_17810 at 4140.011 kb on - strand, within CA264_17810 at 4140.013 kb on + strand, within CA264_17810 at 4140.033 kb on + strand, within CA264_17810 at 4140.078 kb on - strand, within CA264_17810 at 4140.161 kb on - strand, within CA264_17810 at 4140.440 kb on + strand, within CA264_17810 at 4140.440 kb on + strand, within CA264_17810 at 4140.440 kb on + strand, within CA264_17810 at 4140.461 kb on + strand, within CA264_17810 at 4140.461 kb on + strand, within CA264_17810 at 4140.462 kb on - strand, within CA264_17810 at 4140.496 kb on - strand, within CA264_17810 at 4140.496 kb on - strand, within CA264_17810 at 4140.500 kb on + strand, within CA264_17810 at 4140.500 kb on + strand, within CA264_17810 at 4140.501 kb on - strand, within CA264_17810 at 4140.501 kb on - strand, within CA264_17810 at 4140.501 kb on - strand, within CA264_17810 at 4140.502 kb on + strand, within CA264_17810 at 4140.502 kb on + strand, within CA264_17810 at 4140.502 kb on + strand, within CA264_17810 at 4140.502 kb on + strand, within CA264_17810 at 4140.503 kb on - strand, within CA264_17810 at 4140.505 kb on - strand, within CA264_17810 at 4140.857 kb on + strand, within CA264_17810 at 4140.858 kb on - strand, within CA264_17810 at 4140.863 kb on - strand, within CA264_17810 at 4140.891 kb on + strand, within CA264_17810 at 4140.934 kb on + strand, within CA264_17810 at 4140.935 kb on - strand, within CA264_17810 at 4141.051 kb on + strand, within CA264_17810 at 4141.052 kb on - strand, within CA264_17810 at 4141.132 kb on - strand, within CA264_17810 at 4141.142 kb on - strand, within CA264_17810 at 4141.155 kb on + strand, within CA264_17810 at 4141.267 kb on - strand, within CA264_17810 at 4141.360 kb on + strand, within CA264_17810 at 4141.360 kb on + strand, within CA264_17810 at 4141.459 kb on + strand, within CA264_17810 at 4141.460 kb on - strand, within CA264_17810 at 4141.462 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.548 kb on - strand, within CA264_17810 at 4141.636 kb on + strand at 4141.636 kb on + strand at 4141.636 kb on + strand at 4141.637 kb on - strand at 4141.637 kb on - strand at 4141.637 kb on - strand at 4141.833 kb on - strand at 4141.833 kb on - strand at 4141.879 kb on + strand at 4141.979 kb on + strand at 4141.979 kb on + strand at 4141.979 kb on + strand at 4141.987 kb on + strand at 4142.032 kb on - strand at 4142.080 kb on + strand at 4142.080 kb on + strand at 4142.114 kb on + strand at 4142.120 kb on + strand at 4142.161 kb on - strand at 4142.170 kb on + strand at 4142.222 kb on + strand at 4142.222 kb on + strand at 4142.222 kb on + strand at 4142.223 kb on - strand at 4142.223 kb on - strand at 4142.245 kb on + strand at 4142.245 kb on + strand at 4142.298 kb on + strand, within CA264_17815 at 4142.325 kb on - strand, within CA264_17815 at 4142.365 kb on + strand, within CA264_17815 at 4142.366 kb on - strand, within CA264_17815 at 4142.449 kb on - strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.452 kb on + strand, within CA264_17815 at 4142.453 kb on - strand, within CA264_17815 at 4142.460 kb on + strand, within CA264_17815 at 4142.472 kb on - strand, within CA264_17815 at 4142.503 kb on + strand, within CA264_17815 at 4142.504 kb on - strand, within CA264_17815
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,138,732 + -0.1 4,138,732 + -0.2 4,138,732 + +0.4 4,138,732 + -0.4 4,138,741 - +0.7 4,138,760 + +0.9 4,138,760 + +1.2 4,138,762 + +0.1 4,138,762 + +0.5 4,138,763 - +1.4 4,138,763 - -1.0 4,138,886 + CA264_17800 0.51 +1.3 4,138,887 - CA264_17800 0.52 -0.7 4,138,915 - +3.6 4,138,915 - +0.0 4,139,025 - +0.7 4,139,254 + +0.5 4,139,268 + +0.8 4,139,268 + -0.3 4,139,279 + -2.3 4,139,294 + +1.0 4,139,304 + +0.2 4,139,408 + +0.5 4,139,408 + +1.5 4,139,408 + -0.3 4,139,408 + +0.4 4,139,408 + -0.4 4,139,408 + +0.1 4,139,408 + +0.1 4,139,408 + -1.1 4,139,409 - +0.9 4,139,427 + -0.5 4,139,509 + -0.5 4,139,510 - +0.0 4,139,608 + CA264_17810 0.10 -1.7 4,139,609 - CA264_17810 0.10 +1.2 4,139,649 + CA264_17810 0.12 +0.5 4,139,650 - CA264_17810 0.12 +0.8 4,139,650 - CA264_17810 0.12 -0.8 4,139,660 + CA264_17810 0.13 +2.0 4,139,682 - CA264_17810 0.13 +0.2 4,139,929 - CA264_17810 0.23 +0.2 4,140,011 - CA264_17810 0.27 -0.2 4,140,011 - CA264_17810 0.27 +1.1 4,140,011 - CA264_17810 0.27 +1.3 4,140,013 + CA264_17810 0.27 -1.1 4,140,033 + CA264_17810 0.28 +0.6 4,140,078 - CA264_17810 0.29 -1.3 4,140,161 - CA264_17810 0.33 -0.4 4,140,440 + CA264_17810 0.44 +0.2 4,140,440 + CA264_17810 0.44 +1.5 4,140,440 + CA264_17810 0.44 +0.6 4,140,461 + CA264_17810 0.45 -0.1 4,140,461 + CA264_17810 0.45 +0.4 4,140,462 - CA264_17810 0.45 -0.2 4,140,496 - CA264_17810 0.46 +0.5 4,140,496 - CA264_17810 0.46 +0.2 4,140,500 + CA264_17810 0.46 +0.9 4,140,500 + CA264_17810 0.46 +0.1 4,140,501 - CA264_17810 0.46 +0.3 4,140,501 - CA264_17810 0.46 +0.6 4,140,501 - CA264_17810 0.46 +0.7 4,140,502 + CA264_17810 0.46 -0.3 4,140,502 + CA264_17810 0.46 -0.1 4,140,502 + CA264_17810 0.46 +0.4 4,140,502 + CA264_17810 0.46 +0.8 4,140,503 - CA264_17810 0.46 -0.0 4,140,505 - CA264_17810 0.47 +0.4 4,140,857 + CA264_17810 0.61 -0.1 4,140,858 - CA264_17810 0.61 +0.3 4,140,863 - CA264_17810 0.61 +1.0 4,140,891 + CA264_17810 0.62 -1.5 4,140,934 + CA264_17810 0.64 -0.3 4,140,935 - CA264_17810 0.64 -0.3 4,141,051 + CA264_17810 0.68 +1.9 4,141,052 - CA264_17810 0.69 +1.2 4,141,132 - CA264_17810 0.72 +0.5 4,141,142 - CA264_17810 0.72 +0.8 4,141,155 + CA264_17810 0.73 -0.1 4,141,267 - CA264_17810 0.77 +0.5 4,141,360 + CA264_17810 0.81 +0.2 4,141,360 + CA264_17810 0.81 -0.1 4,141,459 + CA264_17810 0.85 -1.5 4,141,460 - CA264_17810 0.85 +0.9 4,141,462 - CA264_17810 0.85 +0.1 4,141,548 - CA264_17810 0.88 +0.6 4,141,548 - CA264_17810 0.88 -1.2 4,141,548 - CA264_17810 0.88 +0.7 4,141,548 - CA264_17810 0.88 -0.1 4,141,636 + +0.8 4,141,636 + +0.7 4,141,636 + +0.3 4,141,637 - -0.0 4,141,637 - -1.0 4,141,637 - +0.4 4,141,833 - +0.7 4,141,833 - +0.8 4,141,879 + -0.4 4,141,979 + -0.7 4,141,979 + +0.2 4,141,979 + +0.0 4,141,987 + +0.0 4,142,032 - +0.3 4,142,080 + -1.0 4,142,080 + -1.6 4,142,114 + -1.0 4,142,120 + -0.6 4,142,161 - -0.6 4,142,170 + +0.3 4,142,222 + -0.5 4,142,222 + -0.5 4,142,222 + +0.4 4,142,223 - +1.0 4,142,223 - +0.4 4,142,245 + +0.0 4,142,245 + +0.1 4,142,298 + CA264_17815 0.11 +1.4 4,142,325 - CA264_17815 0.13 -0.0 4,142,365 + CA264_17815 0.17 -0.3 4,142,366 - CA264_17815 0.17 -1.4 4,142,449 - CA264_17815 0.24 -1.1 4,142,452 + CA264_17815 0.24 -0.4 4,142,452 + CA264_17815 0.24 -0.7 4,142,453 - CA264_17815 0.24 -2.2 4,142,460 + CA264_17815 0.25 +0.5 4,142,472 - CA264_17815 0.26 -1.6 4,142,503 + CA264_17815 0.28 -0.2 4,142,504 - CA264_17815 0.28 -1.7
Or see this region's nucleotide sequence