Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17585 and CA264_17590 are separated by 77 nucleotides CA264_17590 and CA264_17595 are separated by 47 nucleotides CA264_17595 and CA264_17600 are separated by 136 nucleotides CA264_17600 and CA264_17605 are separated by 49 nucleotides
CA264_17585: CA264_17585 - ribonuclease BN, at 4,097,213 to 4,098,238
_17585
CA264_17590: CA264_17590 - RidA family protein, at 4,098,316 to 4,098,696
_17590
CA264_17595: CA264_17595 - 3-hydroxyacyl-CoA dehydrogenase, at 4,098,744 to 4,099,421
_17595
CA264_17600: CA264_17600 - hypothetical protein, at 4,099,558 to 4,100,178
_17600
CA264_17605: CA264_17605 - glutamine--fructose-6-phosphate aminotransferase, at 4,100,228 to 4,102,063
_17605
Position (kb)
4098
4099
4100 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4097.816 kb on - strand, within CA264_17585 at 4097.816 kb on - strand, within CA264_17585 at 4097.819 kb on + strand, within CA264_17585 at 4097.819 kb on + strand, within CA264_17585 at 4097.820 kb on - strand, within CA264_17585 at 4097.879 kb on - strand, within CA264_17585 at 4098.041 kb on + strand, within CA264_17585 at 4098.068 kb on + strand, within CA264_17585 at 4098.317 kb on + strand at 4098.611 kb on + strand, within CA264_17590 at 4098.611 kb on + strand, within CA264_17590 at 4098.611 kb on + strand, within CA264_17590 at 4098.611 kb on + strand, within CA264_17590 at 4098.612 kb on - strand, within CA264_17590 at 4098.612 kb on - strand, within CA264_17590 at 4098.628 kb on + strand, within CA264_17590 at 4098.688 kb on - strand at 4098.688 kb on - strand at 4098.688 kb on - strand at 4098.688 kb on - strand at 4098.688 kb on - strand at 4098.688 kb on - strand at 4098.710 kb on + strand at 4098.710 kb on + strand at 4098.711 kb on - strand at 4098.717 kb on + strand at 4098.723 kb on + strand at 4098.743 kb on + strand at 4098.743 kb on + strand at 4098.744 kb on - strand at 4098.751 kb on + strand at 4098.751 kb on + strand at 4098.751 kb on + strand at 4098.752 kb on - strand at 4098.752 kb on - strand at 4098.752 kb on - strand at 4098.825 kb on + strand, within CA264_17595 at 4098.826 kb on - strand, within CA264_17595 at 4098.826 kb on - strand, within CA264_17595 at 4098.827 kb on + strand, within CA264_17595 at 4099.185 kb on - strand, within CA264_17595 at 4099.185 kb on - strand, within CA264_17595 at 4099.185 kb on - strand, within CA264_17595 at 4099.209 kb on - strand, within CA264_17595 at 4099.233 kb on - strand, within CA264_17595 at 4099.234 kb on + strand, within CA264_17595 at 4099.323 kb on + strand, within CA264_17595 at 4099.345 kb on - strand, within CA264_17595 at 4099.369 kb on - strand at 4099.376 kb on - strand at 4099.420 kb on - strand at 4099.426 kb on - strand at 4099.428 kb on - strand at 4099.428 kb on - strand at 4099.428 kb on - strand at 4099.495 kb on - strand at 4099.502 kb on + strand at 4099.502 kb on + strand at 4099.502 kb on + strand at 4099.546 kb on - strand at 4099.547 kb on + strand at 4099.547 kb on + strand at 4099.547 kb on + strand at 4099.547 kb on + strand at 4099.548 kb on - strand at 4099.553 kb on - strand at 4099.582 kb on - strand at 4099.584 kb on - strand at 4099.596 kb on - strand at 4099.602 kb on + strand at 4099.603 kb on - strand at 4099.638 kb on + strand, within CA264_17600 at 4099.639 kb on - strand, within CA264_17600 at 4099.639 kb on - strand, within CA264_17600 at 4099.639 kb on - strand, within CA264_17600 at 4099.682 kb on - strand, within CA264_17600 at 4099.743 kb on + strand, within CA264_17600 at 4099.747 kb on + strand, within CA264_17600 at 4099.747 kb on + strand, within CA264_17600 at 4099.774 kb on + strand, within CA264_17600 at 4099.873 kb on + strand, within CA264_17600 at 4099.874 kb on - strand, within CA264_17600 at 4099.875 kb on + strand, within CA264_17600 at 4099.876 kb on - strand, within CA264_17600 at 4099.876 kb on - strand, within CA264_17600 at 4099.948 kb on + strand, within CA264_17600 at 4100.003 kb on + strand, within CA264_17600 at 4100.040 kb on - strand, within CA264_17600 at 4100.040 kb on - strand, within CA264_17600 at 4100.091 kb on + strand, within CA264_17600 at 4100.207 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,097,816 - CA264_17585 0.59 +1.1 4,097,816 - CA264_17585 0.59 +0.4 4,097,819 + CA264_17585 0.59 -0.6 4,097,819 + CA264_17585 0.59 +0.3 4,097,820 - CA264_17585 0.59 +0.5 4,097,879 - CA264_17585 0.65 -0.8 4,098,041 + CA264_17585 0.81 -1.3 4,098,068 + CA264_17585 0.83 +0.2 4,098,317 + -0.1 4,098,611 + CA264_17590 0.77 +0.3 4,098,611 + CA264_17590 0.77 +0.0 4,098,611 + CA264_17590 0.77 +0.2 4,098,611 + CA264_17590 0.77 +0.5 4,098,612 - CA264_17590 0.78 +0.6 4,098,612 - CA264_17590 0.78 -0.1 4,098,628 + CA264_17590 0.82 -0.3 4,098,688 - +0.7 4,098,688 - +1.1 4,098,688 - +0.2 4,098,688 - -2.5 4,098,688 - +0.3 4,098,688 - -0.9 4,098,710 + -0.6 4,098,710 + +0.9 4,098,711 - +0.1 4,098,717 + -0.4 4,098,723 + -0.6 4,098,743 + +0.2 4,098,743 + +0.1 4,098,744 - +0.6 4,098,751 + -0.7 4,098,751 + -0.4 4,098,751 + -1.0 4,098,752 - +0.8 4,098,752 - +0.8 4,098,752 - +1.2 4,098,825 + CA264_17595 0.12 -0.3 4,098,826 - CA264_17595 0.12 -0.1 4,098,826 - CA264_17595 0.12 +0.3 4,098,827 + CA264_17595 0.12 +0.4 4,099,185 - CA264_17595 0.65 +0.4 4,099,185 - CA264_17595 0.65 +0.8 4,099,185 - CA264_17595 0.65 -0.3 4,099,209 - CA264_17595 0.69 +0.9 4,099,233 - CA264_17595 0.72 +0.3 4,099,234 + CA264_17595 0.72 -0.2 4,099,323 + CA264_17595 0.85 -0.3 4,099,345 - CA264_17595 0.89 -1.1 4,099,369 - +0.5 4,099,376 - +0.1 4,099,420 - -0.5 4,099,426 - +0.2 4,099,428 - +0.8 4,099,428 - -0.6 4,099,428 - +0.0 4,099,495 - -0.8 4,099,502 + -2.3 4,099,502 + -0.2 4,099,502 + +0.2 4,099,546 - -0.5 4,099,547 + +0.6 4,099,547 + -0.0 4,099,547 + -1.0 4,099,547 + -1.6 4,099,548 - +1.6 4,099,553 - -0.8 4,099,582 - -0.1 4,099,584 - -0.7 4,099,596 - +1.9 4,099,602 + +0.6 4,099,603 - -0.1 4,099,638 + CA264_17600 0.13 +0.1 4,099,639 - CA264_17600 0.13 -1.2 4,099,639 - CA264_17600 0.13 +0.7 4,099,639 - CA264_17600 0.13 +0.2 4,099,682 - CA264_17600 0.20 +0.2 4,099,743 + CA264_17600 0.30 -0.6 4,099,747 + CA264_17600 0.30 +0.1 4,099,747 + CA264_17600 0.30 +1.6 4,099,774 + CA264_17600 0.35 -0.3 4,099,873 + CA264_17600 0.51 -0.2 4,099,874 - CA264_17600 0.51 -1.3 4,099,875 + CA264_17600 0.51 -0.1 4,099,876 - CA264_17600 0.51 -0.2 4,099,876 - CA264_17600 0.51 -0.5 4,099,948 + CA264_17600 0.63 -1.0 4,100,003 + CA264_17600 0.72 -1.9 4,100,040 - CA264_17600 0.78 -0.1 4,100,040 - CA264_17600 0.78 +1.1 4,100,091 + CA264_17600 0.86 -1.2 4,100,207 + -2.9
Or see this region's nucleotide sequence