Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17570 and CA264_17575 are separated by 124 nucleotides CA264_17575 and CA264_17580 are separated by 131 nucleotides CA264_17580 and CA264_17585 are separated by 180 nucleotides
CA264_17570: CA264_17570 - TIGR00266 family protein, at 4,094,105 to 4,094,872
_17570
CA264_17575: CA264_17575 - hypothetical protein, at 4,094,997 to 4,095,359
_17575
CA264_17580: CA264_17580 - glutamate--tRNA ligase, at 4,095,491 to 4,097,032
_17580
CA264_17585: CA264_17585 - ribonuclease BN, at 4,097,213 to 4,098,238
_17585
Position (kb)
4095
4096
4097
4098 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4094.641 kb on + strand, within CA264_17570 at 4094.760 kb on + strand, within CA264_17570 at 4094.760 kb on + strand, within CA264_17570 at 4094.848 kb on - strand at 4094.852 kb on + strand at 4094.879 kb on - strand at 4094.879 kb on - strand at 4094.879 kb on - strand at 4094.887 kb on + strand at 4094.888 kb on - strand at 4094.888 kb on - strand at 4094.895 kb on + strand at 4094.944 kb on + strand at 4094.972 kb on - strand at 4094.979 kb on - strand at 4094.979 kb on - strand at 4094.999 kb on - strand at 4095.135 kb on + strand, within CA264_17575 at 4095.136 kb on - strand, within CA264_17575 at 4095.142 kb on + strand, within CA264_17575 at 4095.143 kb on - strand, within CA264_17575 at 4095.143 kb on - strand, within CA264_17575 at 4095.193 kb on - strand, within CA264_17575 at 4095.201 kb on - strand, within CA264_17575 at 4095.240 kb on + strand, within CA264_17575 at 4095.240 kb on + strand, within CA264_17575 at 4095.241 kb on - strand, within CA264_17575 at 4095.378 kb on - strand at 4095.380 kb on - strand at 4095.383 kb on + strand at 4095.384 kb on - strand at 4095.390 kb on - strand at 4095.521 kb on - strand at 4097.034 kb on + strand at 4097.034 kb on + strand at 4097.035 kb on - strand at 4097.054 kb on + strand at 4097.094 kb on - strand at 4097.097 kb on + strand at 4097.115 kb on + strand at 4097.115 kb on + strand at 4097.116 kb on - strand at 4097.154 kb on + strand at 4097.162 kb on + strand at 4097.162 kb on + strand at 4097.163 kb on - strand at 4097.171 kb on - strand at 4097.186 kb on + strand at 4097.190 kb on - strand at 4097.191 kb on + strand at 4097.192 kb on - strand at 4097.199 kb on + strand at 4097.199 kb on + strand at 4097.217 kb on + strand at 4097.217 kb on + strand at 4097.221 kb on + strand at 4097.222 kb on - strand at 4097.231 kb on + strand at 4097.243 kb on + strand at 4097.244 kb on - strand at 4097.250 kb on + strand at 4097.251 kb on - strand at 4097.261 kb on + strand at 4097.261 kb on + strand at 4097.261 kb on + strand at 4097.262 kb on - strand at 4097.272 kb on + strand at 4097.312 kb on + strand at 4097.315 kb on + strand at 4097.316 kb on - strand, within CA264_17585 at 4097.403 kb on + strand, within CA264_17585 at 4097.403 kb on + strand, within CA264_17585 at 4097.404 kb on - strand, within CA264_17585 at 4097.404 kb on - strand, within CA264_17585 at 4097.405 kb on + strand, within CA264_17585 at 4097.405 kb on + strand, within CA264_17585 at 4097.405 kb on + strand, within CA264_17585 at 4097.406 kb on - strand, within CA264_17585 at 4097.408 kb on + strand, within CA264_17585 at 4097.409 kb on - strand, within CA264_17585 at 4097.472 kb on + strand, within CA264_17585 at 4097.586 kb on + strand, within CA264_17585 at 4097.586 kb on + strand, within CA264_17585 at 4097.586 kb on + strand, within CA264_17585 at 4097.609 kb on + strand, within CA264_17585 at 4097.816 kb on - strand, within CA264_17585 at 4097.816 kb on - strand, within CA264_17585 at 4097.819 kb on + strand, within CA264_17585 at 4097.819 kb on + strand, within CA264_17585 at 4097.820 kb on - strand, within CA264_17585 at 4097.879 kb on - strand, within CA264_17585
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,094,641 + CA264_17570 0.70 -1.8 4,094,760 + CA264_17570 0.85 -2.8 4,094,760 + CA264_17570 0.85 -2.9 4,094,848 - -4.2 4,094,852 + +0.4 4,094,879 - +0.1 4,094,879 - +0.1 4,094,879 - -0.0 4,094,887 + +0.3 4,094,888 - +1.3 4,094,888 - +1.0 4,094,895 + -0.2 4,094,944 + +2.6 4,094,972 - +1.3 4,094,979 - -0.1 4,094,979 - -0.1 4,094,999 - +0.9 4,095,135 + CA264_17575 0.38 +1.0 4,095,136 - CA264_17575 0.38 +0.3 4,095,142 + CA264_17575 0.40 +1.8 4,095,143 - CA264_17575 0.40 +1.3 4,095,143 - CA264_17575 0.40 -0.4 4,095,193 - CA264_17575 0.54 -0.2 4,095,201 - CA264_17575 0.56 +1.4 4,095,240 + CA264_17575 0.67 +0.9 4,095,240 + CA264_17575 0.67 +0.9 4,095,241 - CA264_17575 0.67 +0.4 4,095,378 - +0.6 4,095,380 - +1.2 4,095,383 + -1.3 4,095,384 - +1.2 4,095,390 - +1.2 4,095,521 - -1.7 4,097,034 + +0.8 4,097,034 + +0.9 4,097,035 - +0.6 4,097,054 + -0.6 4,097,094 - +0.0 4,097,097 + -0.7 4,097,115 + +1.1 4,097,115 + +0.7 4,097,116 - -0.9 4,097,154 + -0.2 4,097,162 + +0.6 4,097,162 + +0.9 4,097,163 - -0.2 4,097,171 - -1.5 4,097,186 + +0.7 4,097,190 - -0.6 4,097,191 + -0.4 4,097,192 - +1.4 4,097,199 + -0.1 4,097,199 + +0.2 4,097,217 + +1.1 4,097,217 + +0.4 4,097,221 + -0.1 4,097,222 - +0.4 4,097,231 + -0.5 4,097,243 + +0.1 4,097,244 - -0.8 4,097,250 + +0.5 4,097,251 - -0.4 4,097,261 + +1.0 4,097,261 + +0.4 4,097,261 + +0.5 4,097,262 - +0.5 4,097,272 + +1.1 4,097,312 + +1.3 4,097,315 + -0.1 4,097,316 - CA264_17585 0.10 -0.1 4,097,403 + CA264_17585 0.19 -0.2 4,097,403 + CA264_17585 0.19 -1.3 4,097,404 - CA264_17585 0.19 -1.7 4,097,404 - CA264_17585 0.19 -0.0 4,097,405 + CA264_17585 0.19 -1.2 4,097,405 + CA264_17585 0.19 +0.6 4,097,405 + CA264_17585 0.19 -1.2 4,097,406 - CA264_17585 0.19 +1.0 4,097,408 + CA264_17585 0.19 -1.0 4,097,409 - CA264_17585 0.19 -0.6 4,097,472 + CA264_17585 0.25 -0.8 4,097,586 + CA264_17585 0.36 -0.7 4,097,586 + CA264_17585 0.36 +0.4 4,097,586 + CA264_17585 0.36 +0.4 4,097,609 + CA264_17585 0.39 +0.2 4,097,816 - CA264_17585 0.59 +1.1 4,097,816 - CA264_17585 0.59 +0.4 4,097,819 + CA264_17585 0.59 -0.6 4,097,819 + CA264_17585 0.59 +0.3 4,097,820 - CA264_17585 0.59 +0.5 4,097,879 - CA264_17585 0.65 -0.8
Or see this region's nucleotide sequence