Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17325 and CA264_17330 are separated by 136 nucleotides CA264_17330 and CA264_17335 are separated by 415 nucleotides
CA264_17325: CA264_17325 - isoleucine--tRNA ligase, at 4,036,291 to 4,039,644
_17325
CA264_17330: CA264_17330 - lipoprotein signal peptidase, at 4,039,781 to 4,040,404
_17330
CA264_17335: CA264_17335 - HAD family hydrolase, at 4,040,820 to 4,041,425
_17335
Position (kb)
4039
4040
4041 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 4039.646 kb on + strand at 4039.678 kb on + strand at 4039.692 kb on + strand at 4039.693 kb on - strand at 4039.694 kb on + strand at 4039.717 kb on + strand at 4039.720 kb on + strand at 4039.721 kb on - strand at 4039.742 kb on - strand at 4039.742 kb on - strand at 4039.749 kb on - strand at 4039.769 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.410 kb on + strand at 4040.427 kb on - strand at 4040.490 kb on + strand at 4040.523 kb on + strand at 4040.532 kb on - strand at 4040.560 kb on + strand at 4040.560 kb on + strand at 4040.573 kb on - strand at 4040.573 kb on - strand at 4040.575 kb on - strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.614 kb on + strand at 4040.615 kb on - strand at 4040.741 kb on + strand at 4040.744 kb on - strand at 4041.109 kb on + strand, within CA264_17335 at 4041.113 kb on + strand, within CA264_17335 at 4041.114 kb on - strand, within CA264_17335 at 4041.159 kb on - strand, within CA264_17335 at 4041.200 kb on - strand, within CA264_17335 at 4041.209 kb on + strand, within CA264_17335 at 4041.210 kb on - strand, within CA264_17335 at 4041.246 kb on + strand, within CA264_17335 at 4041.246 kb on + strand, within CA264_17335 at 4041.247 kb on - strand, within CA264_17335 at 4041.326 kb on - strand, within CA264_17335 at 4041.326 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335 at 4041.328 kb on - strand, within CA264_17335
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 4,039,646 + +2.6 4,039,678 + +3.2 4,039,692 + +4.5 4,039,693 - +1.7 4,039,694 + +2.1 4,039,717 + +5.4 4,039,720 + +5.7 4,039,721 - +3.9 4,039,742 - +3.3 4,039,742 - +3.8 4,039,749 - +3.5 4,039,769 + +4.1 4,040,410 + -1.6 4,040,410 + -0.7 4,040,410 + -0.2 4,040,427 - -2.0 4,040,490 + -0.4 4,040,523 + -0.6 4,040,532 - -1.1 4,040,560 + -0.4 4,040,560 + +0.4 4,040,573 - -0.4 4,040,573 - -1.9 4,040,575 - -0.3 4,040,614 + +1.7 4,040,614 + -0.6 4,040,614 + +0.8 4,040,615 - +1.4 4,040,741 + +0.3 4,040,744 - -1.4 4,041,109 + CA264_17335 0.48 -0.0 4,041,113 + CA264_17335 0.48 -0.8 4,041,114 - CA264_17335 0.49 -2.0 4,041,159 - CA264_17335 0.56 -1.9 4,041,200 - CA264_17335 0.63 -0.6 4,041,209 + CA264_17335 0.64 -0.8 4,041,210 - CA264_17335 0.64 -0.4 4,041,246 + CA264_17335 0.70 -0.5 4,041,246 + CA264_17335 0.70 +0.7 4,041,247 - CA264_17335 0.70 +0.0 4,041,326 - CA264_17335 0.83 -2.8 4,041,326 - CA264_17335 0.83 -2.1 4,041,328 - CA264_17335 0.84 +0.7 4,041,328 - CA264_17335 0.84 -1.0 4,041,328 - CA264_17335 0.84 -0.8
Or see this region's nucleotide sequence