Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17055 and CA264_17060 are separated by 105 nucleotides CA264_17060 and CA264_17065 are separated by 82 nucleotides CA264_17065 and CA264_17070 are separated by 81 nucleotides CA264_17070 and CA264_17075 are separated by 119 nucleotides CA264_17075 and CA264_17080 are separated by 127 nucleotides
CA264_17055: CA264_17055 - serine/threonine protein phosphatase, at 3,973,444 to 3,974,139
_17055
CA264_17060: CA264_17060 - hypothetical protein, at 3,974,245 to 3,974,484
_17060
CA264_17065: CA264_17065 - hypothetical protein, at 3,974,567 to 3,974,869
_17065
CA264_17070: CA264_17070 - NAD(P)-dependent oxidoreductase, at 3,974,951 to 3,975,817
_17070
CA264_17075: CA264_17075 - pterin-4-alpha-carbinolamine dehydratase, at 3,975,937 to 3,976,191
_17075
CA264_17080: CA264_17080 - rRNA (cytidine-2'-O-)-methyltransferase, at 3,976,319 to 3,977,029
_17080
Position (kb)
3974
3975
3976 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3973.988 kb on + strand, within CA264_17055 at 3974.113 kb on + strand at 3974.113 kb on + strand at 3974.114 kb on - strand at 3974.237 kb on - strand at 3974.246 kb on + strand at 3974.246 kb on + strand at 3974.251 kb on - strand at 3974.252 kb on + strand at 3974.252 kb on + strand at 3974.253 kb on - strand at 3974.287 kb on - strand, within CA264_17060 at 3974.340 kb on + strand, within CA264_17060 at 3974.341 kb on - strand, within CA264_17060 at 3974.472 kb on + strand at 3974.472 kb on + strand at 3974.473 kb on - strand at 3974.473 kb on - strand at 3974.473 kb on - strand at 3974.474 kb on + strand at 3974.474 kb on + strand at 3974.475 kb on - strand at 3974.504 kb on + strand at 3974.530 kb on + strand at 3974.531 kb on - strand at 3974.532 kb on + strand at 3974.532 kb on + strand at 3974.532 kb on + strand at 3974.532 kb on + strand at 3974.532 kb on + strand at 3974.533 kb on - strand at 3974.671 kb on + strand, within CA264_17065 at 3974.671 kb on + strand, within CA264_17065 at 3974.672 kb on - strand, within CA264_17065 at 3974.672 kb on - strand, within CA264_17065 at 3974.753 kb on + strand, within CA264_17065 at 3974.753 kb on + strand, within CA264_17065 at 3974.756 kb on + strand, within CA264_17065 at 3974.798 kb on + strand, within CA264_17065 at 3974.799 kb on - strand, within CA264_17065 at 3974.837 kb on + strand, within CA264_17065 at 3974.851 kb on + strand at 3974.857 kb on + strand at 3974.869 kb on + strand at 3974.870 kb on - strand at 3974.922 kb on + strand at 3974.957 kb on - strand at 3974.957 kb on - strand at 3974.957 kb on - strand at 3974.961 kb on - strand at 3974.961 kb on - strand at 3974.999 kb on - strand at 3975.001 kb on + strand at 3975.001 kb on + strand at 3975.001 kb on + strand at 3975.002 kb on - strand at 3975.002 kb on - strand at 3975.003 kb on + strand at 3975.003 kb on + strand at 3975.003 kb on + strand at 3975.004 kb on - strand at 3975.004 kb on - strand at 3975.004 kb on - strand at 3975.029 kb on + strand at 3975.029 kb on + strand at 3975.029 kb on + strand at 3975.029 kb on + strand at 3975.029 kb on + strand at 3975.029 kb on + strand at 3975.029 kb on + strand at 3975.030 kb on - strand at 3975.030 kb on - strand at 3975.030 kb on - strand at 3975.034 kb on - strand at 3975.164 kb on + strand, within CA264_17070 at 3975.275 kb on + strand, within CA264_17070 at 3975.339 kb on + strand, within CA264_17070 at 3975.340 kb on - strand, within CA264_17070 at 3975.364 kb on + strand, within CA264_17070 at 3975.364 kb on + strand, within CA264_17070 at 3975.392 kb on + strand, within CA264_17070 at 3975.467 kb on + strand, within CA264_17070 at 3975.479 kb on + strand, within CA264_17070 at 3975.685 kb on + strand, within CA264_17070 at 3975.686 kb on - strand, within CA264_17070 at 3975.711 kb on + strand, within CA264_17070 at 3975.712 kb on - strand, within CA264_17070 at 3975.712 kb on - strand, within CA264_17070 at 3975.748 kb on + strand at 3975.748 kb on + strand at 3975.751 kb on - strand at 3975.831 kb on + strand at 3975.852 kb on + strand at 3975.852 kb on + strand at 3975.852 kb on + strand at 3975.853 kb on - strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.856 kb on + strand at 3975.857 kb on - strand at 3975.857 kb on - strand at 3975.857 kb on - strand at 3975.858 kb on + strand at 3975.918 kb on + strand at 3975.957 kb on + strand at 3975.958 kb on - strand at 3975.976 kb on - strand, within CA264_17075 at 3975.976 kb on - strand, within CA264_17075 at 3975.990 kb on + strand, within CA264_17075 at 3975.991 kb on - strand, within CA264_17075 at 3976.028 kb on + strand, within CA264_17075 at 3976.029 kb on - strand, within CA264_17075 at 3976.029 kb on - strand, within CA264_17075 at 3976.069 kb on + strand, within CA264_17075 at 3976.085 kb on + strand, within CA264_17075 at 3976.206 kb on + strand at 3976.235 kb on + strand at 3976.236 kb on - strand at 3976.314 kb on - strand at 3976.347 kb on - strand at 3976.390 kb on - strand, within CA264_17080 at 3976.409 kb on - strand, within CA264_17080 at 3976.423 kb on + strand, within CA264_17080 at 3976.424 kb on - strand, within CA264_17080 at 3976.425 kb on + strand, within CA264_17080
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,973,988 + CA264_17055 0.78 -0.7 3,974,113 + -0.7 3,974,113 + -1.0 3,974,114 - +0.3 3,974,237 - -0.3 3,974,246 + +0.8 3,974,246 + +0.2 3,974,251 - -0.2 3,974,252 + +0.6 3,974,252 + -0.2 3,974,253 - -0.4 3,974,287 - CA264_17060 0.17 -0.0 3,974,340 + CA264_17060 0.40 +0.3 3,974,341 - CA264_17060 0.40 -0.2 3,974,472 + +0.4 3,974,472 + +0.4 3,974,473 - -0.6 3,974,473 - +1.0 3,974,473 - -1.5 3,974,474 + +0.3 3,974,474 + -0.3 3,974,475 - -1.3 3,974,504 + +0.9 3,974,530 + -0.5 3,974,531 - +0.2 3,974,532 + -0.5 3,974,532 + +1.0 3,974,532 + +1.2 3,974,532 + +0.1 3,974,532 + +1.1 3,974,533 - +0.1 3,974,671 + CA264_17065 0.34 +0.5 3,974,671 + CA264_17065 0.34 +0.6 3,974,672 - CA264_17065 0.35 +0.1 3,974,672 - CA264_17065 0.35 +0.1 3,974,753 + CA264_17065 0.61 -0.2 3,974,753 + CA264_17065 0.61 +0.6 3,974,756 + CA264_17065 0.62 +0.1 3,974,798 + CA264_17065 0.76 -0.6 3,974,799 - CA264_17065 0.77 +0.2 3,974,837 + CA264_17065 0.89 -1.4 3,974,851 + -1.0 3,974,857 + -0.9 3,974,869 + +0.8 3,974,870 - -0.3 3,974,922 + -0.3 3,974,957 - +0.8 3,974,957 - -0.1 3,974,957 - -0.2 3,974,961 - -0.4 3,974,961 - +0.8 3,974,999 - -0.8 3,975,001 + -0.3 3,975,001 + +0.8 3,975,001 + +0.2 3,975,002 - +0.1 3,975,002 - -0.6 3,975,003 + +0.3 3,975,003 + -0.3 3,975,003 + -0.4 3,975,004 - -1.0 3,975,004 - +0.4 3,975,004 - -0.9 3,975,029 + -1.7 3,975,029 + +0.3 3,975,029 + +0.2 3,975,029 + +0.4 3,975,029 + -0.3 3,975,029 + +0.1 3,975,029 + +0.8 3,975,030 - +2.0 3,975,030 - -0.1 3,975,030 - -1.2 3,975,034 - -0.9 3,975,164 + CA264_17070 0.25 +0.1 3,975,275 + CA264_17070 0.37 +0.4 3,975,339 + CA264_17070 0.45 +0.0 3,975,340 - CA264_17070 0.45 -0.5 3,975,364 + CA264_17070 0.48 +1.4 3,975,364 + CA264_17070 0.48 +0.2 3,975,392 + CA264_17070 0.51 +0.2 3,975,467 + CA264_17070 0.60 +0.1 3,975,479 + CA264_17070 0.61 -0.4 3,975,685 + CA264_17070 0.85 +0.7 3,975,686 - CA264_17070 0.85 +0.9 3,975,711 + CA264_17070 0.88 +0.6 3,975,712 - CA264_17070 0.88 -0.3 3,975,712 - CA264_17070 0.88 -0.2 3,975,748 + +1.0 3,975,748 + +0.3 3,975,751 - -0.1 3,975,831 + +1.1 3,975,852 + +0.4 3,975,852 + +1.8 3,975,852 + -2.5 3,975,853 - +0.1 3,975,856 + +1.4 3,975,856 + +0.4 3,975,856 + -0.6 3,975,856 + -0.3 3,975,856 + +0.0 3,975,857 - -0.4 3,975,857 - -0.9 3,975,857 - -0.7 3,975,858 + -0.6 3,975,918 + +0.3 3,975,957 + -3.3 3,975,958 - -2.3 3,975,976 - CA264_17075 0.15 -1.5 3,975,976 - CA264_17075 0.15 -3.0 3,975,990 + CA264_17075 0.21 -1.3 3,975,991 - CA264_17075 0.21 -1.6 3,976,028 + CA264_17075 0.36 -1.3 3,976,029 - CA264_17075 0.36 -2.8 3,976,029 - CA264_17075 0.36 -1.9 3,976,069 + CA264_17075 0.52 -3.3 3,976,085 + CA264_17075 0.58 -1.3 3,976,206 + +2.0 3,976,235 + -0.4 3,976,236 - -1.5 3,976,314 - +1.5 3,976,347 - +1.6 3,976,390 - CA264_17080 0.10 +1.5 3,976,409 - CA264_17080 0.13 +1.7 3,976,423 + CA264_17080 0.15 +1.6 3,976,424 - CA264_17080 0.15 +3.0 3,976,425 + CA264_17080 0.15 +1.7
Or see this region's nucleotide sequence