Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15625 and CA264_15630 are separated by 204 nucleotides CA264_15630 and CA264_15635 are separated by 91 nucleotides
CA264_15625: CA264_15625 - sterol desaturase, at 3,652,488 to 3,653,270
_15625
CA264_15630: CA264_15630 - haloacid dehalogenase, type II, at 3,653,475 to 3,654,173
_15630
CA264_15635: CA264_15635 - hypothetical protein, at 3,654,265 to 3,655,440
_15635
Position (kb)
3653
3654
3655 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3652.491 kb on + strand at 3652.492 kb on - strand at 3652.547 kb on + strand at 3652.556 kb on + strand at 3652.598 kb on - strand, within CA264_15625 at 3652.607 kb on - strand, within CA264_15625 at 3652.720 kb on + strand, within CA264_15625 at 3652.720 kb on + strand, within CA264_15625 at 3652.721 kb on - strand, within CA264_15625 at 3652.729 kb on + strand, within CA264_15625 at 3652.730 kb on - strand, within CA264_15625 at 3652.765 kb on + strand, within CA264_15625 at 3652.875 kb on - strand, within CA264_15625 at 3652.875 kb on - strand, within CA264_15625 at 3652.875 kb on - strand, within CA264_15625 at 3652.922 kb on + strand, within CA264_15625 at 3652.923 kb on - strand, within CA264_15625 at 3652.923 kb on - strand, within CA264_15625 at 3652.942 kb on + strand, within CA264_15625 at 3652.942 kb on + strand, within CA264_15625 at 3652.942 kb on + strand, within CA264_15625 at 3652.942 kb on + strand, within CA264_15625 at 3652.942 kb on + strand, within CA264_15625 at 3652.943 kb on - strand, within CA264_15625 at 3652.943 kb on - strand, within CA264_15625 at 3652.988 kb on - strand, within CA264_15625 at 3653.000 kb on - strand, within CA264_15625 at 3653.098 kb on + strand, within CA264_15625 at 3653.116 kb on + strand, within CA264_15625 at 3653.218 kb on + strand at 3653.219 kb on - strand at 3653.219 kb on - strand at 3653.277 kb on - strand at 3653.277 kb on - strand at 3653.283 kb on + strand at 3653.283 kb on + strand at 3653.284 kb on - strand at 3653.284 kb on - strand at 3653.288 kb on - strand at 3653.294 kb on + strand at 3653.294 kb on + strand at 3653.295 kb on - strand at 3653.296 kb on + strand at 3653.300 kb on + strand at 3653.300 kb on + strand at 3653.301 kb on - strand at 3653.301 kb on - strand at 3653.306 kb on + strand at 3653.307 kb on - strand at 3653.307 kb on - strand at 3653.307 kb on - strand at 3653.307 kb on - strand at 3653.312 kb on + strand at 3653.312 kb on + strand at 3653.423 kb on - strand at 3653.426 kb on + strand at 3653.427 kb on - strand at 3653.427 kb on - strand at 3653.454 kb on + strand at 3653.454 kb on + strand at 3653.530 kb on + strand at 3653.530 kb on + strand at 3653.603 kb on + strand, within CA264_15630 at 3653.623 kb on + strand, within CA264_15630 at 3653.623 kb on + strand, within CA264_15630 at 3653.624 kb on - strand, within CA264_15630 at 3653.657 kb on + strand, within CA264_15630 at 3653.661 kb on + strand, within CA264_15630 at 3653.662 kb on - strand, within CA264_15630 at 3653.729 kb on - strand, within CA264_15630 at 3653.729 kb on - strand, within CA264_15630 at 3653.962 kb on - strand, within CA264_15630 at 3654.097 kb on - strand, within CA264_15630 at 3654.166 kb on + strand at 3654.182 kb on + strand at 3654.183 kb on - strand at 3654.183 kb on - strand at 3654.238 kb on + strand at 3654.239 kb on - strand at 3654.249 kb on + strand at 3654.249 kb on + strand at 3654.249 kb on + strand at 3654.250 kb on - strand at 3654.250 kb on - strand at 3654.250 kb on - strand at 3654.275 kb on + strand at 3654.276 kb on - strand at 3654.349 kb on - strand at 3654.491 kb on + strand, within CA264_15635 at 3654.569 kb on + strand, within CA264_15635 at 3654.570 kb on - strand, within CA264_15635 at 3654.603 kb on + strand, within CA264_15635 at 3654.604 kb on - strand, within CA264_15635 at 3654.604 kb on - strand, within CA264_15635 at 3654.622 kb on + strand, within CA264_15635 at 3654.623 kb on - strand, within CA264_15635 at 3654.624 kb on + strand, within CA264_15635 at 3654.624 kb on + strand, within CA264_15635 at 3654.624 kb on + strand, within CA264_15635 at 3654.624 kb on + strand, within CA264_15635 at 3654.625 kb on - strand, within CA264_15635 at 3654.625 kb on - strand, within CA264_15635 at 3654.625 kb on - strand, within CA264_15635 at 3654.625 kb on - strand, within CA264_15635 at 3654.625 kb on - strand, within CA264_15635 at 3654.625 kb on - strand, within CA264_15635 at 3654.701 kb on + strand, within CA264_15635 at 3654.701 kb on + strand, within CA264_15635 at 3654.701 kb on + strand, within CA264_15635 at 3654.702 kb on - strand, within CA264_15635 at 3654.744 kb on - strand, within CA264_15635 at 3654.763 kb on - strand, within CA264_15635 at 3654.783 kb on + strand, within CA264_15635 at 3654.835 kb on - strand, within CA264_15635 at 3654.860 kb on + strand, within CA264_15635 at 3654.860 kb on + strand, within CA264_15635 at 3654.861 kb on - strand, within CA264_15635 at 3654.927 kb on - strand, within CA264_15635 at 3654.927 kb on - strand, within CA264_15635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,652,491 + -0.3 3,652,492 - -0.2 3,652,547 + -0.1 3,652,556 + -0.1 3,652,598 - CA264_15625 0.14 -0.6 3,652,607 - CA264_15625 0.15 -0.2 3,652,720 + CA264_15625 0.30 -0.1 3,652,720 + CA264_15625 0.30 -0.9 3,652,721 - CA264_15625 0.30 -0.4 3,652,729 + CA264_15625 0.31 +0.5 3,652,730 - CA264_15625 0.31 +1.1 3,652,765 + CA264_15625 0.35 +0.4 3,652,875 - CA264_15625 0.49 -0.7 3,652,875 - CA264_15625 0.49 -0.5 3,652,875 - CA264_15625 0.49 -0.3 3,652,922 + CA264_15625 0.55 -1.3 3,652,923 - CA264_15625 0.56 -0.0 3,652,923 - CA264_15625 0.56 -0.2 3,652,942 + CA264_15625 0.58 +0.3 3,652,942 + CA264_15625 0.58 -0.5 3,652,942 + CA264_15625 0.58 -1.8 3,652,942 + CA264_15625 0.58 -0.0 3,652,942 + CA264_15625 0.58 -0.5 3,652,943 - CA264_15625 0.58 -0.6 3,652,943 - CA264_15625 0.58 +0.4 3,652,988 - CA264_15625 0.64 -0.1 3,653,000 - CA264_15625 0.65 -0.9 3,653,098 + CA264_15625 0.78 -0.1 3,653,116 + CA264_15625 0.80 -0.7 3,653,218 + -0.1 3,653,219 - +0.9 3,653,219 - +0.5 3,653,277 - -0.4 3,653,277 - -0.6 3,653,283 + -0.3 3,653,283 + +0.3 3,653,284 - +1.3 3,653,284 - +0.3 3,653,288 - +2.3 3,653,294 + -1.3 3,653,294 + -0.1 3,653,295 - -0.5 3,653,296 + -0.1 3,653,300 + +0.2 3,653,300 + -0.2 3,653,301 - -0.0 3,653,301 - -0.4 3,653,306 + +0.4 3,653,307 - +0.5 3,653,307 - +0.5 3,653,307 - -0.1 3,653,307 - +1.5 3,653,312 + -0.4 3,653,312 + +0.3 3,653,423 - +1.2 3,653,426 + +0.4 3,653,427 - +1.2 3,653,427 - -0.3 3,653,454 + +0.9 3,653,454 + -1.4 3,653,530 + +0.2 3,653,530 + -0.0 3,653,603 + CA264_15630 0.18 -0.8 3,653,623 + CA264_15630 0.21 +1.4 3,653,623 + CA264_15630 0.21 +1.9 3,653,624 - CA264_15630 0.21 +0.2 3,653,657 + CA264_15630 0.26 -0.9 3,653,661 + CA264_15630 0.27 +0.1 3,653,662 - CA264_15630 0.27 +0.9 3,653,729 - CA264_15630 0.36 -0.5 3,653,729 - CA264_15630 0.36 +1.1 3,653,962 - CA264_15630 0.70 +0.5 3,654,097 - CA264_15630 0.89 -1.8 3,654,166 + +0.2 3,654,182 + -1.0 3,654,183 - -0.2 3,654,183 - -0.0 3,654,238 + +0.4 3,654,239 - +1.4 3,654,249 + -0.3 3,654,249 + +0.1 3,654,249 + -0.1 3,654,250 - +0.1 3,654,250 - -0.8 3,654,250 - -0.9 3,654,275 + -1.1 3,654,276 - -1.1 3,654,349 - -1.0 3,654,491 + CA264_15635 0.19 -1.0 3,654,569 + CA264_15635 0.26 +2.1 3,654,570 - CA264_15635 0.26 -0.8 3,654,603 + CA264_15635 0.29 +0.3 3,654,604 - CA264_15635 0.29 -0.8 3,654,604 - CA264_15635 0.29 +0.0 3,654,622 + CA264_15635 0.30 -0.0 3,654,623 - CA264_15635 0.30 -1.0 3,654,624 + CA264_15635 0.31 +0.7 3,654,624 + CA264_15635 0.31 -0.3 3,654,624 + CA264_15635 0.31 -1.6 3,654,624 + CA264_15635 0.31 +0.1 3,654,625 - CA264_15635 0.31 -0.8 3,654,625 - CA264_15635 0.31 -0.5 3,654,625 - CA264_15635 0.31 +0.1 3,654,625 - CA264_15635 0.31 -0.1 3,654,625 - CA264_15635 0.31 -2.5 3,654,625 - CA264_15635 0.31 -1.6 3,654,701 + CA264_15635 0.37 -0.8 3,654,701 + CA264_15635 0.37 +0.3 3,654,701 + CA264_15635 0.37 +0.6 3,654,702 - CA264_15635 0.37 -2.5 3,654,744 - CA264_15635 0.41 -2.3 3,654,763 - CA264_15635 0.42 +0.1 3,654,783 + CA264_15635 0.44 +0.6 3,654,835 - CA264_15635 0.48 -0.3 3,654,860 + CA264_15635 0.51 -1.1 3,654,860 + CA264_15635 0.51 -0.1 3,654,861 - CA264_15635 0.51 -1.0 3,654,927 - CA264_15635 0.56 +0.1 3,654,927 - CA264_15635 0.56 +0.9
Or see this region's nucleotide sequence