Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14435 and CA264_14440 are separated by 78 nucleotides CA264_14440 and CA264_14445 overlap by 11 nucleotides
CA264_14435: CA264_14435 - hypothetical protein, at 3,386,825 to 3,387,487
_14435
CA264_14440: CA264_14440 - glutamine cyclotransferase, at 3,387,566 to 3,388,576
_14440
CA264_14445: CA264_14445 - cysteine--tRNA ligase, at 3,388,566 to 3,390,062
_14445
Position (kb)
3387
3388
3389 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3386.566 kb on + strand at 3386.566 kb on + strand at 3386.573 kb on + strand at 3386.573 kb on + strand at 3386.614 kb on - strand at 3386.669 kb on + strand at 3386.670 kb on - strand at 3386.672 kb on - strand at 3386.678 kb on + strand at 3386.678 kb on + strand at 3386.678 kb on + strand at 3386.678 kb on + strand at 3386.678 kb on + strand at 3386.678 kb on + strand at 3386.679 kb on - strand at 3386.679 kb on - strand at 3386.681 kb on + strand at 3386.682 kb on - strand at 3386.682 kb on - strand at 3386.704 kb on + strand at 3386.830 kb on + strand at 3386.885 kb on - strand at 3386.885 kb on - strand at 3386.886 kb on + strand at 3386.886 kb on + strand at 3386.886 kb on + strand at 3386.886 kb on + strand at 3386.887 kb on - strand at 3386.887 kb on - strand at 3386.917 kb on + strand, within CA264_14435 at 3386.967 kb on - strand, within CA264_14435 at 3386.967 kb on - strand, within CA264_14435 at 3386.971 kb on + strand, within CA264_14435 at 3386.983 kb on - strand, within CA264_14435 at 3387.003 kb on + strand, within CA264_14435 at 3387.004 kb on - strand, within CA264_14435 at 3387.004 kb on - strand, within CA264_14435 at 3387.004 kb on - strand, within CA264_14435 at 3387.077 kb on - strand, within CA264_14435 at 3387.077 kb on - strand, within CA264_14435 at 3387.077 kb on - strand, within CA264_14435 at 3387.077 kb on - strand, within CA264_14435 at 3387.078 kb on + strand, within CA264_14435 at 3387.155 kb on + strand, within CA264_14435 at 3387.221 kb on + strand, within CA264_14435 at 3387.272 kb on + strand, within CA264_14435 at 3387.273 kb on - strand, within CA264_14435 at 3387.276 kb on - strand, within CA264_14435 at 3387.276 kb on - strand, within CA264_14435 at 3387.281 kb on + strand, within CA264_14435 at 3387.281 kb on + strand, within CA264_14435 at 3387.281 kb on + strand, within CA264_14435 at 3387.282 kb on - strand, within CA264_14435 at 3387.299 kb on + strand, within CA264_14435 at 3387.311 kb on + strand, within CA264_14435 at 3387.311 kb on + strand, within CA264_14435 at 3387.315 kb on - strand, within CA264_14435 at 3387.332 kb on + strand, within CA264_14435 at 3387.332 kb on + strand, within CA264_14435 at 3387.353 kb on + strand, within CA264_14435 at 3387.354 kb on - strand, within CA264_14435 at 3387.402 kb on - strand, within CA264_14435 at 3387.402 kb on - strand, within CA264_14435 at 3387.475 kb on + strand at 3387.477 kb on + strand at 3387.477 kb on + strand at 3387.477 kb on + strand at 3387.502 kb on - strand at 3387.532 kb on + strand at 3387.532 kb on + strand at 3387.630 kb on - strand at 3387.770 kb on + strand, within CA264_14440 at 3387.770 kb on + strand, within CA264_14440 at 3387.771 kb on - strand, within CA264_14440 at 3387.771 kb on - strand, within CA264_14440 at 3387.774 kb on + strand, within CA264_14440 at 3387.784 kb on - strand, within CA264_14440 at 3387.793 kb on - strand, within CA264_14440 at 3387.824 kb on - strand, within CA264_14440 at 3387.824 kb on - strand, within CA264_14440 at 3387.912 kb on + strand, within CA264_14440 at 3387.954 kb on + strand, within CA264_14440 at 3387.987 kb on + strand, within CA264_14440 at 3387.987 kb on + strand, within CA264_14440 at 3388.018 kb on - strand, within CA264_14440 at 3388.040 kb on - strand, within CA264_14440 at 3388.233 kb on + strand, within CA264_14440 at 3388.233 kb on + strand, within CA264_14440 at 3388.234 kb on - strand, within CA264_14440 at 3388.275 kb on + strand, within CA264_14440 at 3388.432 kb on + strand, within CA264_14440
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,386,566 + +1.0 3,386,566 + +0.5 3,386,573 + -0.8 3,386,573 + -0.3 3,386,614 - +0.1 3,386,669 + -1.6 3,386,670 - +0.4 3,386,672 - +0.2 3,386,678 + -0.7 3,386,678 + -1.5 3,386,678 + +0.1 3,386,678 + -1.7 3,386,678 + +0.4 3,386,678 + -0.4 3,386,679 - -0.1 3,386,679 - -1.8 3,386,681 + +0.1 3,386,682 - -0.6 3,386,682 - -0.5 3,386,704 + -0.5 3,386,830 + -0.6 3,386,885 - -0.2 3,386,885 - -1.0 3,386,886 + -2.1 3,386,886 + -0.1 3,386,886 + +0.1 3,386,886 + +0.1 3,386,887 - +1.2 3,386,887 - -0.5 3,386,917 + CA264_14435 0.14 -1.0 3,386,967 - CA264_14435 0.21 -1.2 3,386,967 - CA264_14435 0.21 -1.4 3,386,971 + CA264_14435 0.22 +0.7 3,386,983 - CA264_14435 0.24 +0.3 3,387,003 + CA264_14435 0.27 +0.6 3,387,004 - CA264_14435 0.27 -0.1 3,387,004 - CA264_14435 0.27 -0.8 3,387,004 - CA264_14435 0.27 -0.1 3,387,077 - CA264_14435 0.38 -0.2 3,387,077 - CA264_14435 0.38 -0.5 3,387,077 - CA264_14435 0.38 -0.1 3,387,077 - CA264_14435 0.38 -0.3 3,387,078 + CA264_14435 0.38 +1.6 3,387,155 + CA264_14435 0.50 -2.2 3,387,221 + CA264_14435 0.60 -0.5 3,387,272 + CA264_14435 0.67 -0.9 3,387,273 - CA264_14435 0.68 -0.4 3,387,276 - CA264_14435 0.68 -1.1 3,387,276 - CA264_14435 0.68 -0.6 3,387,281 + CA264_14435 0.69 -1.5 3,387,281 + CA264_14435 0.69 +0.1 3,387,281 + CA264_14435 0.69 -0.0 3,387,282 - CA264_14435 0.69 -0.2 3,387,299 + CA264_14435 0.71 -0.7 3,387,311 + CA264_14435 0.73 -0.8 3,387,311 + CA264_14435 0.73 -0.2 3,387,315 - CA264_14435 0.74 -0.1 3,387,332 + CA264_14435 0.76 -1.4 3,387,332 + CA264_14435 0.76 -0.9 3,387,353 + CA264_14435 0.80 -0.7 3,387,354 - CA264_14435 0.80 +1.1 3,387,402 - CA264_14435 0.87 -1.1 3,387,402 - CA264_14435 0.87 -0.7 3,387,475 + -0.1 3,387,477 + +0.4 3,387,477 + -1.0 3,387,477 + -0.8 3,387,502 - +0.7 3,387,532 + -0.7 3,387,532 + -0.9 3,387,630 - -0.5 3,387,770 + CA264_14440 0.20 -0.2 3,387,770 + CA264_14440 0.20 -0.1 3,387,771 - CA264_14440 0.20 -1.8 3,387,771 - CA264_14440 0.20 -1.3 3,387,774 + CA264_14440 0.21 -0.1 3,387,784 - CA264_14440 0.22 -1.2 3,387,793 - CA264_14440 0.22 -0.5 3,387,824 - CA264_14440 0.26 +1.0 3,387,824 - CA264_14440 0.26 -0.3 3,387,912 + CA264_14440 0.34 -1.4 3,387,954 + CA264_14440 0.38 -0.6 3,387,987 + CA264_14440 0.42 -1.1 3,387,987 + CA264_14440 0.42 -1.5 3,388,018 - CA264_14440 0.45 +1.6 3,388,040 - CA264_14440 0.47 -1.0 3,388,233 + CA264_14440 0.66 +2.2 3,388,233 + CA264_14440 0.66 -0.2 3,388,234 - CA264_14440 0.66 -1.5 3,388,275 + CA264_14440 0.70 -2.5 3,388,432 + CA264_14440 0.86 -0.5
Or see this region's nucleotide sequence