Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14365 and CA264_14370 are separated by 104 nucleotides CA264_14370 and CA264_14375 are separated by 372 nucleotides
CA264_14365: CA264_14365 - radical SAM protein, at 3,372,735 to 3,373,733
_14365
CA264_14370: CA264_14370 - hypothetical protein, at 3,373,838 to 3,374,257
_14370
CA264_14375: CA264_14375 - hypothetical protein, at 3,374,630 to 3,375,238
_14375
Position (kb)
3373
3374
3375 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3372.841 kb on - strand at 3372.862 kb on + strand, within CA264_14365 at 3372.876 kb on - strand, within CA264_14365 at 3372.876 kb on - strand, within CA264_14365 at 3372.941 kb on - strand, within CA264_14365 at 3372.950 kb on - strand, within CA264_14365 at 3372.970 kb on + strand, within CA264_14365 at 3373.025 kb on + strand, within CA264_14365 at 3373.115 kb on - strand at 3373.116 kb on + strand, within CA264_14365 at 3373.117 kb on - strand, within CA264_14365 at 3373.186 kb on - strand, within CA264_14365 at 3373.212 kb on + strand, within CA264_14365 at 3373.563 kb on - strand, within CA264_14365 at 3373.633 kb on + strand, within CA264_14365 at 3373.653 kb on + strand at 3373.653 kb on + strand at 3373.654 kb on - strand at 3373.688 kb on - strand at 3373.688 kb on - strand at 3373.688 kb on - strand at 3373.711 kb on - strand at 3373.759 kb on + strand at 3373.767 kb on - strand at 3373.837 kb on + strand at 3373.889 kb on + strand, within CA264_14370 at 3373.980 kb on - strand, within CA264_14370 at 3373.991 kb on - strand, within CA264_14370 at 3373.994 kb on + strand, within CA264_14370 at 3373.994 kb on + strand, within CA264_14370 at 3374.043 kb on + strand, within CA264_14370 at 3374.069 kb on + strand, within CA264_14370 at 3374.069 kb on + strand, within CA264_14370 at 3374.069 kb on + strand, within CA264_14370 at 3374.133 kb on + strand, within CA264_14370 at 3374.134 kb on - strand, within CA264_14370 at 3374.134 kb on - strand, within CA264_14370 at 3374.197 kb on - strand, within CA264_14370 at 3374.268 kb on - strand at 3374.346 kb on - strand at 3374.368 kb on - strand at 3374.368 kb on - strand at 3374.430 kb on - strand at 3374.485 kb on - strand at 3374.488 kb on + strand at 3374.489 kb on - strand at 3374.512 kb on + strand at 3374.512 kb on + strand at 3374.516 kb on + strand at 3374.517 kb on - strand at 3374.517 kb on - strand at 3374.517 kb on - strand at 3374.518 kb on + strand at 3374.521 kb on + strand at 3374.525 kb on + strand at 3374.525 kb on + strand at 3374.574 kb on - strand at 3374.617 kb on + strand at 3374.617 kb on + strand at 3374.623 kb on + strand at 3374.623 kb on + strand at 3374.624 kb on - strand at 3374.710 kb on - strand, within CA264_14375 at 3374.830 kb on - strand, within CA264_14375 at 3374.889 kb on + strand, within CA264_14375 at 3374.922 kb on + strand, within CA264_14375 at 3374.922 kb on + strand, within CA264_14375 at 3374.923 kb on - strand, within CA264_14375 at 3374.938 kb on + strand, within CA264_14375 at 3374.959 kb on - strand, within CA264_14375 at 3374.995 kb on - strand, within CA264_14375 at 3375.051 kb on + strand, within CA264_14375 at 3375.084 kb on - strand, within CA264_14375 at 3375.102 kb on + strand, within CA264_14375 at 3375.103 kb on - strand, within CA264_14375 at 3375.155 kb on + strand, within CA264_14375 at 3375.156 kb on - strand, within CA264_14375
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,372,841 - +0.7 3,372,862 + CA264_14365 0.13 -0.7 3,372,876 - CA264_14365 0.14 -0.3 3,372,876 - CA264_14365 0.14 +0.6 3,372,941 - CA264_14365 0.21 -0.0 3,372,950 - CA264_14365 0.22 -2.0 3,372,970 + CA264_14365 0.24 -0.4 3,373,025 + CA264_14365 0.29 -1.8 3,373,115 - +0.4 3,373,116 + CA264_14365 0.38 +0.7 3,373,117 - CA264_14365 0.38 -1.3 3,373,186 - CA264_14365 0.45 -1.6 3,373,212 + CA264_14365 0.48 -1.0 3,373,563 - CA264_14365 0.83 +0.2 3,373,633 + CA264_14365 0.90 -1.4 3,373,653 + -0.7 3,373,653 + +0.6 3,373,654 - +0.1 3,373,688 - -0.5 3,373,688 - -0.3 3,373,688 - +0.0 3,373,711 - +0.0 3,373,759 + +0.7 3,373,767 - -0.8 3,373,837 + -0.3 3,373,889 + CA264_14370 0.12 -0.1 3,373,980 - CA264_14370 0.34 -0.4 3,373,991 - CA264_14370 0.36 -0.4 3,373,994 + CA264_14370 0.37 -1.5 3,373,994 + CA264_14370 0.37 -0.5 3,374,043 + CA264_14370 0.49 -0.4 3,374,069 + CA264_14370 0.55 -0.1 3,374,069 + CA264_14370 0.55 -0.7 3,374,069 + CA264_14370 0.55 +0.4 3,374,133 + CA264_14370 0.70 -0.5 3,374,134 - CA264_14370 0.70 +0.3 3,374,134 - CA264_14370 0.70 -0.7 3,374,197 - CA264_14370 0.85 -0.1 3,374,268 - +0.5 3,374,346 - -0.9 3,374,368 - +0.6 3,374,368 - +0.2 3,374,430 - +0.5 3,374,485 - +0.6 3,374,488 + -1.1 3,374,489 - -0.6 3,374,512 + -0.0 3,374,512 + +0.0 3,374,516 + +0.2 3,374,517 - -0.3 3,374,517 - +0.2 3,374,517 - -0.6 3,374,518 + -0.4 3,374,521 + +1.3 3,374,525 + -1.0 3,374,525 + -0.0 3,374,574 - -0.6 3,374,617 + +0.4 3,374,617 + +0.9 3,374,623 + -1.1 3,374,623 + +0.1 3,374,624 - +0.5 3,374,710 - CA264_14375 0.13 +0.0 3,374,830 - CA264_14375 0.33 +0.7 3,374,889 + CA264_14375 0.43 -1.3 3,374,922 + CA264_14375 0.48 -0.6 3,374,922 + CA264_14375 0.48 -0.8 3,374,923 - CA264_14375 0.48 +0.4 3,374,938 + CA264_14375 0.51 -0.3 3,374,959 - CA264_14375 0.54 +0.7 3,374,995 - CA264_14375 0.60 -0.3 3,375,051 + CA264_14375 0.69 -0.1 3,375,084 - CA264_14375 0.75 +0.8 3,375,102 + CA264_14375 0.78 -0.4 3,375,103 - CA264_14375 0.78 +0.0 3,375,155 + CA264_14375 0.86 -3.0 3,375,156 - CA264_14375 0.86 +0.3
Or see this region's nucleotide sequence