Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13200 and CA264_13205 are separated by 74 nucleotides CA264_13205 and CA264_13210 are separated by 255 nucleotides CA264_13210 and CA264_13215 are separated by 153 nucleotides
CA264_13200: CA264_13200 - lysine--tRNA ligase, at 3,078,439 to 3,079,983
_13200
CA264_13205: CA264_13205 - hypothetical protein, at 3,080,058 to 3,080,507
_13205
CA264_13210: CA264_13210 - hypothetical protein, at 3,080,763 to 3,081,101
_13210
CA264_13215: CA264_13215 - hypothetical protein, at 3,081,255 to 3,081,674
_13215
Position (kb)
3080
3081 Strain fitness (log2 ratio)
-1
0
1
2 at 3080.059 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.084 kb on + strand at 3080.085 kb on - strand at 3080.100 kb on - strand at 3080.227 kb on - strand, within CA264_13205 at 3080.276 kb on + strand, within CA264_13205 at 3080.364 kb on + strand, within CA264_13205 at 3080.382 kb on + strand, within CA264_13205 at 3080.422 kb on + strand, within CA264_13205 at 3080.423 kb on - strand, within CA264_13205 at 3080.443 kb on - strand, within CA264_13205 at 3080.508 kb on - strand at 3080.519 kb on + strand at 3080.540 kb on - strand at 3080.587 kb on - strand at 3080.587 kb on - strand at 3080.607 kb on - strand at 3080.798 kb on + strand, within CA264_13210 at 3080.799 kb on - strand, within CA264_13210 at 3080.964 kb on - strand, within CA264_13210 at 3080.973 kb on - strand, within CA264_13210 at 3081.015 kb on - strand, within CA264_13210 at 3081.079 kb on - strand at 3081.090 kb on - strand at 3081.137 kb on + strand at 3081.138 kb on - strand at 3081.157 kb on - strand at 3081.169 kb on - strand at 3081.169 kb on - strand at 3081.173 kb on + strand at 3081.174 kb on - strand at 3081.176 kb on - strand at 3081.179 kb on + strand at 3081.180 kb on - strand at 3081.180 kb on - strand at 3081.181 kb on + strand at 3081.182 kb on - strand at 3081.189 kb on - strand at 3081.207 kb on - strand at 3081.217 kb on + strand at 3081.331 kb on + strand, within CA264_13215 at 3081.332 kb on - strand, within CA264_13215 at 3081.332 kb on - strand, within CA264_13215 at 3081.358 kb on + strand, within CA264_13215 at 3081.364 kb on - strand, within CA264_13215 at 3081.388 kb on + strand, within CA264_13215 at 3081.388 kb on + strand, within CA264_13215
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,080,059 + +0.3 3,080,084 + -0.8 3,080,084 + +1.5 3,080,084 + +0.6 3,080,085 - +0.6 3,080,100 - -0.4 3,080,227 - CA264_13205 0.38 -1.0 3,080,276 + CA264_13205 0.48 +1.0 3,080,364 + CA264_13205 0.68 -1.0 3,080,382 + CA264_13205 0.72 -1.5 3,080,422 + CA264_13205 0.81 +1.1 3,080,423 - CA264_13205 0.81 -1.5 3,080,443 - CA264_13205 0.86 -0.2 3,080,508 - +1.3 3,080,519 + +0.4 3,080,540 - +0.2 3,080,587 - -0.8 3,080,587 - -0.4 3,080,607 - -0.3 3,080,798 + CA264_13210 0.10 +0.5 3,080,799 - CA264_13210 0.11 +0.2 3,080,964 - CA264_13210 0.59 -1.3 3,080,973 - CA264_13210 0.62 +0.5 3,081,015 - CA264_13210 0.74 -0.5 3,081,079 - -0.8 3,081,090 - -0.1 3,081,137 + +0.4 3,081,138 - +0.8 3,081,157 - +0.2 3,081,169 - -0.8 3,081,169 - -0.9 3,081,173 + +0.7 3,081,174 - -0.3 3,081,176 - -1.0 3,081,179 + +0.4 3,081,180 - -0.4 3,081,180 - -0.7 3,081,181 + +0.4 3,081,182 - -0.4 3,081,189 - -0.4 3,081,207 - +0.8 3,081,217 + +2.2 3,081,331 + CA264_13215 0.18 +0.2 3,081,332 - CA264_13215 0.18 +0.3 3,081,332 - CA264_13215 0.18 -0.3 3,081,358 + CA264_13215 0.25 -0.1 3,081,364 - CA264_13215 0.26 -1.2 3,081,388 + CA264_13215 0.32 -1.2 3,081,388 + CA264_13215 0.32 +0.6
Or see this region's nucleotide sequence