Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13190 and CA264_13195 are separated by 413 nucleotides CA264_13195 and CA264_13200 are separated by 268 nucleotides
CA264_13190: CA264_13190 - hypothetical protein, at 3,073,243 to 3,076,728
_13190
CA264_13195: CA264_13195 - hypothetical protein, at 3,077,142 to 3,078,170
_13195
CA264_13200: CA264_13200 - lysine--tRNA ligase, at 3,078,439 to 3,079,983
_13200
Position (kb)
3077
3078
3079 Strain fitness (log2 ratio)
-2
-1
0
1 at 3076.150 kb on - strand, within CA264_13190 at 3076.175 kb on + strand, within CA264_13190 at 3076.180 kb on + strand, within CA264_13190 at 3076.181 kb on - strand, within CA264_13190 at 3076.197 kb on + strand, within CA264_13190 at 3076.198 kb on - strand, within CA264_13190 at 3076.198 kb on - strand, within CA264_13190 at 3076.198 kb on - strand, within CA264_13190 at 3076.303 kb on - strand, within CA264_13190 at 3076.347 kb on + strand, within CA264_13190 at 3076.363 kb on - strand, within CA264_13190 at 3076.380 kb on + strand at 3076.424 kb on + strand at 3076.425 kb on - strand at 3076.425 kb on - strand at 3076.425 kb on - strand at 3076.425 kb on - strand at 3076.429 kb on + strand at 3076.430 kb on - strand at 3076.496 kb on + strand at 3076.499 kb on - strand at 3076.503 kb on + strand at 3076.504 kb on - strand at 3076.604 kb on - strand at 3076.604 kb on - strand at 3076.640 kb on + strand at 3076.640 kb on + strand at 3076.722 kb on + strand at 3076.789 kb on - strand at 3076.794 kb on + strand at 3076.794 kb on + strand at 3076.794 kb on + strand at 3076.795 kb on - strand at 3076.817 kb on - strand at 3076.864 kb on - strand at 3076.877 kb on - strand at 3076.878 kb on + strand at 3076.878 kb on + strand at 3076.879 kb on - strand at 3076.880 kb on + strand at 3076.880 kb on + strand at 3076.893 kb on - strand at 3076.933 kb on + strand at 3077.141 kb on + strand at 3077.248 kb on - strand, within CA264_13195 at 3077.272 kb on + strand, within CA264_13195 at 3077.272 kb on + strand, within CA264_13195 at 3077.273 kb on - strand, within CA264_13195 at 3077.279 kb on + strand, within CA264_13195 at 3077.279 kb on + strand, within CA264_13195 at 3077.359 kb on + strand, within CA264_13195 at 3077.434 kb on - strand, within CA264_13195 at 3077.472 kb on + strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.473 kb on - strand, within CA264_13195 at 3077.475 kb on + strand, within CA264_13195 at 3077.476 kb on - strand, within CA264_13195 at 3077.583 kb on + strand, within CA264_13195 at 3077.584 kb on - strand, within CA264_13195 at 3077.620 kb on - strand, within CA264_13195 at 3077.658 kb on + strand, within CA264_13195 at 3077.659 kb on - strand, within CA264_13195 at 3077.816 kb on - strand, within CA264_13195 at 3077.868 kb on - strand, within CA264_13195 at 3077.871 kb on - strand, within CA264_13195 at 3077.939 kb on - strand, within CA264_13195 at 3077.958 kb on - strand, within CA264_13195 at 3077.995 kb on - strand, within CA264_13195 at 3078.018 kb on + strand, within CA264_13195 at 3078.019 kb on - strand, within CA264_13195 at 3078.103 kb on + strand at 3078.103 kb on + strand at 3078.123 kb on - strand at 3078.169 kb on - strand at 3078.253 kb on + strand at 3078.253 kb on + strand at 3078.270 kb on - strand at 3078.274 kb on + strand at 3078.386 kb on + strand at 3078.410 kb on - strand at 3078.447 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,076,150 - CA264_13190 0.83 -0.2 3,076,175 + CA264_13190 0.84 -0.4 3,076,180 + CA264_13190 0.84 -0.2 3,076,181 - CA264_13190 0.84 -0.2 3,076,197 + CA264_13190 0.85 -0.4 3,076,198 - CA264_13190 0.85 +0.0 3,076,198 - CA264_13190 0.85 -0.8 3,076,198 - CA264_13190 0.85 -0.3 3,076,303 - CA264_13190 0.88 -1.5 3,076,347 + CA264_13190 0.89 -1.2 3,076,363 - CA264_13190 0.90 -0.1 3,076,380 + -0.6 3,076,424 + +0.4 3,076,425 - -0.4 3,076,425 - +1.1 3,076,425 - +0.4 3,076,425 - -0.4 3,076,429 + +0.1 3,076,430 - -1.8 3,076,496 + +0.3 3,076,499 - +1.0 3,076,503 + +0.5 3,076,504 - -1.9 3,076,604 - +0.3 3,076,604 - -1.5 3,076,640 + -0.8 3,076,640 + -1.5 3,076,722 + -0.5 3,076,789 - -1.4 3,076,794 + -0.7 3,076,794 + -1.2 3,076,794 + -2.2 3,076,795 - +0.2 3,076,817 - -0.7 3,076,864 - -0.4 3,076,877 - +0.5 3,076,878 + -1.2 3,076,878 + -0.4 3,076,879 - +0.4 3,076,880 + -0.4 3,076,880 + -0.2 3,076,893 - -0.5 3,076,933 + -0.6 3,077,141 + -1.1 3,077,248 - CA264_13195 0.10 -0.2 3,077,272 + CA264_13195 0.13 -0.1 3,077,272 + CA264_13195 0.13 +0.9 3,077,273 - CA264_13195 0.13 -2.1 3,077,279 + CA264_13195 0.13 -1.0 3,077,279 + CA264_13195 0.13 -0.9 3,077,359 + CA264_13195 0.21 -1.0 3,077,434 - CA264_13195 0.28 +0.2 3,077,472 + CA264_13195 0.32 -0.8 3,077,473 - CA264_13195 0.32 -0.4 3,077,473 - CA264_13195 0.32 -0.8 3,077,473 - CA264_13195 0.32 -0.6 3,077,475 + CA264_13195 0.32 -2.3 3,077,476 - CA264_13195 0.32 +0.9 3,077,583 + CA264_13195 0.43 -0.8 3,077,584 - CA264_13195 0.43 -0.2 3,077,620 - CA264_13195 0.46 +0.5 3,077,658 + CA264_13195 0.50 -0.5 3,077,659 - CA264_13195 0.50 -0.4 3,077,816 - CA264_13195 0.66 -0.4 3,077,868 - CA264_13195 0.71 -1.1 3,077,871 - CA264_13195 0.71 +0.3 3,077,939 - CA264_13195 0.77 -0.4 3,077,958 - CA264_13195 0.79 -0.3 3,077,995 - CA264_13195 0.83 +1.3 3,078,018 + CA264_13195 0.85 -1.1 3,078,019 - CA264_13195 0.85 -0.4 3,078,103 + +0.2 3,078,103 + -0.1 3,078,123 - -0.8 3,078,169 - -0.4 3,078,253 + -0.2 3,078,253 + +0.1 3,078,270 - -0.3 3,078,274 + -1.4 3,078,386 + -1.4 3,078,410 - -0.4 3,078,447 - +1.2
Or see this region's nucleotide sequence