Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13090 and CA264_13095 are separated by 171 nucleotides CA264_13095 and CA264_13100 are separated by 943 nucleotides
CA264_13090: CA264_13090 - peptidase M42, at 3,052,605 to 3,053,675
_13090
CA264_13095: CA264_13095 - cobalamin-binding protein, at 3,053,847 to 3,054,620
_13095
CA264_13100: CA264_13100 - 3-phosphoshikimate 1-carboxyvinyltransferase, at 3,055,564 to 3,056,796
_13100
Position (kb)
3053
3054
3055 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3053.042 kb on - strand, within CA264_13090 at 3053.042 kb on - strand, within CA264_13090 at 3053.071 kb on + strand, within CA264_13090 at 3053.112 kb on + strand, within CA264_13090 at 3053.112 kb on + strand, within CA264_13090 at 3053.112 kb on + strand, within CA264_13090 at 3053.115 kb on + strand, within CA264_13090 at 3053.115 kb on + strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.116 kb on - strand, within CA264_13090 at 3053.214 kb on + strand, within CA264_13090 at 3053.215 kb on - strand, within CA264_13090 at 3053.215 kb on - strand, within CA264_13090 at 3053.222 kb on - strand, within CA264_13090 at 3053.308 kb on + strand, within CA264_13090 at 3053.560 kb on - strand, within CA264_13090 at 3053.699 kb on + strand at 3053.700 kb on - strand at 3053.805 kb on - strand at 3053.805 kb on - strand at 3053.805 kb on - strand at 3053.812 kb on - strand at 3053.827 kb on + strand at 3053.828 kb on - strand at 3053.828 kb on - strand at 3053.836 kb on - strand at 3053.896 kb on + strand at 3054.088 kb on - strand, within CA264_13095 at 3054.088 kb on - strand, within CA264_13095 at 3054.140 kb on + strand, within CA264_13095 at 3054.144 kb on + strand, within CA264_13095 at 3054.144 kb on + strand, within CA264_13095 at 3054.146 kb on + strand, within CA264_13095 at 3054.146 kb on + strand, within CA264_13095 at 3054.147 kb on - strand, within CA264_13095 at 3054.147 kb on - strand, within CA264_13095 at 3054.230 kb on + strand, within CA264_13095 at 3054.230 kb on + strand, within CA264_13095 at 3054.230 kb on + strand, within CA264_13095 at 3054.231 kb on - strand, within CA264_13095 at 3054.232 kb on + strand, within CA264_13095 at 3054.233 kb on - strand, within CA264_13095 at 3054.233 kb on - strand, within CA264_13095 at 3054.274 kb on + strand, within CA264_13095 at 3054.285 kb on + strand, within CA264_13095 at 3054.285 kb on + strand, within CA264_13095 at 3054.307 kb on - strand, within CA264_13095 at 3054.307 kb on - strand, within CA264_13095 at 3054.307 kb on - strand, within CA264_13095 at 3054.307 kb on - strand, within CA264_13095 at 3054.341 kb on + strand, within CA264_13095 at 3054.343 kb on + strand, within CA264_13095 at 3054.343 kb on + strand, within CA264_13095 at 3054.343 kb on + strand, within CA264_13095 at 3054.343 kb on + strand, within CA264_13095 at 3054.344 kb on - strand, within CA264_13095 at 3054.344 kb on - strand, within CA264_13095 at 3054.344 kb on - strand, within CA264_13095 at 3054.344 kb on - strand, within CA264_13095 at 3054.344 kb on - strand, within CA264_13095 at 3054.459 kb on + strand, within CA264_13095 at 3054.566 kb on - strand at 3054.618 kb on + strand at 3054.618 kb on + strand at 3054.618 kb on + strand at 3054.638 kb on + strand at 3054.638 kb on + strand at 3054.638 kb on + strand at 3054.639 kb on - strand at 3054.639 kb on - strand at 3054.692 kb on + strand at 3054.700 kb on + strand at 3054.719 kb on - strand at 3054.719 kb on - strand at 3054.721 kb on - strand at 3054.721 kb on - strand at 3054.749 kb on + strand at 3054.751 kb on + strand at 3054.811 kb on + strand at 3054.812 kb on - strand at 3054.823 kb on + strand at 3054.887 kb on + strand at 3054.888 kb on - strand at 3054.908 kb on - strand at 3054.922 kb on + strand at 3054.923 kb on - strand at 3054.931 kb on + strand at 3055.072 kb on + strand at 3055.155 kb on + strand at 3055.164 kb on + strand at 3055.164 kb on + strand at 3055.164 kb on + strand at 3055.165 kb on - strand at 3055.165 kb on - strand at 3055.189 kb on - strand at 3055.196 kb on - strand at 3055.206 kb on - strand at 3055.238 kb on + strand at 3055.238 kb on + strand at 3055.239 kb on - strand at 3055.294 kb on - strand at 3055.330 kb on - strand at 3055.330 kb on - strand at 3055.330 kb on - strand at 3055.335 kb on + strand at 3055.335 kb on + strand at 3055.336 kb on - strand at 3055.402 kb on - strand at 3055.413 kb on - strand at 3055.413 kb on - strand at 3055.414 kb on + strand at 3055.414 kb on + strand at 3055.415 kb on - strand at 3055.415 kb on - strand at 3055.415 kb on - strand at 3055.415 kb on - strand at 3055.415 kb on - strand at 3055.418 kb on + strand at 3055.435 kb on - strand at 3055.454 kb on - strand at 3055.456 kb on + strand at 3055.456 kb on + strand at 3055.457 kb on - strand at 3055.459 kb on - strand at 3055.459 kb on - strand at 3055.459 kb on - strand at 3055.459 kb on - strand at 3055.462 kb on - strand at 3055.566 kb on - strand at 3055.566 kb on - strand at 3055.578 kb on + strand at 3055.579 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 3,053,042 - CA264_13090 0.41 -1.2 3,053,042 - CA264_13090 0.41 -0.1 3,053,071 + CA264_13090 0.44 -0.6 3,053,112 + CA264_13090 0.47 -0.7 3,053,112 + CA264_13090 0.47 -0.9 3,053,112 + CA264_13090 0.47 +1.0 3,053,115 + CA264_13090 0.48 +0.0 3,053,115 + CA264_13090 0.48 -0.2 3,053,116 - CA264_13090 0.48 -0.2 3,053,116 - CA264_13090 0.48 -0.3 3,053,116 - CA264_13090 0.48 +1.6 3,053,116 - CA264_13090 0.48 +0.2 3,053,214 + CA264_13090 0.57 -0.1 3,053,215 - CA264_13090 0.57 +0.3 3,053,215 - CA264_13090 0.57 +0.7 3,053,222 - CA264_13090 0.58 -0.2 3,053,308 + CA264_13090 0.66 -0.8 3,053,560 - CA264_13090 0.89 -0.2 3,053,699 + +0.0 3,053,700 - +0.5 3,053,805 - +0.5 3,053,805 - -0.0 3,053,805 - +0.9 3,053,812 - -0.0 3,053,827 + -1.5 3,053,828 - -1.0 3,053,828 - -0.0 3,053,836 - +0.5 3,053,896 + -0.2 3,054,088 - CA264_13095 0.31 -0.2 3,054,088 - CA264_13095 0.31 -0.2 3,054,140 + CA264_13095 0.38 -0.0 3,054,144 + CA264_13095 0.38 -0.1 3,054,144 + CA264_13095 0.38 +0.7 3,054,146 + CA264_13095 0.39 +0.6 3,054,146 + CA264_13095 0.39 +0.4 3,054,147 - CA264_13095 0.39 -0.2 3,054,147 - CA264_13095 0.39 -0.1 3,054,230 + CA264_13095 0.49 -1.0 3,054,230 + CA264_13095 0.49 +0.1 3,054,230 + CA264_13095 0.49 +1.8 3,054,231 - CA264_13095 0.50 -0.0 3,054,232 + CA264_13095 0.50 +0.4 3,054,233 - CA264_13095 0.50 +0.5 3,054,233 - CA264_13095 0.50 +0.3 3,054,274 + CA264_13095 0.55 +0.2 3,054,285 + CA264_13095 0.57 -1.2 3,054,285 + CA264_13095 0.57 +0.6 3,054,307 - CA264_13095 0.59 -0.8 3,054,307 - CA264_13095 0.59 -0.6 3,054,307 - CA264_13095 0.59 -0.5 3,054,307 - CA264_13095 0.59 +0.5 3,054,341 + CA264_13095 0.64 +0.2 3,054,343 + CA264_13095 0.64 -0.2 3,054,343 + CA264_13095 0.64 +0.0 3,054,343 + CA264_13095 0.64 -0.4 3,054,343 + CA264_13095 0.64 -0.4 3,054,344 - CA264_13095 0.64 +0.0 3,054,344 - CA264_13095 0.64 -0.3 3,054,344 - CA264_13095 0.64 -0.2 3,054,344 - CA264_13095 0.64 +0.3 3,054,344 - CA264_13095 0.64 -0.2 3,054,459 + CA264_13095 0.79 -0.0 3,054,566 - +1.0 3,054,618 + -0.9 3,054,618 + +1.5 3,054,618 + -0.4 3,054,638 + +1.2 3,054,638 + -1.1 3,054,638 + -0.5 3,054,639 - +0.4 3,054,639 - +0.1 3,054,692 + -0.3 3,054,700 + -0.0 3,054,719 - +0.2 3,054,719 - -0.0 3,054,721 - -0.5 3,054,721 - +0.0 3,054,749 + -0.6 3,054,751 + +0.2 3,054,811 + -1.0 3,054,812 - +0.6 3,054,823 + -0.9 3,054,887 + +0.0 3,054,888 - -0.1 3,054,908 - -1.3 3,054,922 + +0.1 3,054,923 - -0.5 3,054,931 + -0.0 3,055,072 + -0.4 3,055,155 + +1.0 3,055,164 + -0.2 3,055,164 + +0.7 3,055,164 + +0.1 3,055,165 - +0.0 3,055,165 - -2.0 3,055,189 - -0.6 3,055,196 - +0.7 3,055,206 - -0.2 3,055,238 + +1.1 3,055,238 + -1.1 3,055,239 - -0.3 3,055,294 - -0.1 3,055,330 - -0.1 3,055,330 - +0.8 3,055,330 - +1.1 3,055,335 + -0.2 3,055,335 + +1.1 3,055,336 - +0.0 3,055,402 - +0.2 3,055,413 - -0.2 3,055,413 - +0.3 3,055,414 + -1.9 3,055,414 + -0.7 3,055,415 - +0.8 3,055,415 - +0.8 3,055,415 - +0.4 3,055,415 - +0.6 3,055,415 - -0.8 3,055,418 + -1.4 3,055,435 - -0.3 3,055,454 - +0.4 3,055,456 + -1.9 3,055,456 + +0.5 3,055,457 - +0.3 3,055,459 - +0.1 3,055,459 - +0.8 3,055,459 - +0.6 3,055,459 - -0.4 3,055,462 - +0.6 3,055,566 - +0.7 3,055,566 - -0.1 3,055,578 + -1.1 3,055,579 - +0.1
Or see this region's nucleotide sequence