Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_10975 and CA264_10980 are separated by 54 nucleotides CA264_10980 and CA264_10985 are separated by 79 nucleotides CA264_10985 and CA264_10990 are separated by 74 nucleotides
CA264_10975: CA264_10975 - Pathogenesis-related transcriptional factor and ERF protein, at 2,531,543 to 2,532,112
_10975
CA264_10980: CA264_10980 - peptidase M23, at 2,532,167 to 2,532,883
_10980
CA264_10985: CA264_10985 - mechanosensitive ion channel protein MscS, at 2,532,963 to 2,533,805
_10985
CA264_10990: CA264_10990 - ABC transporter permease, at 2,533,880 to 2,535,088
_10990
Position (kb)
2532
2533
2534 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2531.997 kb on + strand, within CA264_10975 at 2532.018 kb on - strand, within CA264_10975 at 2532.166 kb on + strand at 2532.166 kb on + strand at 2532.167 kb on - strand at 2532.568 kb on + strand, within CA264_10980 at 2532.602 kb on + strand, within CA264_10980 at 2532.603 kb on - strand, within CA264_10980 at 2532.611 kb on + strand, within CA264_10980 at 2532.612 kb on - strand, within CA264_10980 at 2532.742 kb on + strand, within CA264_10980 at 2532.744 kb on + strand, within CA264_10980 at 2532.744 kb on + strand, within CA264_10980 at 2532.809 kb on + strand, within CA264_10980 at 2532.809 kb on + strand, within CA264_10980 at 2532.810 kb on - strand, within CA264_10980 at 2532.881 kb on + strand at 2532.951 kb on + strand at 2532.957 kb on - strand at 2533.015 kb on - strand at 2533.015 kb on - strand at 2533.079 kb on - strand, within CA264_10985 at 2533.079 kb on - strand, within CA264_10985 at 2533.091 kb on - strand, within CA264_10985 at 2533.153 kb on + strand, within CA264_10985 at 2533.160 kb on + strand, within CA264_10985 at 2533.160 kb on + strand, within CA264_10985 at 2533.226 kb on - strand, within CA264_10985 at 2533.415 kb on + strand, within CA264_10985 at 2533.467 kb on + strand, within CA264_10985 at 2533.506 kb on - strand, within CA264_10985 at 2533.537 kb on + strand, within CA264_10985 at 2533.537 kb on + strand, within CA264_10985 at 2533.547 kb on + strand, within CA264_10985 at 2533.548 kb on - strand, within CA264_10985 at 2533.548 kb on - strand, within CA264_10985 at 2533.548 kb on - strand, within CA264_10985 at 2533.549 kb on + strand, within CA264_10985 at 2533.549 kb on + strand, within CA264_10985 at 2533.549 kb on + strand, within CA264_10985 at 2533.550 kb on - strand, within CA264_10985 at 2533.550 kb on - strand, within CA264_10985 at 2533.582 kb on + strand, within CA264_10985 at 2533.634 kb on + strand, within CA264_10985 at 2533.803 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,531,997 + CA264_10975 0.80 -2.2 2,532,018 - CA264_10975 0.83 -2.9 2,532,166 + -1.8 2,532,166 + -1.0 2,532,167 - +0.0 2,532,568 + CA264_10980 0.56 +0.3 2,532,602 + CA264_10980 0.61 -0.4 2,532,603 - CA264_10980 0.61 -1.0 2,532,611 + CA264_10980 0.62 -1.3 2,532,612 - CA264_10980 0.62 -2.3 2,532,742 + CA264_10980 0.80 +0.3 2,532,744 + CA264_10980 0.80 +1.1 2,532,744 + CA264_10980 0.80 -0.6 2,532,809 + CA264_10980 0.90 -0.9 2,532,809 + CA264_10980 0.90 -2.1 2,532,810 - CA264_10980 0.90 -2.6 2,532,881 + -1.2 2,532,951 + -0.2 2,532,957 - -0.8 2,533,015 - -1.7 2,533,015 - -2.3 2,533,079 - CA264_10985 0.14 -2.4 2,533,079 - CA264_10985 0.14 -1.7 2,533,091 - CA264_10985 0.15 -2.9 2,533,153 + CA264_10985 0.23 -0.7 2,533,160 + CA264_10985 0.23 -0.5 2,533,160 + CA264_10985 0.23 -1.4 2,533,226 - CA264_10985 0.31 -0.5 2,533,415 + CA264_10985 0.54 -2.1 2,533,467 + CA264_10985 0.60 +0.5 2,533,506 - CA264_10985 0.64 -1.1 2,533,537 + CA264_10985 0.68 -0.5 2,533,537 + CA264_10985 0.68 +0.1 2,533,547 + CA264_10985 0.69 -1.6 2,533,548 - CA264_10985 0.69 +0.4 2,533,548 - CA264_10985 0.69 -1.3 2,533,548 - CA264_10985 0.69 -0.6 2,533,549 + CA264_10985 0.70 -0.5 2,533,549 + CA264_10985 0.70 -0.3 2,533,549 + CA264_10985 0.70 +0.8 2,533,550 - CA264_10985 0.70 -0.8 2,533,550 - CA264_10985 0.70 -2.6 2,533,582 + CA264_10985 0.73 -1.8 2,533,634 + CA264_10985 0.80 -1.2 2,533,803 + +0.8
Or see this region's nucleotide sequence