Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09145 and CA264_09150 are separated by 126 nucleotides CA264_09150 and CA264_09155 are separated by 188 nucleotides
CA264_09145: CA264_09145 - ammonia channel protein, at 2,143,987 to 2,145,348
_09145
CA264_09150: CA264_09150 - Crp/Fnr family transcriptional regulator, at 2,145,475 to 2,146,122
_09150
CA264_09155: CA264_09155 - anion permease, at 2,146,311 to 2,147,111
_09155
Position (kb)
2145
2146
2147 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2144.506 kb on + strand, within CA264_09145 at 2144.558 kb on + strand, within CA264_09145 at 2144.558 kb on + strand, within CA264_09145 at 2144.559 kb on - strand, within CA264_09145 at 2144.595 kb on + strand, within CA264_09145 at 2144.595 kb on + strand, within CA264_09145 at 2144.595 kb on + strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.596 kb on - strand, within CA264_09145 at 2144.654 kb on + strand, within CA264_09145 at 2144.655 kb on - strand, within CA264_09145 at 2144.680 kb on + strand, within CA264_09145 at 2144.684 kb on + strand, within CA264_09145 at 2144.685 kb on - strand, within CA264_09145 at 2144.685 kb on - strand, within CA264_09145 at 2144.751 kb on + strand, within CA264_09145 at 2144.751 kb on + strand, within CA264_09145 at 2144.863 kb on - strand, within CA264_09145 at 2144.868 kb on + strand, within CA264_09145 at 2144.869 kb on - strand, within CA264_09145 at 2144.979 kb on - strand, within CA264_09145 at 2144.979 kb on - strand, within CA264_09145 at 2144.979 kb on - strand, within CA264_09145 at 2145.071 kb on + strand, within CA264_09145 at 2145.071 kb on + strand, within CA264_09145 at 2145.134 kb on - strand, within CA264_09145 at 2145.134 kb on - strand, within CA264_09145 at 2145.341 kb on - strand at 2145.341 kb on - strand at 2145.442 kb on - strand at 2145.689 kb on - strand, within CA264_09150 at 2145.691 kb on + strand, within CA264_09150 at 2145.691 kb on + strand, within CA264_09150 at 2145.691 kb on + strand, within CA264_09150 at 2145.691 kb on + strand, within CA264_09150 at 2145.692 kb on - strand, within CA264_09150 at 2145.833 kb on - strand, within CA264_09150 at 2145.835 kb on - strand, within CA264_09150 at 2145.916 kb on - strand, within CA264_09150 at 2146.100 kb on + strand at 2146.100 kb on + strand at 2146.100 kb on + strand at 2146.101 kb on - strand at 2146.120 kb on + strand at 2146.120 kb on + strand at 2146.120 kb on + strand at 2146.120 kb on + strand at 2146.121 kb on - strand at 2146.121 kb on - strand at 2146.172 kb on + strand at 2146.172 kb on + strand at 2146.173 kb on - strand at 2146.173 kb on - strand at 2146.176 kb on + strand at 2146.182 kb on + strand at 2146.183 kb on - strand at 2146.203 kb on - strand at 2146.203 kb on - strand at 2146.253 kb on - strand at 2146.260 kb on - strand at 2146.274 kb on - strand at 2146.280 kb on - strand at 2146.284 kb on + strand at 2146.383 kb on - strand at 2146.384 kb on + strand at 2146.384 kb on + strand at 2146.385 kb on - strand at 2146.385 kb on - strand at 2146.385 kb on - strand at 2146.389 kb on - strand at 2146.393 kb on + strand, within CA264_09155 at 2146.444 kb on - strand, within CA264_09155 at 2146.575 kb on + strand, within CA264_09155 at 2146.579 kb on + strand, within CA264_09155 at 2146.580 kb on - strand, within CA264_09155 at 2146.608 kb on - strand, within CA264_09155 at 2146.788 kb on - strand, within CA264_09155 at 2146.798 kb on + strand, within CA264_09155 at 2146.894 kb on + strand, within CA264_09155 at 2146.921 kb on + strand, within CA264_09155 at 2146.938 kb on + strand, within CA264_09155 at 2146.938 kb on + strand, within CA264_09155 at 2146.939 kb on - strand, within CA264_09155 at 2146.939 kb on - strand, within CA264_09155 at 2146.943 kb on + strand, within CA264_09155 at 2147.080 kb on - strand at 2147.080 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,144,506 + CA264_09145 0.38 +1.4 2,144,558 + CA264_09145 0.42 +0.1 2,144,558 + CA264_09145 0.42 +0.3 2,144,559 - CA264_09145 0.42 -0.2 2,144,595 + CA264_09145 0.45 +0.7 2,144,595 + CA264_09145 0.45 +0.6 2,144,595 + CA264_09145 0.45 +0.5 2,144,596 - CA264_09145 0.45 +1.2 2,144,596 - CA264_09145 0.45 +0.5 2,144,596 - CA264_09145 0.45 -2.3 2,144,596 - CA264_09145 0.45 +0.8 2,144,596 - CA264_09145 0.45 -0.7 2,144,596 - CA264_09145 0.45 +0.8 2,144,596 - CA264_09145 0.45 +0.2 2,144,596 - CA264_09145 0.45 +2.0 2,144,654 + CA264_09145 0.49 -0.2 2,144,655 - CA264_09145 0.49 +1.2 2,144,680 + CA264_09145 0.51 -0.1 2,144,684 + CA264_09145 0.51 -2.4 2,144,685 - CA264_09145 0.51 +1.2 2,144,685 - CA264_09145 0.51 +0.0 2,144,751 + CA264_09145 0.56 +0.0 2,144,751 + CA264_09145 0.56 +0.9 2,144,863 - CA264_09145 0.64 -1.4 2,144,868 + CA264_09145 0.65 +1.0 2,144,869 - CA264_09145 0.65 -0.3 2,144,979 - CA264_09145 0.73 +0.6 2,144,979 - CA264_09145 0.73 +0.9 2,144,979 - CA264_09145 0.73 +0.6 2,145,071 + CA264_09145 0.80 +0.1 2,145,071 + CA264_09145 0.80 +0.4 2,145,134 - CA264_09145 0.84 -0.2 2,145,134 - CA264_09145 0.84 +0.6 2,145,341 - +0.5 2,145,341 - +1.3 2,145,442 - +0.7 2,145,689 - CA264_09150 0.33 -0.2 2,145,691 + CA264_09150 0.33 +0.3 2,145,691 + CA264_09150 0.33 +0.9 2,145,691 + CA264_09150 0.33 +0.3 2,145,691 + CA264_09150 0.33 +0.7 2,145,692 - CA264_09150 0.33 -0.2 2,145,833 - CA264_09150 0.55 -0.3 2,145,835 - CA264_09150 0.56 +1.3 2,145,916 - CA264_09150 0.68 +0.4 2,146,100 + +0.4 2,146,100 + +0.5 2,146,100 + -0.3 2,146,101 - +1.2 2,146,120 + +0.9 2,146,120 + +0.1 2,146,120 + -0.3 2,146,120 + +1.6 2,146,121 - -0.0 2,146,121 - +0.5 2,146,172 + -1.9 2,146,172 + +1.0 2,146,173 - -0.2 2,146,173 - +0.5 2,146,176 + +1.7 2,146,182 + +0.6 2,146,183 - +0.9 2,146,203 - -0.3 2,146,203 - +0.2 2,146,253 - -1.4 2,146,260 - -0.2 2,146,274 - +2.1 2,146,280 - +0.6 2,146,284 + +0.4 2,146,383 - -0.1 2,146,384 + -0.3 2,146,384 + +1.7 2,146,385 - -2.3 2,146,385 - -1.6 2,146,385 - -1.3 2,146,389 - -0.6 2,146,393 + CA264_09155 0.10 -0.4 2,146,444 - CA264_09155 0.17 -0.1 2,146,575 + CA264_09155 0.33 +0.6 2,146,579 + CA264_09155 0.33 -0.4 2,146,580 - CA264_09155 0.34 +0.3 2,146,608 - CA264_09155 0.37 -0.4 2,146,788 - CA264_09155 0.60 -1.9 2,146,798 + CA264_09155 0.61 +0.8 2,146,894 + CA264_09155 0.73 -2.4 2,146,921 + CA264_09155 0.76 -0.2 2,146,938 + CA264_09155 0.78 +0.2 2,146,938 + CA264_09155 0.78 -0.8 2,146,939 - CA264_09155 0.78 -0.5 2,146,939 - CA264_09155 0.78 -0.1 2,146,943 + CA264_09155 0.79 -1.6 2,147,080 - -1.0 2,147,080 - +2.0
Or see this region's nucleotide sequence