Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09120 and CA264_09125 are separated by 239 nucleotides CA264_09125 and CA264_09130 are separated by 205 nucleotides
CA264_09120: CA264_09120 - galactose-1-epimerase, at 2,135,613 to 2,136,797
_09120
CA264_09125: CA264_09125 - glucose/galactose MFS transporter, at 2,137,037 to 2,138,455
_09125
CA264_09130: CA264_09130 - hypothetical protein, at 2,138,661 to 2,140,955
_09130
Position (kb)
2137
2138
2139 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2136.071 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.142 kb on - strand, within CA264_09120 at 2136.234 kb on + strand, within CA264_09120 at 2136.285 kb on + strand, within CA264_09120 at 2136.291 kb on - strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.356 kb on + strand, within CA264_09120 at 2136.357 kb on - strand, within CA264_09120 at 2136.357 kb on - strand, within CA264_09120 at 2136.403 kb on + strand, within CA264_09120 at 2136.477 kb on + strand, within CA264_09120 at 2136.486 kb on - strand, within CA264_09120 at 2136.537 kb on + strand, within CA264_09120 at 2136.537 kb on + strand, within CA264_09120 at 2136.597 kb on + strand, within CA264_09120 at 2136.648 kb on + strand, within CA264_09120 at 2136.722 kb on + strand at 2136.766 kb on - strand at 2137.009 kb on - strand at 2137.011 kb on + strand at 2137.011 kb on + strand at 2137.019 kb on + strand at 2137.100 kb on - strand at 2137.183 kb on - strand, within CA264_09125 at 2137.231 kb on - strand, within CA264_09125 at 2137.257 kb on - strand, within CA264_09125 at 2137.277 kb on + strand, within CA264_09125 at 2137.278 kb on - strand, within CA264_09125 at 2137.327 kb on + strand, within CA264_09125 at 2137.328 kb on - strand, within CA264_09125 at 2137.402 kb on + strand, within CA264_09125 at 2137.402 kb on + strand, within CA264_09125 at 2137.402 kb on + strand, within CA264_09125 at 2137.403 kb on - strand, within CA264_09125 at 2137.403 kb on - strand, within CA264_09125 at 2137.406 kb on + strand, within CA264_09125 at 2137.407 kb on - strand, within CA264_09125 at 2137.433 kb on - strand, within CA264_09125 at 2137.433 kb on - strand, within CA264_09125 at 2137.434 kb on + strand, within CA264_09125 at 2137.478 kb on + strand, within CA264_09125 at 2137.479 kb on - strand, within CA264_09125 at 2137.479 kb on - strand, within CA264_09125 at 2137.482 kb on + strand, within CA264_09125 at 2137.483 kb on - strand, within CA264_09125 at 2137.553 kb on - strand, within CA264_09125 at 2137.640 kb on + strand, within CA264_09125 at 2137.684 kb on + strand, within CA264_09125 at 2137.780 kb on + strand, within CA264_09125 at 2137.780 kb on + strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.967 kb on - strand, within CA264_09125 at 2137.970 kb on + strand, within CA264_09125 at 2137.970 kb on + strand, within CA264_09125 at 2138.012 kb on - strand, within CA264_09125 at 2138.030 kb on - strand, within CA264_09125 at 2138.080 kb on - strand, within CA264_09125 at 2138.080 kb on - strand, within CA264_09125 at 2138.099 kb on - strand, within CA264_09125 at 2138.155 kb on + strand, within CA264_09125 at 2138.317 kb on + strand at 2138.318 kb on - strand at 2138.402 kb on + strand at 2138.402 kb on + strand at 2138.407 kb on + strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.408 kb on - strand at 2138.411 kb on + strand at 2138.412 kb on - strand at 2138.412 kb on - strand at 2138.412 kb on - strand at 2138.415 kb on - strand at 2138.453 kb on + strand at 2138.453 kb on + strand at 2138.465 kb on + strand at 2138.543 kb on + strand at 2138.544 kb on - strand at 2138.601 kb on + strand at 2138.602 kb on - strand at 2138.602 kb on - strand at 2138.676 kb on + strand at 2138.677 kb on - strand at 2138.677 kb on - strand at 2138.706 kb on - strand at 2138.850 kb on + strand at 2138.850 kb on + strand at 2138.851 kb on - strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.852 kb on + strand at 2138.853 kb on - strand at 2138.867 kb on + strand at 2138.867 kb on + strand at 2138.868 kb on - strand at 2138.868 kb on - strand at 2138.892 kb on + strand, within CA264_09130 at 2138.893 kb on - strand, within CA264_09130 at 2138.904 kb on + strand, within CA264_09130 at 2138.930 kb on - strand, within CA264_09130 at 2139.006 kb on + strand, within CA264_09130 at 2139.006 kb on + strand, within CA264_09130 at 2139.007 kb on - strand, within CA264_09130 at 2139.007 kb on - strand, within CA264_09130 at 2139.009 kb on + strand, within CA264_09130 at 2139.010 kb on - strand, within CA264_09130 at 2139.183 kb on - strand, within CA264_09130 at 2139.271 kb on + strand, within CA264_09130 at 2139.296 kb on - strand, within CA264_09130 at 2139.403 kb on + strand, within CA264_09130 at 2139.404 kb on - strand, within CA264_09130
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,136,071 + CA264_09120 0.39 -1.6 2,136,141 + CA264_09120 0.45 -1.5 2,136,141 + CA264_09120 0.45 -0.6 2,136,141 + CA264_09120 0.45 -1.8 2,136,142 - CA264_09120 0.45 -0.5 2,136,234 + CA264_09120 0.52 -1.4 2,136,285 + CA264_09120 0.57 +0.2 2,136,291 - CA264_09120 0.57 +0.8 2,136,354 + CA264_09120 0.63 -2.1 2,136,354 + CA264_09120 0.63 -2.0 2,136,354 + CA264_09120 0.63 -0.8 2,136,354 + CA264_09120 0.63 -2.2 2,136,355 - CA264_09120 0.63 -0.3 2,136,355 - CA264_09120 0.63 +0.3 2,136,355 - CA264_09120 0.63 -0.4 2,136,355 - CA264_09120 0.63 +0.1 2,136,356 + CA264_09120 0.63 -0.4 2,136,357 - CA264_09120 0.63 -0.7 2,136,357 - CA264_09120 0.63 -0.3 2,136,403 + CA264_09120 0.67 -1.3 2,136,477 + CA264_09120 0.73 +0.8 2,136,486 - CA264_09120 0.74 -0.5 2,136,537 + CA264_09120 0.78 -3.9 2,136,537 + CA264_09120 0.78 -2.1 2,136,597 + CA264_09120 0.83 -3.1 2,136,648 + CA264_09120 0.87 -1.9 2,136,722 + -1.4 2,136,766 - -1.4 2,137,009 - -0.4 2,137,011 + -1.1 2,137,011 + -1.0 2,137,019 + +0.5 2,137,100 - -0.2 2,137,183 - CA264_09125 0.10 -1.0 2,137,231 - CA264_09125 0.14 +0.0 2,137,257 - CA264_09125 0.16 +0.5 2,137,277 + CA264_09125 0.17 +0.2 2,137,278 - CA264_09125 0.17 -0.5 2,137,327 + CA264_09125 0.20 +1.4 2,137,328 - CA264_09125 0.21 +0.1 2,137,402 + CA264_09125 0.26 +0.3 2,137,402 + CA264_09125 0.26 -0.0 2,137,402 + CA264_09125 0.26 -1.1 2,137,403 - CA264_09125 0.26 +0.3 2,137,403 - CA264_09125 0.26 -0.8 2,137,406 + CA264_09125 0.26 +1.1 2,137,407 - CA264_09125 0.26 -1.6 2,137,433 - CA264_09125 0.28 +0.7 2,137,433 - CA264_09125 0.28 -0.6 2,137,434 + CA264_09125 0.28 -0.7 2,137,478 + CA264_09125 0.31 +0.6 2,137,479 - CA264_09125 0.31 +0.7 2,137,479 - CA264_09125 0.31 +0.8 2,137,482 + CA264_09125 0.31 -0.2 2,137,483 - CA264_09125 0.31 -0.4 2,137,553 - CA264_09125 0.36 -1.5 2,137,640 + CA264_09125 0.42 -1.0 2,137,684 + CA264_09125 0.46 +0.4 2,137,780 + CA264_09125 0.52 -0.9 2,137,780 + CA264_09125 0.52 +1.2 2,137,967 - CA264_09125 0.66 -0.2 2,137,967 - CA264_09125 0.66 +0.5 2,137,967 - CA264_09125 0.66 +0.2 2,137,970 + CA264_09125 0.66 -0.0 2,137,970 + CA264_09125 0.66 +0.1 2,138,012 - CA264_09125 0.69 +0.3 2,138,030 - CA264_09125 0.70 -0.1 2,138,080 - CA264_09125 0.74 -0.3 2,138,080 - CA264_09125 0.74 +1.4 2,138,099 - CA264_09125 0.75 -0.9 2,138,155 + CA264_09125 0.79 -0.8 2,138,317 + -0.7 2,138,318 - +0.5 2,138,402 + +0.1 2,138,402 + +0.4 2,138,407 + -0.0 2,138,408 - -0.4 2,138,408 - +0.4 2,138,408 - -0.3 2,138,408 - +1.0 2,138,411 + +0.6 2,138,412 - -0.4 2,138,412 - +0.3 2,138,412 - -0.9 2,138,415 - -0.0 2,138,453 + -0.8 2,138,453 + -0.9 2,138,465 + -1.2 2,138,543 + +0.2 2,138,544 - +0.4 2,138,601 + +1.0 2,138,602 - -0.7 2,138,602 - +0.3 2,138,676 + -0.6 2,138,677 - -0.3 2,138,677 - -0.7 2,138,706 - -1.2 2,138,850 + -0.7 2,138,850 + +0.4 2,138,851 - -0.3 2,138,852 + -0.5 2,138,852 + -0.3 2,138,852 + +0.3 2,138,852 + -0.1 2,138,853 - +1.1 2,138,867 + +1.0 2,138,867 + +0.0 2,138,868 - -0.7 2,138,868 - -0.4 2,138,892 + CA264_09130 0.10 +0.7 2,138,893 - CA264_09130 0.10 +0.6 2,138,904 + CA264_09130 0.11 +0.8 2,138,930 - CA264_09130 0.12 +0.0 2,139,006 + CA264_09130 0.15 -1.1 2,139,006 + CA264_09130 0.15 +0.4 2,139,007 - CA264_09130 0.15 -0.5 2,139,007 - CA264_09130 0.15 +1.2 2,139,009 + CA264_09130 0.15 -0.9 2,139,010 - CA264_09130 0.15 -0.8 2,139,183 - CA264_09130 0.23 +0.1 2,139,271 + CA264_09130 0.27 +0.5 2,139,296 - CA264_09130 0.28 +1.2 2,139,403 + CA264_09130 0.32 +0.4 2,139,404 - CA264_09130 0.32 -0.2
Or see this region's nucleotide sequence