Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09110 and CA264_09115 are separated by 554 nucleotides CA264_09115 and CA264_09120 are separated by 105 nucleotides
CA264_09110: CA264_09110 - mechanosensitive ion channel protein MscS, at 2,133,355 to 2,134,275
_09110
CA264_09115: CA264_09115 - hypothetical protein, at 2,134,830 to 2,135,507
_09115
CA264_09120: CA264_09120 - galactose-1-epimerase, at 2,135,613 to 2,136,797
_09120
Position (kb)
2134
2135
2136 Strain fitness (log2 ratio)
-2
-1
0
1 at 2133.942 kb on + strand, within CA264_09110 at 2133.945 kb on + strand, within CA264_09110 at 2133.946 kb on - strand, within CA264_09110 at 2134.009 kb on + strand, within CA264_09110 at 2134.010 kb on - strand, within CA264_09110 at 2134.056 kb on - strand, within CA264_09110 at 2134.092 kb on - strand, within CA264_09110 at 2134.092 kb on - strand, within CA264_09110 at 2134.220 kb on + strand at 2134.221 kb on - strand at 2134.290 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.368 kb on - strand at 2134.376 kb on + strand at 2134.386 kb on + strand at 2134.387 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.391 kb on - strand at 2134.395 kb on + strand at 2134.395 kb on + strand at 2134.396 kb on - strand at 2134.419 kb on + strand at 2134.420 kb on - strand at 2134.537 kb on - strand at 2134.580 kb on + strand at 2134.581 kb on - strand at 2134.589 kb on + strand at 2134.727 kb on + strand at 2134.815 kb on + strand at 2134.843 kb on + strand at 2134.863 kb on - strand at 2134.871 kb on + strand at 2134.872 kb on - strand at 2134.896 kb on + strand at 2134.896 kb on + strand at 2134.897 kb on - strand at 2134.905 kb on + strand, within CA264_09115 at 2135.041 kb on - strand, within CA264_09115 at 2135.194 kb on + strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.195 kb on - strand, within CA264_09115 at 2135.253 kb on + strand, within CA264_09115 at 2135.254 kb on - strand, within CA264_09115 at 2135.313 kb on + strand, within CA264_09115 at 2135.511 kb on + strand at 2135.515 kb on + strand at 2135.516 kb on - strand at 2135.516 kb on - strand at 2135.571 kb on + strand at 2135.576 kb on + strand at 2135.595 kb on - strand at 2135.612 kb on + strand at 2135.674 kb on + strand at 2135.723 kb on + strand at 2135.742 kb on - strand, within CA264_09120 at 2135.805 kb on + strand, within CA264_09120 at 2135.806 kb on - strand, within CA264_09120 at 2135.844 kb on - strand, within CA264_09120 at 2135.844 kb on - strand, within CA264_09120 at 2135.850 kb on + strand, within CA264_09120 at 2135.937 kb on + strand, within CA264_09120 at 2136.029 kb on + strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.030 kb on - strand, within CA264_09120 at 2136.071 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.141 kb on + strand, within CA264_09120 at 2136.142 kb on - strand, within CA264_09120 at 2136.234 kb on + strand, within CA264_09120 at 2136.285 kb on + strand, within CA264_09120 at 2136.291 kb on - strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.354 kb on + strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.355 kb on - strand, within CA264_09120 at 2136.356 kb on + strand, within CA264_09120 at 2136.357 kb on - strand, within CA264_09120 at 2136.357 kb on - strand, within CA264_09120 at 2136.403 kb on + strand, within CA264_09120 at 2136.477 kb on + strand, within CA264_09120 at 2136.486 kb on - strand, within CA264_09120
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 2,133,942 + CA264_09110 0.64 +0.5 2,133,945 + CA264_09110 0.64 +0.3 2,133,946 - CA264_09110 0.64 -0.5 2,134,009 + CA264_09110 0.71 -0.9 2,134,010 - CA264_09110 0.71 +0.6 2,134,056 - CA264_09110 0.76 +0.4 2,134,092 - CA264_09110 0.80 -0.1 2,134,092 - CA264_09110 0.80 -0.1 2,134,220 + -0.3 2,134,221 - -0.6 2,134,290 - -0.1 2,134,368 - +1.6 2,134,368 - -0.9 2,134,368 - -0.7 2,134,368 - -1.4 2,134,368 - -2.5 2,134,376 + -1.2 2,134,386 + -0.8 2,134,387 - -0.5 2,134,391 - -0.4 2,134,391 - -0.6 2,134,391 - +0.7 2,134,391 - -0.4 2,134,391 - -0.9 2,134,395 + -1.2 2,134,395 + -1.5 2,134,396 - -1.4 2,134,419 + -1.4 2,134,420 - -0.1 2,134,537 - +0.0 2,134,580 + -1.7 2,134,581 - -2.5 2,134,589 + -0.4 2,134,727 + -0.7 2,134,815 + -1.7 2,134,843 + -1.4 2,134,863 - +0.6 2,134,871 + -0.0 2,134,872 - -0.8 2,134,896 + -0.6 2,134,896 + +0.1 2,134,897 - +1.2 2,134,905 + CA264_09115 0.11 -2.4 2,135,041 - CA264_09115 0.31 -0.7 2,135,194 + CA264_09115 0.54 -2.5 2,135,195 - CA264_09115 0.54 -0.9 2,135,195 - CA264_09115 0.54 -0.5 2,135,195 - CA264_09115 0.54 -1.4 2,135,253 + CA264_09115 0.62 -1.2 2,135,254 - CA264_09115 0.63 -0.4 2,135,313 + CA264_09115 0.71 +0.5 2,135,511 + -2.7 2,135,515 + -2.3 2,135,516 - -1.2 2,135,516 - -1.7 2,135,571 + -2.1 2,135,576 + -1.6 2,135,595 - -1.1 2,135,612 + -2.4 2,135,674 + -1.5 2,135,723 + -0.3 2,135,742 - CA264_09120 0.11 -0.2 2,135,805 + CA264_09120 0.16 -1.5 2,135,806 - CA264_09120 0.16 -1.1 2,135,844 - CA264_09120 0.19 -0.3 2,135,844 - CA264_09120 0.19 +0.4 2,135,850 + CA264_09120 0.20 -1.2 2,135,937 + CA264_09120 0.27 -2.1 2,136,029 + CA264_09120 0.35 +0.4 2,136,030 - CA264_09120 0.35 +0.1 2,136,030 - CA264_09120 0.35 +0.0 2,136,030 - CA264_09120 0.35 -0.4 2,136,030 - CA264_09120 0.35 -1.1 2,136,030 - CA264_09120 0.35 +0.1 2,136,071 + CA264_09120 0.39 -1.6 2,136,141 + CA264_09120 0.45 -1.5 2,136,141 + CA264_09120 0.45 -0.6 2,136,141 + CA264_09120 0.45 -1.8 2,136,142 - CA264_09120 0.45 -0.5 2,136,234 + CA264_09120 0.52 -1.4 2,136,285 + CA264_09120 0.57 +0.2 2,136,291 - CA264_09120 0.57 +0.8 2,136,354 + CA264_09120 0.63 -2.1 2,136,354 + CA264_09120 0.63 -2.0 2,136,354 + CA264_09120 0.63 -0.8 2,136,354 + CA264_09120 0.63 -2.2 2,136,355 - CA264_09120 0.63 -0.3 2,136,355 - CA264_09120 0.63 +0.3 2,136,355 - CA264_09120 0.63 -0.4 2,136,355 - CA264_09120 0.63 +0.1 2,136,356 + CA264_09120 0.63 -0.4 2,136,357 - CA264_09120 0.63 -0.7 2,136,357 - CA264_09120 0.63 -0.3 2,136,403 + CA264_09120 0.67 -1.3 2,136,477 + CA264_09120 0.73 +0.8 2,136,486 - CA264_09120 0.74 -0.5
Or see this region's nucleotide sequence