Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07755

Experiment: m.b. copper (II) chloride 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07745 and CA264_07750 are separated by 350 nucleotidesCA264_07750 and CA264_07755 are separated by 3 nucleotidesCA264_07755 and CA264_07760 are separated by 105 nucleotides CA264_07745: CA264_07745 - hypothetical protein, at 1,795,222 to 1,795,473 _07745 CA264_07750: CA264_07750 - elongation factor P, at 1,795,824 to 1,796,387 _07750 CA264_07755: CA264_07755 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 1,796,391 to 1,796,882 _07755 CA264_07760: CA264_07760 - acetyl-CoA carboxylase biotin carboxylase subunit, at 1,796,988 to 1,798,334 _07760 Position (kb) 1796 1797Strain fitness (log2 ratio) -3 -2 -1 0 1at 1795.394 kb on + strand, within CA264_07745at 1795.394 kb on + strand, within CA264_07745at 1795.468 kb on + strandat 1795.489 kb on + strandat 1795.495 kb on + strandat 1795.496 kb on - strandat 1795.530 kb on + strandat 1795.531 kb on - strandat 1795.560 kb on - strandat 1795.584 kb on + strandat 1795.687 kb on + strandat 1795.687 kb on + strandat 1795.689 kb on + strandat 1795.690 kb on + strandat 1795.690 kb on - strandat 1795.746 kb on + strandat 1795.750 kb on + strandat 1795.750 kb on + strandat 1795.783 kb on + strandat 1795.784 kb on - strandat 1795.784 kb on - strandat 1795.789 kb on + strandat 1795.790 kb on - strandat 1795.813 kb on - strandat 1795.823 kb on + strandat 1795.823 kb on + strandat 1795.858 kb on + strandat 1796.057 kb on - strand, within CA264_07750at 1796.062 kb on - strand, within CA264_07750at 1796.226 kb on - strand, within CA264_07750at 1796.226 kb on - strand, within CA264_07750

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM
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1,795,394 + CA264_07745 0.68 +0.3
1,795,394 + CA264_07745 0.68 -0.5
1,795,468 + +0.2
1,795,489 + -0.7
1,795,495 + -2.3
1,795,496 - -0.6
1,795,530 + +0.5
1,795,531 - +0.2
1,795,560 - -0.3
1,795,584 + -0.8
1,795,687 + -0.2
1,795,687 + +0.3
1,795,689 + -0.5
1,795,690 + -0.1
1,795,690 - +0.3
1,795,746 + +1.3
1,795,750 + -0.7
1,795,750 + -2.0
1,795,783 + +0.0
1,795,784 - +0.1
1,795,784 - -0.5
1,795,789 + +0.5
1,795,790 - +0.7
1,795,813 - +1.1
1,795,823 + -3.1
1,795,823 + -3.5
1,795,858 + -1.0
1,796,057 - CA264_07750 0.41 -1.5
1,796,062 - CA264_07750 0.42 -2.0
1,796,226 - CA264_07750 0.71 -0.9
1,796,226 - CA264_07750 0.71 -2.1

Or see this region's nucleotide sequence