Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07330 and CA264_07335 are separated by 32 nucleotides CA264_07335 and CA264_07340 are separated by 357 nucleotides CA264_07340 and CA264_07345 are separated by 276 nucleotides CA264_07345 and CA264_07350 are separated by 76 nucleotides
CA264_07330: CA264_07330 - hypothetical protein, at 1,693,487 to 1,694,017
_07330
CA264_07335: CA264_07335 - transcriptional regulator, at 1,694,050 to 1,694,391
_07335
CA264_07340: CA264_07340 - hypothetical protein, at 1,694,749 to 1,695,312
_07340
CA264_07345: CA264_07345 - hypothetical protein, at 1,695,589 to 1,696,164
_07345
CA264_07350: CA264_07350 - hypothetical protein, at 1,696,241 to 1,696,936
_07350
Position (kb)
1694
1695
1696 Strain fitness (log2 ratio)
-1
0
1 at 1693.802 kb on + strand, within CA264_07330 at 1693.862 kb on + strand, within CA264_07330 at 1693.863 kb on - strand, within CA264_07330 at 1693.891 kb on - strand, within CA264_07330 at 1694.046 kb on - strand at 1694.111 kb on - strand, within CA264_07335 at 1694.150 kb on + strand, within CA264_07335 at 1694.151 kb on - strand, within CA264_07335 at 1694.151 kb on - strand, within CA264_07335 at 1694.170 kb on + strand, within CA264_07335 at 1694.199 kb on + strand, within CA264_07335 at 1694.200 kb on - strand, within CA264_07335 at 1694.200 kb on - strand, within CA264_07335 at 1694.382 kb on + strand at 1694.383 kb on - strand at 1694.416 kb on - strand at 1694.428 kb on + strand at 1694.431 kb on + strand at 1694.435 kb on + strand at 1694.438 kb on - strand at 1694.441 kb on + strand at 1694.442 kb on - strand at 1694.530 kb on + strand at 1694.601 kb on + strand at 1694.602 kb on - strand at 1694.602 kb on - strand at 1694.606 kb on + strand at 1694.606 kb on + strand at 1694.643 kb on - strand at 1694.725 kb on + strand at 1694.725 kb on + strand at 1694.751 kb on - strand at 1694.793 kb on - strand at 1694.907 kb on - strand, within CA264_07340 at 1694.948 kb on - strand, within CA264_07340 at 1695.149 kb on + strand, within CA264_07340 at 1695.161 kb on + strand, within CA264_07340 at 1695.173 kb on + strand, within CA264_07340 at 1695.194 kb on + strand, within CA264_07340 at 1695.195 kb on - strand, within CA264_07340 at 1695.240 kb on + strand, within CA264_07340 at 1695.241 kb on - strand, within CA264_07340 at 1695.286 kb on + strand at 1695.315 kb on + strand at 1695.315 kb on + strand at 1695.315 kb on + strand at 1695.316 kb on - strand at 1695.316 kb on - strand at 1695.333 kb on + strand at 1695.400 kb on + strand at 1695.401 kb on - strand at 1695.569 kb on - strand at 1695.598 kb on - strand at 1695.599 kb on + strand at 1695.600 kb on - strand at 1695.600 kb on - strand at 1695.618 kb on - strand at 1695.618 kb on - strand at 1695.620 kb on + strand at 1695.621 kb on - strand at 1695.624 kb on + strand at 1695.650 kb on + strand, within CA264_07345 at 1695.766 kb on - strand, within CA264_07345 at 1695.771 kb on - strand, within CA264_07345 at 1695.771 kb on - strand, within CA264_07345 at 1695.774 kb on + strand, within CA264_07345 at 1695.775 kb on - strand, within CA264_07345 at 1695.775 kb on - strand, within CA264_07345 at 1695.775 kb on - strand, within CA264_07345 at 1695.782 kb on + strand, within CA264_07345 at 1695.794 kb on + strand, within CA264_07345 at 1695.800 kb on + strand, within CA264_07345 at 1695.822 kb on - strand, within CA264_07345 at 1695.916 kb on - strand, within CA264_07345 at 1695.917 kb on + strand, within CA264_07345 at 1695.933 kb on - strand, within CA264_07345 at 1695.933 kb on - strand, within CA264_07345 at 1695.948 kb on - strand, within CA264_07345 at 1696.087 kb on - strand, within CA264_07345 at 1696.105 kb on - strand, within CA264_07345 at 1696.106 kb on + strand, within CA264_07345 at 1696.146 kb on + strand at 1696.147 kb on - strand at 1696.175 kb on + strand at 1696.176 kb on - strand at 1696.230 kb on - strand at 1696.242 kb on + strand at 1696.242 kb on + strand at 1696.243 kb on - strand at 1696.266 kb on + strand at 1696.267 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,693,802 + CA264_07330 0.59 -0.1 1,693,862 + CA264_07330 0.71 +0.6 1,693,863 - CA264_07330 0.71 -0.7 1,693,891 - CA264_07330 0.76 -0.8 1,694,046 - -0.5 1,694,111 - CA264_07335 0.18 +0.3 1,694,150 + CA264_07335 0.29 -0.4 1,694,151 - CA264_07335 0.30 +0.2 1,694,151 - CA264_07335 0.30 +0.7 1,694,170 + CA264_07335 0.35 +1.1 1,694,199 + CA264_07335 0.44 +1.5 1,694,200 - CA264_07335 0.44 -0.6 1,694,200 - CA264_07335 0.44 -0.1 1,694,382 + +0.6 1,694,383 - -0.2 1,694,416 - +1.2 1,694,428 + -0.3 1,694,431 + -1.0 1,694,435 + -0.2 1,694,438 - +0.9 1,694,441 + -0.1 1,694,442 - -0.4 1,694,530 + +0.4 1,694,601 + +0.8 1,694,602 - -0.8 1,694,602 - -0.8 1,694,606 + -0.2 1,694,606 + -0.7 1,694,643 - -0.3 1,694,725 + -0.7 1,694,725 + -0.0 1,694,751 - -0.2 1,694,793 - -0.1 1,694,907 - CA264_07340 0.28 -0.1 1,694,948 - CA264_07340 0.35 -0.0 1,695,149 + CA264_07340 0.71 +0.5 1,695,161 + CA264_07340 0.73 +0.3 1,695,173 + CA264_07340 0.75 +0.6 1,695,194 + CA264_07340 0.79 -0.2 1,695,195 - CA264_07340 0.79 -0.2 1,695,240 + CA264_07340 0.87 +0.4 1,695,241 - CA264_07340 0.87 +0.1 1,695,286 + +0.7 1,695,315 + -0.3 1,695,315 + -0.2 1,695,315 + -0.5 1,695,316 - -0.5 1,695,316 - +0.2 1,695,333 + +1.0 1,695,400 + +0.4 1,695,401 - +0.5 1,695,569 - -0.4 1,695,598 - -1.0 1,695,599 + +0.0 1,695,600 - -0.3 1,695,600 - -1.2 1,695,618 - -0.6 1,695,618 - -0.5 1,695,620 + +0.2 1,695,621 - +0.3 1,695,624 + +0.1 1,695,650 + CA264_07345 0.11 -0.8 1,695,766 - CA264_07345 0.31 -1.2 1,695,771 - CA264_07345 0.32 +0.6 1,695,771 - CA264_07345 0.32 +0.0 1,695,774 + CA264_07345 0.32 -0.1 1,695,775 - CA264_07345 0.32 -0.1 1,695,775 - CA264_07345 0.32 -0.3 1,695,775 - CA264_07345 0.32 -0.8 1,695,782 + CA264_07345 0.34 +1.6 1,695,794 + CA264_07345 0.36 -0.0 1,695,800 + CA264_07345 0.37 -1.0 1,695,822 - CA264_07345 0.40 -1.5 1,695,916 - CA264_07345 0.57 -0.4 1,695,917 + CA264_07345 0.57 +0.6 1,695,933 - CA264_07345 0.60 -1.3 1,695,933 - CA264_07345 0.60 -0.1 1,695,948 - CA264_07345 0.62 -1.3 1,696,087 - CA264_07345 0.86 -0.7 1,696,105 - CA264_07345 0.90 -0.2 1,696,106 + CA264_07345 0.90 -0.3 1,696,146 + -0.6 1,696,147 - -1.0 1,696,175 + +1.7 1,696,176 - -1.7 1,696,230 - -0.6 1,696,242 + +1.5 1,696,242 + +0.6 1,696,243 - -0.3 1,696,266 + -0.1 1,696,267 - -0.2
Or see this region's nucleotide sequence