Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06590 and CA264_06595 are separated by 149 nucleotides CA264_06595 and CA264_06600 are separated by 54 nucleotides
CA264_06590: CA264_06590 - 3-hydroxybutyryl-CoA dehydrogenase, at 1,518,641 to 1,519,531
_06590
CA264_06595: CA264_06595 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,519,681 to 1,520,493
_06595
CA264_06600: CA264_06600 - glycosyltransferase, at 1,520,548 to 1,521,717
_06600
Position (kb)
1519
1520
1521 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1518.720 kb on + strand at 1518.721 kb on - strand at 1518.729 kb on + strand at 1518.733 kb on + strand, within CA264_06590 at 1518.733 kb on + strand, within CA264_06590 at 1518.733 kb on + strand, within CA264_06590 at 1518.876 kb on + strand, within CA264_06590 at 1518.877 kb on - strand, within CA264_06590 at 1518.877 kb on - strand, within CA264_06590 at 1518.956 kb on + strand, within CA264_06590 at 1518.956 kb on + strand, within CA264_06590 at 1518.956 kb on + strand, within CA264_06590 at 1518.957 kb on - strand, within CA264_06590 at 1518.957 kb on - strand, within CA264_06590 at 1518.957 kb on - strand, within CA264_06590 at 1518.957 kb on - strand, within CA264_06590 at 1518.974 kb on - strand, within CA264_06590 at 1519.086 kb on + strand, within CA264_06590 at 1519.126 kb on - strand, within CA264_06590 at 1519.222 kb on + strand, within CA264_06590 at 1519.223 kb on - strand, within CA264_06590 at 1519.241 kb on + strand, within CA264_06590 at 1519.404 kb on - strand, within CA264_06590 at 1519.404 kb on - strand, within CA264_06590 at 1519.425 kb on + strand, within CA264_06590 at 1519.426 kb on - strand, within CA264_06590 at 1519.476 kb on - strand at 1519.539 kb on - strand at 1519.588 kb on - strand at 1519.592 kb on + strand at 1519.637 kb on + strand at 1519.637 kb on + strand at 1519.639 kb on + strand at 1519.643 kb on + strand at 1519.643 kb on + strand at 1519.643 kb on + strand at 1519.644 kb on - strand at 1520.476 kb on + strand at 1520.516 kb on + strand at 1520.517 kb on - strand at 1520.519 kb on + strand at 1520.519 kb on + strand at 1520.519 kb on + strand at 1520.520 kb on - strand at 1520.704 kb on + strand, within CA264_06600 at 1520.704 kb on + strand, within CA264_06600 at 1520.704 kb on + strand, within CA264_06600 at 1520.705 kb on - strand, within CA264_06600 at 1520.767 kb on + strand, within CA264_06600 at 1520.767 kb on + strand, within CA264_06600 at 1520.768 kb on - strand, within CA264_06600 at 1520.814 kb on + strand, within CA264_06600 at 1520.845 kb on + strand, within CA264_06600 at 1520.866 kb on - strand, within CA264_06600 at 1520.875 kb on + strand, within CA264_06600 at 1520.876 kb on - strand, within CA264_06600 at 1520.882 kb on + strand, within CA264_06600 at 1520.882 kb on + strand, within CA264_06600 at 1520.883 kb on - strand, within CA264_06600 at 1520.883 kb on - strand, within CA264_06600 at 1520.883 kb on - strand, within CA264_06600 at 1521.059 kb on - strand, within CA264_06600 at 1521.098 kb on - strand, within CA264_06600 at 1521.111 kb on + strand, within CA264_06600 at 1521.152 kb on - strand, within CA264_06600 at 1521.240 kb on - strand, within CA264_06600 at 1521.240 kb on - strand, within CA264_06600 at 1521.246 kb on + strand, within CA264_06600 at 1521.275 kb on + strand, within CA264_06600 at 1521.310 kb on + strand, within CA264_06600 at 1521.311 kb on - strand, within CA264_06600 at 1521.389 kb on + strand, within CA264_06600 at 1521.390 kb on - strand, within CA264_06600 at 1521.442 kb on + strand, within CA264_06600 at 1521.448 kb on + strand, within CA264_06600 at 1521.448 kb on + strand, within CA264_06600 at 1521.448 kb on + strand, within CA264_06600 at 1521.448 kb on + strand, within CA264_06600 at 1521.449 kb on - strand, within CA264_06600 at 1521.449 kb on - strand, within CA264_06600 at 1521.458 kb on - strand, within CA264_06600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,518,720 + -0.5 1,518,721 - +0.9 1,518,729 + +0.2 1,518,733 + CA264_06590 0.10 +0.1 1,518,733 + CA264_06590 0.10 +0.1 1,518,733 + CA264_06590 0.10 +0.5 1,518,876 + CA264_06590 0.26 +0.1 1,518,877 - CA264_06590 0.26 +0.3 1,518,877 - CA264_06590 0.26 +0.2 1,518,956 + CA264_06590 0.35 -1.0 1,518,956 + CA264_06590 0.35 +0.9 1,518,956 + CA264_06590 0.35 +0.5 1,518,957 - CA264_06590 0.35 +0.6 1,518,957 - CA264_06590 0.35 +0.1 1,518,957 - CA264_06590 0.35 +0.8 1,518,957 - CA264_06590 0.35 -0.0 1,518,974 - CA264_06590 0.37 +1.1 1,519,086 + CA264_06590 0.50 +0.2 1,519,126 - CA264_06590 0.54 +1.2 1,519,222 + CA264_06590 0.65 +0.5 1,519,223 - CA264_06590 0.65 +0.4 1,519,241 + CA264_06590 0.67 -0.8 1,519,404 - CA264_06590 0.86 +1.2 1,519,404 - CA264_06590 0.86 +0.7 1,519,425 + CA264_06590 0.88 -0.9 1,519,426 - CA264_06590 0.88 -1.9 1,519,476 - +0.3 1,519,539 - +0.4 1,519,588 - +0.3 1,519,592 + -0.3 1,519,637 + -0.1 1,519,637 + +0.4 1,519,639 + +0.6 1,519,643 + +0.6 1,519,643 + -0.2 1,519,643 + +1.3 1,519,644 - -0.5 1,520,476 + +0.5 1,520,516 + +0.3 1,520,517 - +0.1 1,520,519 + +0.9 1,520,519 + +1.4 1,520,519 + +1.1 1,520,520 - +0.4 1,520,704 + CA264_06600 0.13 +0.6 1,520,704 + CA264_06600 0.13 +1.2 1,520,704 + CA264_06600 0.13 +0.9 1,520,705 - CA264_06600 0.13 -0.4 1,520,767 + CA264_06600 0.19 +1.1 1,520,767 + CA264_06600 0.19 +0.5 1,520,768 - CA264_06600 0.19 +0.4 1,520,814 + CA264_06600 0.23 +0.8 1,520,845 + CA264_06600 0.25 +0.8 1,520,866 - CA264_06600 0.27 +0.3 1,520,875 + CA264_06600 0.28 +0.3 1,520,876 - CA264_06600 0.28 -0.5 1,520,882 + CA264_06600 0.29 +0.7 1,520,882 + CA264_06600 0.29 +1.1 1,520,883 - CA264_06600 0.29 +0.7 1,520,883 - CA264_06600 0.29 +1.3 1,520,883 - CA264_06600 0.29 -0.0 1,521,059 - CA264_06600 0.44 +1.6 1,521,098 - CA264_06600 0.47 +0.1 1,521,111 + CA264_06600 0.48 +1.3 1,521,152 - CA264_06600 0.52 -0.2 1,521,240 - CA264_06600 0.59 +1.0 1,521,240 - CA264_06600 0.59 +0.7 1,521,246 + CA264_06600 0.60 +1.0 1,521,275 + CA264_06600 0.62 +0.7 1,521,310 + CA264_06600 0.65 +2.3 1,521,311 - CA264_06600 0.65 +0.3 1,521,389 + CA264_06600 0.72 +1.4 1,521,390 - CA264_06600 0.72 +0.9 1,521,442 + CA264_06600 0.76 +2.6 1,521,448 + CA264_06600 0.77 +0.2 1,521,448 + CA264_06600 0.77 +1.4 1,521,448 + CA264_06600 0.77 +1.1 1,521,448 + CA264_06600 0.77 +1.4 1,521,449 - CA264_06600 0.77 +1.1 1,521,449 - CA264_06600 0.77 +0.1 1,521,458 - CA264_06600 0.78 +0.5
Or see this region's nucleotide sequence