Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06500 and CA264_06505 are separated by 53 nucleotides CA264_06505 and CA264_06510 are separated by 152 nucleotides
CA264_06500: CA264_06500 - peptidase M48, at 1,501,702 to 1,502,535
_06500
CA264_06505: CA264_06505 - hypothetical protein, at 1,502,589 to 1,503,731
_06505
CA264_06510: CA264_06510 - trehalose synthase, at 1,503,884 to 1,505,533
_06510
Position (kb)
1502
1503
1504 Strain fitness (log2 ratio)
-2
-1
0
1 at 1501.628 kb on - strand at 1501.631 kb on + strand at 1501.631 kb on + strand at 1501.631 kb on + strand at 1501.631 kb on + strand at 1501.651 kb on + strand at 1501.652 kb on - strand at 1501.811 kb on + strand, within CA264_06500 at 1501.811 kb on + strand, within CA264_06500 at 1501.811 kb on + strand, within CA264_06500 at 1501.812 kb on - strand, within CA264_06500 at 1501.812 kb on - strand, within CA264_06500 at 1501.812 kb on - strand, within CA264_06500 at 1501.812 kb on - strand, within CA264_06500 at 1501.930 kb on - strand, within CA264_06500 at 1501.930 kb on - strand, within CA264_06500 at 1501.933 kb on - strand, within CA264_06500 at 1501.933 kb on - strand, within CA264_06500 at 1501.934 kb on + strand, within CA264_06500 at 1501.934 kb on + strand, within CA264_06500 at 1501.934 kb on + strand, within CA264_06500 at 1501.946 kb on + strand, within CA264_06500 at 1501.947 kb on - strand, within CA264_06500 at 1501.966 kb on + strand, within CA264_06500 at 1501.967 kb on - strand, within CA264_06500 at 1501.967 kb on - strand, within CA264_06500 at 1501.968 kb on + strand, within CA264_06500 at 1502.051 kb on - strand, within CA264_06500 at 1502.106 kb on - strand, within CA264_06500 at 1502.148 kb on - strand, within CA264_06500 at 1502.156 kb on + strand, within CA264_06500 at 1502.269 kb on - strand, within CA264_06500 at 1502.329 kb on + strand, within CA264_06500 at 1502.329 kb on + strand, within CA264_06500 at 1502.330 kb on - strand, within CA264_06500 at 1502.330 kb on - strand, within CA264_06500 at 1502.332 kb on + strand, within CA264_06500 at 1502.361 kb on + strand, within CA264_06500 at 1502.448 kb on - strand, within CA264_06500 at 1502.448 kb on - strand, within CA264_06500 at 1502.623 kb on + strand at 1502.624 kb on - strand at 1502.627 kb on + strand at 1502.627 kb on + strand at 1502.628 kb on - strand at 1502.766 kb on - strand, within CA264_06505 at 1502.823 kb on + strand, within CA264_06505 at 1502.824 kb on - strand, within CA264_06505 at 1502.824 kb on - strand, within CA264_06505 at 1502.824 kb on - strand, within CA264_06505 at 1502.963 kb on + strand, within CA264_06505 at 1502.964 kb on - strand, within CA264_06505 at 1502.984 kb on - strand, within CA264_06505 at 1503.069 kb on + strand, within CA264_06505 at 1503.070 kb on - strand, within CA264_06505 at 1503.145 kb on + strand, within CA264_06505 at 1503.146 kb on - strand, within CA264_06505 at 1503.250 kb on - strand, within CA264_06505 at 1503.283 kb on + strand, within CA264_06505 at 1503.284 kb on - strand, within CA264_06505 at 1503.284 kb on - strand, within CA264_06505 at 1503.284 kb on - strand, within CA264_06505 at 1503.288 kb on + strand, within CA264_06505 at 1503.312 kb on - strand, within CA264_06505 at 1503.393 kb on + strand, within CA264_06505 at 1503.393 kb on + strand, within CA264_06505 at 1503.394 kb on - strand, within CA264_06505 at 1503.396 kb on - strand, within CA264_06505 at 1503.435 kb on - strand, within CA264_06505 at 1503.526 kb on - strand, within CA264_06505 at 1503.526 kb on - strand, within CA264_06505 at 1503.605 kb on - strand, within CA264_06505 at 1503.665 kb on + strand at 1503.667 kb on + strand at 1503.734 kb on + strand at 1503.734 kb on + strand at 1503.735 kb on - strand at 1503.811 kb on + strand at 1503.812 kb on - strand at 1503.818 kb on - strand at 1503.831 kb on + strand at 1503.831 kb on + strand at 1503.842 kb on + strand at 1503.868 kb on - strand at 1503.897 kb on + strand at 1503.897 kb on + strand at 1503.898 kb on - strand at 1503.898 kb on - strand at 1503.917 kb on - strand at 1503.917 kb on - strand at 1503.921 kb on - strand at 1504.002 kb on - strand at 1504.025 kb on - strand at 1504.078 kb on + strand, within CA264_06510 at 1504.088 kb on + strand, within CA264_06510 at 1504.088 kb on + strand, within CA264_06510 at 1504.092 kb on - strand, within CA264_06510 at 1504.166 kb on - strand, within CA264_06510 at 1504.188 kb on + strand, within CA264_06510 at 1504.188 kb on + strand, within CA264_06510 at 1504.189 kb on - strand, within CA264_06510 at 1504.189 kb on - strand at 1504.195 kb on + strand, within CA264_06510 at 1504.196 kb on - strand, within CA264_06510 at 1504.196 kb on - strand, within CA264_06510 at 1504.262 kb on + strand, within CA264_06510 at 1504.330 kb on + strand, within CA264_06510 at 1504.340 kb on + strand, within CA264_06510 at 1504.341 kb on - strand, within CA264_06510 at 1504.361 kb on + strand, within CA264_06510 at 1504.364 kb on + strand, within CA264_06510 at 1504.379 kb on + strand, within CA264_06510 at 1504.688 kb on + strand, within CA264_06510 at 1504.689 kb on - strand, within CA264_06510 at 1504.701 kb on - strand, within CA264_06510 at 1504.701 kb on - strand, within CA264_06510 at 1504.701 kb on - strand, within CA264_06510 at 1504.701 kb on - strand, within CA264_06510
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,501,628 - -0.1 1,501,631 + +0.2 1,501,631 + -0.2 1,501,631 + -0.3 1,501,631 + -0.2 1,501,651 + -1.3 1,501,652 - -0.0 1,501,811 + CA264_06500 0.13 -0.5 1,501,811 + CA264_06500 0.13 +0.4 1,501,811 + CA264_06500 0.13 +0.2 1,501,812 - CA264_06500 0.13 -2.5 1,501,812 - CA264_06500 0.13 -1.0 1,501,812 - CA264_06500 0.13 -0.0 1,501,812 - CA264_06500 0.13 -0.4 1,501,930 - CA264_06500 0.27 -0.2 1,501,930 - CA264_06500 0.27 -0.3 1,501,933 - CA264_06500 0.28 -0.0 1,501,933 - CA264_06500 0.28 -0.4 1,501,934 + CA264_06500 0.28 -1.6 1,501,934 + CA264_06500 0.28 -1.5 1,501,934 + CA264_06500 0.28 -0.9 1,501,946 + CA264_06500 0.29 -0.6 1,501,947 - CA264_06500 0.29 +1.3 1,501,966 + CA264_06500 0.32 +0.7 1,501,967 - CA264_06500 0.32 -0.7 1,501,967 - CA264_06500 0.32 -1.9 1,501,968 + CA264_06500 0.32 -1.3 1,502,051 - CA264_06500 0.42 -1.2 1,502,106 - CA264_06500 0.48 -0.9 1,502,148 - CA264_06500 0.53 -0.3 1,502,156 + CA264_06500 0.54 -1.4 1,502,269 - CA264_06500 0.68 -0.7 1,502,329 + CA264_06500 0.75 -0.8 1,502,329 + CA264_06500 0.75 -0.3 1,502,330 - CA264_06500 0.75 -0.2 1,502,330 - CA264_06500 0.75 -0.6 1,502,332 + CA264_06500 0.76 -0.6 1,502,361 + CA264_06500 0.79 -1.3 1,502,448 - CA264_06500 0.89 -1.7 1,502,448 - CA264_06500 0.89 -0.2 1,502,623 + +0.4 1,502,624 - +0.6 1,502,627 + -0.2 1,502,627 + +1.0 1,502,628 - +1.7 1,502,766 - CA264_06505 0.15 +0.1 1,502,823 + CA264_06505 0.20 +1.0 1,502,824 - CA264_06505 0.21 -0.2 1,502,824 - CA264_06505 0.21 -0.8 1,502,824 - CA264_06505 0.21 -2.0 1,502,963 + CA264_06505 0.33 +0.1 1,502,964 - CA264_06505 0.33 -0.3 1,502,984 - CA264_06505 0.35 -0.3 1,503,069 + CA264_06505 0.42 -0.0 1,503,070 - CA264_06505 0.42 +1.0 1,503,145 + CA264_06505 0.49 -0.5 1,503,146 - CA264_06505 0.49 +0.3 1,503,250 - CA264_06505 0.58 -2.4 1,503,283 + CA264_06505 0.61 +0.0 1,503,284 - CA264_06505 0.61 +0.0 1,503,284 - CA264_06505 0.61 -1.1 1,503,284 - CA264_06505 0.61 -0.7 1,503,288 + CA264_06505 0.61 -0.1 1,503,312 - CA264_06505 0.63 -0.2 1,503,393 + CA264_06505 0.70 -0.6 1,503,393 + CA264_06505 0.70 -0.9 1,503,394 - CA264_06505 0.70 +0.6 1,503,396 - CA264_06505 0.71 -0.3 1,503,435 - CA264_06505 0.74 +0.6 1,503,526 - CA264_06505 0.82 +1.2 1,503,526 - CA264_06505 0.82 -0.1 1,503,605 - CA264_06505 0.89 +0.1 1,503,665 + -1.9 1,503,667 + -1.6 1,503,734 + +0.2 1,503,734 + -0.9 1,503,735 - -0.2 1,503,811 + -1.3 1,503,812 - -0.2 1,503,818 - -0.3 1,503,831 + +1.5 1,503,831 + +0.8 1,503,842 + -1.3 1,503,868 - +0.1 1,503,897 + +1.6 1,503,897 + -1.0 1,503,898 - -0.7 1,503,898 - -1.4 1,503,917 - -0.2 1,503,917 - -0.8 1,503,921 - +0.3 1,504,002 - +0.1 1,504,025 - +0.6 1,504,078 + CA264_06510 0.12 -0.7 1,504,088 + CA264_06510 0.12 -0.6 1,504,088 + CA264_06510 0.12 -0.0 1,504,092 - CA264_06510 0.13 -0.6 1,504,166 - CA264_06510 0.17 +0.1 1,504,188 + CA264_06510 0.18 +0.2 1,504,188 + CA264_06510 0.18 +0.5 1,504,189 - CA264_06510 0.18 +0.3 1,504,189 - +0.3 1,504,195 + CA264_06510 0.19 -0.4 1,504,196 - CA264_06510 0.19 +0.3 1,504,196 - CA264_06510 0.19 -0.2 1,504,262 + CA264_06510 0.23 -0.1 1,504,330 + CA264_06510 0.27 -1.0 1,504,340 + CA264_06510 0.28 -0.6 1,504,341 - CA264_06510 0.28 -0.2 1,504,361 + CA264_06510 0.29 +0.4 1,504,364 + CA264_06510 0.29 -0.2 1,504,379 + CA264_06510 0.30 -0.4 1,504,688 + CA264_06510 0.49 -1.2 1,504,689 - CA264_06510 0.49 +0.7 1,504,701 - CA264_06510 0.50 +0.4 1,504,701 - CA264_06510 0.50 +0.7 1,504,701 - CA264_06510 0.50 +0.6 1,504,701 - CA264_06510 0.50 +0.7
Or see this region's nucleotide sequence