Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05645 and CA264_05650 are separated by 311 nucleotides CA264_05650 and CA264_05655 are separated by 180 nucleotides
CA264_05645: CA264_05645 - L-serine dehydratase, iron-sulfur-dependent subunit beta, at 1,311,780 to 1,312,457
_05645
CA264_05650: CA264_05650 - tryptophan 2,3-dioxygenase, at 1,312,769 to 1,313,734
_05650
CA264_05655: CA264_05655 - FAD-binding protein, at 1,313,915 to 1,315,495
_05655
Position (kb)
1312
1313
1314 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1311.769 kb on - strand at 1311.770 kb on + strand at 1311.770 kb on + strand at 1311.771 kb on - strand at 1311.775 kb on - strand at 1311.784 kb on - strand at 1311.784 kb on - strand at 1311.784 kb on - strand at 1311.802 kb on + strand at 1311.802 kb on + strand at 1311.858 kb on - strand, within CA264_05645 at 1311.933 kb on - strand, within CA264_05645 at 1312.001 kb on + strand, within CA264_05645 at 1312.001 kb on + strand, within CA264_05645 at 1312.139 kb on + strand, within CA264_05645 at 1312.140 kb on - strand, within CA264_05645 at 1312.178 kb on + strand, within CA264_05645 at 1312.179 kb on - strand, within CA264_05645 at 1312.179 kb on - strand, within CA264_05645 at 1312.241 kb on + strand, within CA264_05645 at 1312.241 kb on + strand, within CA264_05645 at 1312.292 kb on - strand, within CA264_05645 at 1312.313 kb on - strand, within CA264_05645 at 1312.457 kb on + strand at 1312.458 kb on - strand at 1312.458 kb on - strand at 1312.458 kb on - strand at 1312.532 kb on + strand at 1312.599 kb on + strand at 1312.707 kb on + strand at 1312.720 kb on - strand at 1312.720 kb on - strand at 1312.807 kb on - strand at 1312.807 kb on - strand at 1312.827 kb on - strand at 1312.893 kb on - strand, within CA264_05650 at 1312.901 kb on + strand, within CA264_05650 at 1312.901 kb on + strand, within CA264_05650 at 1312.901 kb on + strand, within CA264_05650 at 1312.969 kb on + strand, within CA264_05650 at 1313.077 kb on - strand, within CA264_05650 at 1313.230 kb on + strand, within CA264_05650 at 1313.312 kb on - strand, within CA264_05650 at 1313.388 kb on - strand, within CA264_05650 at 1313.420 kb on + strand, within CA264_05650 at 1313.436 kb on + strand, within CA264_05650 at 1313.436 kb on + strand, within CA264_05650 at 1313.491 kb on - strand, within CA264_05650 at 1313.521 kb on - strand, within CA264_05650 at 1313.527 kb on - strand, within CA264_05650 at 1313.546 kb on + strand, within CA264_05650 at 1313.546 kb on + strand, within CA264_05650 at 1313.546 kb on + strand, within CA264_05650 at 1313.622 kb on - strand, within CA264_05650 at 1313.757 kb on + strand at 1313.820 kb on + strand at 1313.931 kb on + strand at 1313.977 kb on - strand at 1313.981 kb on - strand at 1314.098 kb on + strand, within CA264_05655 at 1314.125 kb on - strand, within CA264_05655 at 1314.137 kb on + strand, within CA264_05655 at 1314.137 kb on + strand, within CA264_05655 at 1314.138 kb on - strand, within CA264_05655 at 1314.140 kb on - strand, within CA264_05655 at 1314.140 kb on - strand, within CA264_05655 at 1314.153 kb on + strand, within CA264_05655 at 1314.328 kb on + strand, within CA264_05655 at 1314.362 kb on + strand, within CA264_05655 at 1314.363 kb on - strand, within CA264_05655 at 1314.500 kb on - strand, within CA264_05655 at 1314.577 kb on + strand, within CA264_05655 at 1314.578 kb on - strand, within CA264_05655 at 1314.629 kb on + strand, within CA264_05655 at 1314.630 kb on - strand, within CA264_05655 at 1314.648 kb on + strand, within CA264_05655 at 1314.649 kb on - strand, within CA264_05655 at 1314.712 kb on - strand, within CA264_05655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,311,769 - +0.8 1,311,770 + -0.7 1,311,770 + -0.3 1,311,771 - +1.7 1,311,775 - +0.8 1,311,784 - +0.5 1,311,784 - +0.0 1,311,784 - +0.1 1,311,802 + +0.3 1,311,802 + +0.2 1,311,858 - CA264_05645 0.12 -1.8 1,311,933 - CA264_05645 0.23 -0.5 1,312,001 + CA264_05645 0.33 +0.1 1,312,001 + CA264_05645 0.33 -1.4 1,312,139 + CA264_05645 0.53 -0.3 1,312,140 - CA264_05645 0.53 -0.4 1,312,178 + CA264_05645 0.59 -0.8 1,312,179 - CA264_05645 0.59 +1.3 1,312,179 - CA264_05645 0.59 -0.8 1,312,241 + CA264_05645 0.68 +0.2 1,312,241 + CA264_05645 0.68 +1.1 1,312,292 - CA264_05645 0.76 -0.5 1,312,313 - CA264_05645 0.79 -0.3 1,312,457 + -0.8 1,312,458 - -0.5 1,312,458 - +0.2 1,312,458 - -0.0 1,312,532 + -0.1 1,312,599 + +2.7 1,312,707 + -0.5 1,312,720 - +1.6 1,312,720 - +0.8 1,312,807 - +0.9 1,312,807 - +0.6 1,312,827 - +0.2 1,312,893 - CA264_05650 0.13 +1.5 1,312,901 + CA264_05650 0.14 +0.9 1,312,901 + CA264_05650 0.14 +0.4 1,312,901 + CA264_05650 0.14 +0.5 1,312,969 + CA264_05650 0.21 +1.6 1,313,077 - CA264_05650 0.32 +0.7 1,313,230 + CA264_05650 0.48 -1.5 1,313,312 - CA264_05650 0.56 -0.8 1,313,388 - CA264_05650 0.64 -0.1 1,313,420 + CA264_05650 0.67 -0.3 1,313,436 + CA264_05650 0.69 +0.2 1,313,436 + CA264_05650 0.69 -0.5 1,313,491 - CA264_05650 0.75 +0.2 1,313,521 - CA264_05650 0.78 +0.2 1,313,527 - CA264_05650 0.78 -0.5 1,313,546 + CA264_05650 0.80 -0.4 1,313,546 + CA264_05650 0.80 +0.9 1,313,546 + CA264_05650 0.80 -0.2 1,313,622 - CA264_05650 0.88 +0.0 1,313,757 + -0.3 1,313,820 + +1.5 1,313,931 + +0.6 1,313,977 - +0.8 1,313,981 - +0.4 1,314,098 + CA264_05655 0.12 -0.2 1,314,125 - CA264_05655 0.13 +1.1 1,314,137 + CA264_05655 0.14 -1.0 1,314,137 + CA264_05655 0.14 +0.1 1,314,138 - CA264_05655 0.14 +0.7 1,314,140 - CA264_05655 0.14 +1.3 1,314,140 - CA264_05655 0.14 +0.8 1,314,153 + CA264_05655 0.15 -0.7 1,314,328 + CA264_05655 0.26 +1.2 1,314,362 + CA264_05655 0.28 +0.0 1,314,363 - CA264_05655 0.28 +1.0 1,314,500 - CA264_05655 0.37 +1.1 1,314,577 + CA264_05655 0.42 -1.9 1,314,578 - CA264_05655 0.42 +1.3 1,314,629 + CA264_05655 0.45 +0.2 1,314,630 - CA264_05655 0.45 +0.7 1,314,648 + CA264_05655 0.46 +0.1 1,314,649 - CA264_05655 0.46 +0.8 1,314,712 - CA264_05655 0.50 +0.0
Or see this region's nucleotide sequence