Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04815 and CA264_04820 are separated by 224 nucleotides CA264_04820 and CA264_04825 are separated by 80 nucleotides
CA264_04815: CA264_04815 - ATP-dependent protease subunit HslV, at 1,114,767 to 1,115,309
_04815
CA264_04820: CA264_04820 - deoxyhypusine synthase, at 1,115,534 to 1,116,505
_04820
CA264_04825: CA264_04825 - catalase HPII, at 1,116,586 to 1,118,796
_04825
Position (kb)
1115
1116
1117 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1114.554 kb on - strand at 1114.559 kb on + strand at 1114.559 kb on + strand at 1114.560 kb on - strand at 1114.560 kb on - strand at 1114.568 kb on + strand at 1114.613 kb on + strand at 1114.614 kb on - strand at 1114.614 kb on - strand at 1114.614 kb on - strand at 1114.629 kb on + strand at 1114.629 kb on + strand at 1114.693 kb on - strand at 1114.699 kb on - strand at 1114.699 kb on - strand at 1114.714 kb on - strand at 1114.719 kb on - strand at 1114.736 kb on + strand at 1114.736 kb on + strand at 1114.737 kb on - strand at 1114.931 kb on + strand, within CA264_04815 at 1115.044 kb on - strand, within CA264_04815 at 1115.078 kb on + strand, within CA264_04815 at 1115.162 kb on + strand, within CA264_04815 at 1115.162 kb on + strand, within CA264_04815 at 1115.162 kb on + strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.163 kb on - strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.166 kb on + strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.167 kb on - strand, within CA264_04815 at 1115.192 kb on - strand, within CA264_04815 at 1115.243 kb on + strand, within CA264_04815 at 1115.244 kb on - strand, within CA264_04815 at 1115.264 kb on + strand at 1115.264 kb on + strand at 1115.264 kb on + strand at 1115.265 kb on - strand at 1115.265 kb on - strand at 1115.268 kb on + strand at 1115.268 kb on + strand at 1115.270 kb on + strand at 1115.337 kb on - strand at 1115.337 kb on - strand at 1115.365 kb on + strand at 1115.373 kb on - strand at 1115.417 kb on - strand at 1115.445 kb on - strand at 1115.447 kb on - strand at 1115.454 kb on - strand at 1115.454 kb on - strand at 1115.460 kb on + strand at 1115.534 kb on - strand at 1115.534 kb on - strand at 1115.635 kb on + strand, within CA264_04820 at 1115.636 kb on - strand, within CA264_04820 at 1115.669 kb on - strand, within CA264_04820 at 1115.718 kb on + strand, within CA264_04820 at 1115.718 kb on + strand, within CA264_04820 at 1115.758 kb on + strand, within CA264_04820 at 1115.759 kb on - strand, within CA264_04820 at 1115.786 kb on + strand, within CA264_04820 at 1115.875 kb on + strand, within CA264_04820 at 1115.876 kb on - strand, within CA264_04820 at 1115.957 kb on + strand, within CA264_04820 at 1116.098 kb on - strand, within CA264_04820 at 1116.113 kb on + strand, within CA264_04820 at 1116.113 kb on + strand, within CA264_04820 at 1116.113 kb on + strand, within CA264_04820 at 1116.113 kb on + strand, within CA264_04820 at 1116.114 kb on - strand, within CA264_04820 at 1116.114 kb on - strand, within CA264_04820 at 1116.154 kb on + strand, within CA264_04820 at 1116.154 kb on + strand, within CA264_04820 at 1116.155 kb on - strand, within CA264_04820 at 1116.177 kb on - strand, within CA264_04820 at 1116.227 kb on - strand, within CA264_04820 at 1116.227 kb on - strand, within CA264_04820 at 1116.257 kb on - strand, within CA264_04820 at 1116.336 kb on - strand, within CA264_04820 at 1116.369 kb on - strand, within CA264_04820 at 1116.415 kb on + strand at 1116.440 kb on + strand at 1116.499 kb on + strand at 1116.500 kb on - strand at 1116.503 kb on + strand at 1116.503 kb on + strand at 1116.503 kb on + strand at 1116.503 kb on + strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.504 kb on - strand at 1116.508 kb on - strand at 1116.508 kb on - strand at 1116.508 kb on - strand at 1116.519 kb on + strand at 1116.533 kb on + strand at 1116.551 kb on + strand at 1116.552 kb on - strand at 1116.580 kb on + strand at 1116.637 kb on - strand at 1116.648 kb on + strand at 1116.694 kb on + strand at 1116.695 kb on - strand at 1116.716 kb on - strand at 1116.716 kb on - strand at 1116.741 kb on - strand at 1116.744 kb on + strand at 1116.754 kb on + strand at 1116.757 kb on - strand at 1116.817 kb on - strand, within CA264_04825 at 1116.868 kb on + strand, within CA264_04825 at 1116.868 kb on + strand, within CA264_04825 at 1116.868 kb on + strand, within CA264_04825 at 1116.868 kb on + strand, within CA264_04825 at 1116.869 kb on - strand, within CA264_04825 at 1116.869 kb on - strand, within CA264_04825 at 1116.869 kb on - strand, within CA264_04825 at 1116.869 kb on - strand, within CA264_04825 at 1116.869 kb on - strand, within CA264_04825 at 1116.889 kb on + strand, within CA264_04825 at 1116.893 kb on + strand, within CA264_04825 at 1116.893 kb on + strand, within CA264_04825 at 1116.893 kb on + strand, within CA264_04825 at 1116.893 kb on + strand, within CA264_04825 at 1116.894 kb on - strand, within CA264_04825 at 1116.894 kb on - strand, within CA264_04825 at 1116.894 kb on - strand, within CA264_04825 at 1116.905 kb on + strand, within CA264_04825 at 1116.905 kb on + strand, within CA264_04825 at 1116.937 kb on - strand, within CA264_04825 at 1116.979 kb on + strand, within CA264_04825 at 1117.020 kb on + strand, within CA264_04825 at 1117.020 kb on + strand, within CA264_04825 at 1117.021 kb on - strand, within CA264_04825 at 1117.123 kb on - strand, within CA264_04825 at 1117.123 kb on - strand, within CA264_04825 at 1117.126 kb on + strand, within CA264_04825 at 1117.190 kb on + strand, within CA264_04825 at 1117.191 kb on - strand, within CA264_04825 at 1117.191 kb on - strand, within CA264_04825 at 1117.249 kb on + strand, within CA264_04825 at 1117.249 kb on + strand, within CA264_04825 at 1117.291 kb on + strand, within CA264_04825 at 1117.321 kb on + strand, within CA264_04825 at 1117.330 kb on + strand, within CA264_04825 at 1117.356 kb on + strand, within CA264_04825 at 1117.357 kb on - strand, within CA264_04825 at 1117.410 kb on - strand, within CA264_04825 at 1117.410 kb on - strand, within CA264_04825 at 1117.441 kb on + strand, within CA264_04825 at 1117.441 kb on + strand, within CA264_04825 at 1117.446 kb on + strand, within CA264_04825 at 1117.474 kb on + strand, within CA264_04825
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,114,554 - +0.9 1,114,559 + -0.1 1,114,559 + +0.0 1,114,560 - +2.1 1,114,560 - +1.1 1,114,568 + +1.6 1,114,613 + +1.1 1,114,614 - +0.6 1,114,614 - +1.0 1,114,614 - +0.9 1,114,629 + +0.0 1,114,629 + +0.3 1,114,693 - +1.0 1,114,699 - +1.5 1,114,699 - +0.6 1,114,714 - +0.2 1,114,719 - +0.4 1,114,736 + +1.5 1,114,736 + -0.3 1,114,737 - +0.5 1,114,931 + CA264_04815 0.30 -1.0 1,115,044 - CA264_04815 0.51 -0.6 1,115,078 + CA264_04815 0.57 -1.0 1,115,162 + CA264_04815 0.73 -0.3 1,115,162 + CA264_04815 0.73 +0.8 1,115,162 + CA264_04815 0.73 -2.6 1,115,163 - CA264_04815 0.73 -1.8 1,115,163 - CA264_04815 0.73 -1.6 1,115,163 - CA264_04815 0.73 -1.1 1,115,163 - CA264_04815 0.73 +0.8 1,115,166 + CA264_04815 0.73 -0.3 1,115,166 + CA264_04815 0.73 -1.0 1,115,166 + CA264_04815 0.73 -1.8 1,115,166 + CA264_04815 0.73 -1.0 1,115,166 + CA264_04815 0.73 +0.4 1,115,167 - CA264_04815 0.74 +0.1 1,115,167 - CA264_04815 0.74 -0.4 1,115,167 - CA264_04815 0.74 -1.2 1,115,167 - CA264_04815 0.74 -0.3 1,115,167 - CA264_04815 0.74 -0.1 1,115,192 - CA264_04815 0.78 -1.2 1,115,243 + CA264_04815 0.88 -1.5 1,115,244 - CA264_04815 0.88 -0.3 1,115,264 + -0.4 1,115,264 + -1.4 1,115,264 + -0.5 1,115,265 - -0.2 1,115,265 - -0.7 1,115,268 + +0.2 1,115,268 + -0.2 1,115,270 + -0.9 1,115,337 - -0.7 1,115,337 - -0.1 1,115,365 + +1.4 1,115,373 - -0.1 1,115,417 - -0.6 1,115,445 - -0.9 1,115,447 - -1.3 1,115,454 - +0.5 1,115,454 - -0.4 1,115,460 + -0.4 1,115,534 - -1.1 1,115,534 - -0.5 1,115,635 + CA264_04820 0.10 -1.1 1,115,636 - CA264_04820 0.10 -1.0 1,115,669 - CA264_04820 0.14 -0.7 1,115,718 + CA264_04820 0.19 -1.9 1,115,718 + CA264_04820 0.19 +0.1 1,115,758 + CA264_04820 0.23 -1.0 1,115,759 - CA264_04820 0.23 +0.3 1,115,786 + CA264_04820 0.26 +0.1 1,115,875 + CA264_04820 0.35 -0.5 1,115,876 - CA264_04820 0.35 -2.7 1,115,957 + CA264_04820 0.44 -0.0 1,116,098 - CA264_04820 0.58 -0.4 1,116,113 + CA264_04820 0.60 -1.9 1,116,113 + CA264_04820 0.60 +0.8 1,116,113 + CA264_04820 0.60 -2.0 1,116,113 + CA264_04820 0.60 +0.6 1,116,114 - CA264_04820 0.60 +0.5 1,116,114 - CA264_04820 0.60 -0.8 1,116,154 + CA264_04820 0.64 +1.1 1,116,154 + CA264_04820 0.64 +0.1 1,116,155 - CA264_04820 0.64 -1.2 1,116,177 - CA264_04820 0.66 -0.2 1,116,227 - CA264_04820 0.71 -0.5 1,116,227 - CA264_04820 0.71 +0.5 1,116,257 - CA264_04820 0.74 -0.2 1,116,336 - CA264_04820 0.83 -1.8 1,116,369 - CA264_04820 0.86 +0.9 1,116,415 + -0.4 1,116,440 + -0.4 1,116,499 + -0.2 1,116,500 - -0.2 1,116,503 + -0.2 1,116,503 + -0.2 1,116,503 + +0.2 1,116,503 + -0.8 1,116,504 - -0.0 1,116,504 - -0.6 1,116,504 - -1.2 1,116,504 - -0.5 1,116,504 - +0.9 1,116,504 - +0.7 1,116,504 - -0.2 1,116,504 - -0.1 1,116,508 - -1.6 1,116,508 - -0.1 1,116,508 - +0.3 1,116,519 + -1.2 1,116,533 + -1.1 1,116,551 + -0.3 1,116,552 - +0.1 1,116,580 + -1.4 1,116,637 - -0.1 1,116,648 + +0.2 1,116,694 + +0.3 1,116,695 - +0.3 1,116,716 - -0.5 1,116,716 - -0.1 1,116,741 - -0.7 1,116,744 + +0.2 1,116,754 + +0.1 1,116,757 - +0.4 1,116,817 - CA264_04825 0.10 +2.8 1,116,868 + CA264_04825 0.13 +1.5 1,116,868 + CA264_04825 0.13 -0.4 1,116,868 + CA264_04825 0.13 +0.9 1,116,868 + CA264_04825 0.13 -0.2 1,116,869 - CA264_04825 0.13 -0.2 1,116,869 - CA264_04825 0.13 +0.7 1,116,869 - CA264_04825 0.13 -0.6 1,116,869 - CA264_04825 0.13 -0.6 1,116,869 - CA264_04825 0.13 -0.5 1,116,889 + CA264_04825 0.14 -1.8 1,116,893 + CA264_04825 0.14 +1.0 1,116,893 + CA264_04825 0.14 +1.0 1,116,893 + CA264_04825 0.14 +0.2 1,116,893 + CA264_04825 0.14 +0.4 1,116,894 - CA264_04825 0.14 -0.9 1,116,894 - CA264_04825 0.14 -1.2 1,116,894 - CA264_04825 0.14 +0.5 1,116,905 + CA264_04825 0.14 +0.3 1,116,905 + CA264_04825 0.14 -0.1 1,116,937 - CA264_04825 0.16 -0.2 1,116,979 + CA264_04825 0.18 +0.7 1,117,020 + CA264_04825 0.20 +0.3 1,117,020 + CA264_04825 0.20 +1.2 1,117,021 - CA264_04825 0.20 -0.7 1,117,123 - CA264_04825 0.24 -0.3 1,117,123 - CA264_04825 0.24 -0.6 1,117,126 + CA264_04825 0.24 -0.3 1,117,190 + CA264_04825 0.27 +0.7 1,117,191 - CA264_04825 0.27 -0.5 1,117,191 - CA264_04825 0.27 -0.2 1,117,249 + CA264_04825 0.30 -0.6 1,117,249 + CA264_04825 0.30 +0.0 1,117,291 + CA264_04825 0.32 -0.3 1,117,321 + CA264_04825 0.33 -0.4 1,117,330 + CA264_04825 0.34 +0.8 1,117,356 + CA264_04825 0.35 +0.1 1,117,357 - CA264_04825 0.35 +0.2 1,117,410 - CA264_04825 0.37 +0.3 1,117,410 - CA264_04825 0.37 -1.5 1,117,441 + CA264_04825 0.39 +1.1 1,117,441 + CA264_04825 0.39 -0.1 1,117,446 + CA264_04825 0.39 -0.4 1,117,474 + CA264_04825 0.40 +0.2
Or see this region's nucleotide sequence