Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04545 and CA264_04550 are separated by 4 nucleotides CA264_04550 and CA264_04555 are separated by 129 nucleotides
CA264_04545: CA264_04545 - dTDP-Rha--alpha-D-GlcNAc-pyrophosphate polyprenol alpha-3-L-rhamnosyltransferase, at 1,049,757 to 1,050,764
_04545
CA264_04550: CA264_04550 - nucleoid-associated protein, YbaB/EbfC family, at 1,050,769 to 1,051,104
_04550
CA264_04555: CA264_04555 - T9SS C-terminal target domain-containing protein, at 1,051,234 to 1,053,171
_04555
Position (kb)
1050
1051
1052 Strain fitness (log2 ratio)
-2
-1
0
1 at 1051.021 kb on - strand, within CA264_04550 at 1051.095 kb on + strand at 1051.095 kb on + strand at 1051.095 kb on + strand at 1051.104 kb on + strand at 1051.122 kb on + strand at 1051.159 kb on + strand at 1051.159 kb on + strand at 1051.160 kb on - strand at 1051.167 kb on + strand at 1051.167 kb on + strand at 1051.169 kb on + strand at 1051.169 kb on + strand at 1051.197 kb on + strand at 1051.210 kb on + strand at 1051.296 kb on + strand at 1051.383 kb on + strand at 1051.384 kb on - strand at 1051.418 kb on + strand at 1051.452 kb on + strand, within CA264_04555 at 1051.496 kb on + strand, within CA264_04555 at 1051.531 kb on - strand, within CA264_04555 at 1051.535 kb on + strand, within CA264_04555 at 1051.591 kb on + strand, within CA264_04555 at 1051.591 kb on + strand, within CA264_04555 at 1051.592 kb on - strand, within CA264_04555 at 1051.592 kb on - strand, within CA264_04555 at 1051.617 kb on + strand, within CA264_04555 at 1051.685 kb on + strand, within CA264_04555 at 1051.686 kb on - strand, within CA264_04555 at 1051.694 kb on - strand, within CA264_04555 at 1051.694 kb on - strand, within CA264_04555 at 1051.694 kb on - strand, within CA264_04555 at 1051.694 kb on - strand, within CA264_04555 at 1051.716 kb on - strand, within CA264_04555 at 1051.735 kb on + strand, within CA264_04555 at 1051.735 kb on + strand, within CA264_04555 at 1051.870 kb on - strand, within CA264_04555 at 1051.870 kb on - strand, within CA264_04555 at 1051.871 kb on + strand, within CA264_04555 at 1051.871 kb on + strand, within CA264_04555 at 1051.871 kb on + strand, within CA264_04555 at 1051.872 kb on - strand, within CA264_04555 at 1051.872 kb on - strand, within CA264_04555 at 1051.872 kb on - strand, within CA264_04555 at 1051.872 kb on - strand, within CA264_04555 at 1051.872 kb on - strand, within CA264_04555 at 1051.902 kb on + strand, within CA264_04555 at 1051.905 kb on - strand, within CA264_04555 at 1051.905 kb on - strand, within CA264_04555 at 1051.905 kb on - strand, within CA264_04555 at 1051.969 kb on - strand, within CA264_04555 at 1051.969 kb on - strand, within CA264_04555 at 1051.992 kb on + strand, within CA264_04555 at 1051.993 kb on - strand, within CA264_04555 at 1052.073 kb on - strand, within CA264_04555 at 1052.073 kb on - strand, within CA264_04555
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,051,021 - CA264_04550 0.75 -2.7 1,051,095 + -0.7 1,051,095 + -0.8 1,051,095 + -0.4 1,051,104 + -0.3 1,051,122 + +0.6 1,051,159 + -1.5 1,051,159 + +0.6 1,051,160 - -0.4 1,051,167 + -0.3 1,051,167 + -0.3 1,051,169 + +0.5 1,051,169 + +0.8 1,051,197 + +0.0 1,051,210 + +0.4 1,051,296 + +0.2 1,051,383 + -0.4 1,051,384 - -0.7 1,051,418 + -0.5 1,051,452 + CA264_04555 0.11 +1.1 1,051,496 + CA264_04555 0.14 -1.8 1,051,531 - CA264_04555 0.15 -0.8 1,051,535 + CA264_04555 0.16 -0.2 1,051,591 + CA264_04555 0.18 +0.2 1,051,591 + CA264_04555 0.18 -0.2 1,051,592 - CA264_04555 0.18 -0.1 1,051,592 - CA264_04555 0.18 +0.0 1,051,617 + CA264_04555 0.20 -0.6 1,051,685 + CA264_04555 0.23 +0.1 1,051,686 - CA264_04555 0.23 -0.2 1,051,694 - CA264_04555 0.24 +0.2 1,051,694 - CA264_04555 0.24 -0.4 1,051,694 - CA264_04555 0.24 +0.8 1,051,694 - CA264_04555 0.24 -0.4 1,051,716 - CA264_04555 0.25 -1.0 1,051,735 + CA264_04555 0.26 -0.7 1,051,735 + CA264_04555 0.26 -0.8 1,051,870 - CA264_04555 0.33 -0.6 1,051,870 - CA264_04555 0.33 -0.3 1,051,871 + CA264_04555 0.33 -0.9 1,051,871 + CA264_04555 0.33 -0.4 1,051,871 + CA264_04555 0.33 -0.1 1,051,872 - CA264_04555 0.33 +0.9 1,051,872 - CA264_04555 0.33 +0.1 1,051,872 - CA264_04555 0.33 -0.4 1,051,872 - CA264_04555 0.33 -0.5 1,051,872 - CA264_04555 0.33 -0.1 1,051,902 + CA264_04555 0.34 -1.2 1,051,905 - CA264_04555 0.35 -0.2 1,051,905 - CA264_04555 0.35 -0.2 1,051,905 - CA264_04555 0.35 +1.4 1,051,969 - CA264_04555 0.38 -0.2 1,051,969 - CA264_04555 0.38 -0.3 1,051,992 + CA264_04555 0.39 +0.4 1,051,993 - CA264_04555 0.39 +0.1 1,052,073 - CA264_04555 0.43 -0.5 1,052,073 - CA264_04555 0.43 +0.1
Or see this region's nucleotide sequence