Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04500 and CA264_04505 are separated by 62 nucleotides CA264_04505 and CA264_04510 are separated by 79 nucleotides
CA264_04500: CA264_04500 - bacitracin ABC transporter ATP-binding protein, at 1,039,020 to 1,039,955
_04500
CA264_04505: CA264_04505 - ABC transporter permease, at 1,040,018 to 1,040,797
_04505
CA264_04510: CA264_04510 - DNA ligase (NAD(+)) LigA, at 1,040,877 to 1,042,886
_04510
Position (kb)
1040
1041
1042
1043 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1039.914 kb on - strand at 1039.979 kb on + strand at 1039.983 kb on + strand at 1039.983 kb on + strand at 1040.017 kb on + strand at 1040.018 kb on - strand at 1040.018 kb on - strand at 1040.028 kb on + strand at 1040.033 kb on + strand at 1040.033 kb on + strand at 1040.033 kb on + strand at 1040.034 kb on - strand at 1040.125 kb on + strand, within CA264_04505 at 1040.126 kb on - strand, within CA264_04505 at 1040.129 kb on + strand, within CA264_04505 at 1040.129 kb on + strand, within CA264_04505 at 1040.129 kb on + strand, within CA264_04505 at 1040.130 kb on - strand, within CA264_04505 at 1040.130 kb on - strand, within CA264_04505 at 1040.220 kb on - strand, within CA264_04505 at 1040.240 kb on - strand, within CA264_04505 at 1040.246 kb on - strand, within CA264_04505 at 1040.246 kb on - strand, within CA264_04505 at 1040.246 kb on - strand, within CA264_04505 at 1040.257 kb on - strand, within CA264_04505 at 1040.310 kb on - strand, within CA264_04505 at 1040.339 kb on + strand, within CA264_04505 at 1040.340 kb on - strand, within CA264_04505 at 1040.340 kb on - strand, within CA264_04505 at 1040.406 kb on - strand, within CA264_04505 at 1040.488 kb on + strand, within CA264_04505 at 1040.497 kb on + strand, within CA264_04505 at 1040.498 kb on - strand, within CA264_04505 at 1040.524 kb on + strand, within CA264_04505 at 1040.548 kb on + strand, within CA264_04505 at 1040.571 kb on + strand, within CA264_04505 at 1040.572 kb on - strand, within CA264_04505 at 1040.575 kb on + strand, within CA264_04505 at 1040.603 kb on - strand, within CA264_04505 at 1040.639 kb on + strand, within CA264_04505 at 1040.639 kb on + strand, within CA264_04505 at 1040.640 kb on - strand, within CA264_04505 at 1040.640 kb on - strand, within CA264_04505 at 1040.640 kb on - strand, within CA264_04505 at 1040.756 kb on - strand at 1040.756 kb on - strand at 1040.758 kb on - strand at 1040.758 kb on - strand at 1040.820 kb on - strand at 1042.854 kb on + strand at 1042.987 kb on - strand at 1042.987 kb on - strand at 1042.988 kb on + strand at 1042.988 kb on + strand at 1042.989 kb on - strand at 1042.989 kb on - strand at 1042.989 kb on - strand at 1042.989 kb on - strand at 1043.001 kb on - strand at 1043.045 kb on + strand at 1043.046 kb on - strand at 1043.052 kb on + strand at 1043.052 kb on + strand at 1043.053 kb on - strand at 1043.053 kb on - strand at 1043.053 kb on - strand at 1043.056 kb on - strand at 1043.056 kb on - strand at 1043.090 kb on + strand at 1043.091 kb on - strand at 1043.102 kb on - strand at 1043.134 kb on + strand at 1043.154 kb on + strand at 1043.157 kb on - strand at 1043.157 kb on - strand at 1043.248 kb on - strand at 1043.248 kb on - strand at 1043.298 kb on + strand at 1043.299 kb on - strand at 1043.312 kb on + strand at 1043.313 kb on - strand at 1043.319 kb on + strand at 1043.337 kb on + strand at 1043.337 kb on + strand at 1043.798 kb on + strand at 1043.799 kb on - strand at 1043.799 kb on - strand at 1043.817 kb on + strand at 1043.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 1,039,914 - +0.6 1,039,979 + -1.4 1,039,983 + -1.6 1,039,983 + +0.8 1,040,017 + -0.9 1,040,018 - -0.3 1,040,018 - +0.2 1,040,028 + -0.3 1,040,033 + -0.0 1,040,033 + -1.4 1,040,033 + +0.7 1,040,034 - -0.3 1,040,125 + CA264_04505 0.14 -0.2 1,040,126 - CA264_04505 0.14 -0.1 1,040,129 + CA264_04505 0.14 -1.2 1,040,129 + CA264_04505 0.14 -0.2 1,040,129 + CA264_04505 0.14 +0.1 1,040,130 - CA264_04505 0.14 +0.5 1,040,130 - CA264_04505 0.14 +0.1 1,040,220 - CA264_04505 0.26 +0.8 1,040,240 - CA264_04505 0.28 -0.3 1,040,246 - CA264_04505 0.29 -0.2 1,040,246 - CA264_04505 0.29 +0.9 1,040,246 - CA264_04505 0.29 +0.4 1,040,257 - CA264_04505 0.31 -1.2 1,040,310 - CA264_04505 0.37 +0.8 1,040,339 + CA264_04505 0.41 -1.0 1,040,340 - CA264_04505 0.41 +0.6 1,040,340 - CA264_04505 0.41 -0.1 1,040,406 - CA264_04505 0.50 -0.3 1,040,488 + CA264_04505 0.60 +0.5 1,040,497 + CA264_04505 0.61 -0.1 1,040,498 - CA264_04505 0.62 +0.8 1,040,524 + CA264_04505 0.65 -0.9 1,040,548 + CA264_04505 0.68 +0.1 1,040,571 + CA264_04505 0.71 -1.0 1,040,572 - CA264_04505 0.71 -0.7 1,040,575 + CA264_04505 0.71 +0.2 1,040,603 - CA264_04505 0.75 -0.9 1,040,639 + CA264_04505 0.80 +0.4 1,040,639 + CA264_04505 0.80 -0.5 1,040,640 - CA264_04505 0.80 +0.5 1,040,640 - CA264_04505 0.80 -0.2 1,040,640 - CA264_04505 0.80 +0.1 1,040,756 - +1.1 1,040,756 - -1.3 1,040,758 - -1.6 1,040,758 - -1.2 1,040,820 - +0.7 1,042,854 + +1.9 1,042,987 - -0.7 1,042,987 - -1.2 1,042,988 + -1.6 1,042,988 + +0.5 1,042,989 - -0.7 1,042,989 - -0.0 1,042,989 - +0.3 1,042,989 - -0.5 1,043,001 - +2.8 1,043,045 + -0.9 1,043,046 - -0.6 1,043,052 + -0.4 1,043,052 + -0.2 1,043,053 - -0.8 1,043,053 - -0.6 1,043,053 - -2.1 1,043,056 - -0.2 1,043,056 - -0.8 1,043,090 + +1.0 1,043,091 - +0.2 1,043,102 - -1.1 1,043,134 + +0.3 1,043,154 + -0.2 1,043,157 - -0.4 1,043,157 - +1.1 1,043,248 - -0.0 1,043,248 - +0.6 1,043,298 + -0.2 1,043,299 - +0.6 1,043,312 + +0.0 1,043,313 - -0.1 1,043,319 + -0.2 1,043,337 + +2.0 1,043,337 + -0.1 1,043,798 + +0.1 1,043,799 - -0.3 1,043,799 - -0.1 1,043,817 + -1.0 1,043,818 - -0.5
Or see this region's nucleotide sequence