Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02095 and CA264_02100 are separated by 120 nucleotides CA264_02100 and CA264_02105 are separated by 119 nucleotides CA264_02105 and CA264_02110 are separated by 257 nucleotides
CA264_02095: CA264_02095 - AI-2E family transporter, at 483,248 to 484,306
_02095
CA264_02100: CA264_02100 - Clp protease ClpC, at 484,427 to 487,024
_02100
CA264_02105: CA264_02105 - hypothetical protein, at 487,144 to 487,746
_02105
CA264_02110: CA264_02110 - lauroyl acyltransferase, at 488,004 to 488,924
_02110
Position (kb) 484
485
486
487
488 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 483.567 kb on - strand, within CA264_02095 at 483.607 kb on - strand, within CA264_02095 at 483.675 kb on - strand, within CA264_02095 at 483.676 kb on + strand, within CA264_02095 at 483.677 kb on - strand, within CA264_02095 at 483.755 kb on - strand, within CA264_02095 at 483.755 kb on - strand, within CA264_02095 at 483.767 kb on + strand, within CA264_02095 at 483.768 kb on - strand, within CA264_02095 at 483.768 kb on - strand, within CA264_02095 at 483.811 kb on - strand, within CA264_02095 at 483.833 kb on + strand, within CA264_02095 at 483.834 kb on - strand, within CA264_02095 at 483.837 kb on - strand, within CA264_02095 at 483.844 kb on + strand, within CA264_02095 at 483.845 kb on - strand, within CA264_02095 at 483.846 kb on + strand, within CA264_02095 at 483.950 kb on - strand, within CA264_02095 at 483.951 kb on + strand, within CA264_02095 at 483.952 kb on - strand, within CA264_02095 at 483.952 kb on - strand, within CA264_02095 at 484.022 kb on + strand, within CA264_02095 at 484.023 kb on - strand, within CA264_02095 at 484.054 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.132 kb on + strand, within CA264_02095 at 484.305 kb on - strand at 484.319 kb on - strand at 484.414 kb on + strand at 484.415 kb on - strand at 484.421 kb on + strand at 484.422 kb on - strand at 487.027 kb on - strand at 487.027 kb on - strand at 487.028 kb on + strand at 487.029 kb on - strand at 487.031 kb on + strand at 487.031 kb on + strand at 487.031 kb on + strand at 487.032 kb on - strand at 487.033 kb on + strand at 487.034 kb on - strand at 487.042 kb on + strand at 487.110 kb on + strand at 487.179 kb on + strand at 487.228 kb on + strand, within CA264_02105 at 487.236 kb on + strand, within CA264_02105 at 487.236 kb on + strand, within CA264_02105 at 487.279 kb on + strand, within CA264_02105 at 487.279 kb on + strand, within CA264_02105 at 487.280 kb on - strand, within CA264_02105 at 487.369 kb on - strand, within CA264_02105 at 487.374 kb on - strand, within CA264_02105 at 487.374 kb on - strand, within CA264_02105 at 487.427 kb on + strand, within CA264_02105 at 487.442 kb on + strand, within CA264_02105 at 487.443 kb on - strand, within CA264_02105 at 487.463 kb on + strand, within CA264_02105 at 487.526 kb on + strand, within CA264_02105 at 487.526 kb on + strand, within CA264_02105 at 487.566 kb on + strand, within CA264_02105 at 487.600 kb on + strand, within CA264_02105 at 487.652 kb on + strand, within CA264_02105 at 487.724 kb on + strand at 487.724 kb on + strand at 487.781 kb on + strand at 487.781 kb on + strand at 487.784 kb on + strand at 487.864 kb on - strand at 487.868 kb on - strand at 487.922 kb on + strand at 487.947 kb on + strand at 487.978 kb on + strand at 487.978 kb on + strand at 487.979 kb on - strand at 488.023 kb on + strand at 488.024 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 483,567 - CA264_02095 0.30 -0.6 483,607 - CA264_02095 0.34 -1.7 483,675 - CA264_02095 0.40 -1.3 483,676 + CA264_02095 0.40 -1.1 483,677 - CA264_02095 0.41 +1.0 483,755 - CA264_02095 0.48 -1.2 483,755 - CA264_02095 0.48 -0.1 483,767 + CA264_02095 0.49 -0.6 483,768 - CA264_02095 0.49 -1.1 483,768 - CA264_02095 0.49 -2.3 483,811 - CA264_02095 0.53 -1.8 483,833 + CA264_02095 0.55 -2.3 483,834 - CA264_02095 0.55 -0.6 483,837 - CA264_02095 0.56 -0.9 483,844 + CA264_02095 0.56 -0.9 483,845 - CA264_02095 0.56 +0.9 483,846 + CA264_02095 0.56 -1.2 483,950 - CA264_02095 0.66 -0.3 483,951 + CA264_02095 0.66 -0.9 483,952 - CA264_02095 0.66 -0.3 483,952 - CA264_02095 0.66 +1.8 484,022 + CA264_02095 0.73 -0.6 484,023 - CA264_02095 0.73 -1.0 484,054 + CA264_02095 0.76 -0.3 484,132 + CA264_02095 0.83 -0.3 484,132 + CA264_02095 0.83 -0.0 484,132 + CA264_02095 0.83 -0.1 484,132 + CA264_02095 0.83 +0.6 484,132 + CA264_02095 0.83 -0.9 484,305 - +0.4 484,319 - -0.7 484,414 + -0.3 484,415 - -0.3 484,421 + -0.3 484,422 - -0.4 487,027 - -2.9 487,027 - -1.5 487,028 + -0.0 487,029 - -0.4 487,031 + -0.5 487,031 + -0.4 487,031 + -1.0 487,032 - +0.2 487,033 + +1.2 487,034 - +0.6 487,042 + -0.5 487,110 + -0.3 487,179 + +0.7 487,228 + CA264_02105 0.14 +1.8 487,236 + CA264_02105 0.15 -0.0 487,236 + CA264_02105 0.15 +0.9 487,279 + CA264_02105 0.22 +0.1 487,279 + CA264_02105 0.22 -1.1 487,280 - CA264_02105 0.23 -1.0 487,369 - CA264_02105 0.37 -1.7 487,374 - CA264_02105 0.38 -0.2 487,374 - CA264_02105 0.38 +0.2 487,427 + CA264_02105 0.47 +0.2 487,442 + CA264_02105 0.49 -0.2 487,443 - CA264_02105 0.50 -0.5 487,463 + CA264_02105 0.53 -0.1 487,526 + CA264_02105 0.63 -1.0 487,526 + CA264_02105 0.63 -0.0 487,566 + CA264_02105 0.70 +0.2 487,600 + CA264_02105 0.76 +0.6 487,652 + CA264_02105 0.84 +0.1 487,724 + +0.3 487,724 + +0.2 487,781 + -0.4 487,781 + +0.0 487,784 + -0.3 487,864 - +0.1 487,868 - -0.0 487,922 + +0.1 487,947 + +1.1 487,978 + +0.3 487,978 + +0.6 487,979 - +0.1 488,023 + -0.4 488,024 - -1.1
Or see this region's nucleotide sequence