Experiment: m.b. copper (II) chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01620 and CA264_01625 are separated by 196 nucleotides CA264_01625 and CA264_01630 are separated by 368 nucleotides
CA264_01620: CA264_01620 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase, at 380,031 to 380,924
_01620
CA264_01625: CA264_01625 - hypothetical protein, at 381,121 to 381,732
_01625
CA264_01630: CA264_01630 - TonB dependent receptor, at 382,101 to 384,557
_01630
Position (kb) 381
382 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 380.922 kb on + strand at 380.923 kb on - strand at 380.937 kb on + strand at 380.939 kb on + strand at 380.944 kb on - strand at 380.944 kb on - strand at 380.988 kb on - strand at 381.042 kb on - strand at 381.045 kb on + strand at 381.045 kb on + strand at 381.045 kb on + strand at 381.046 kb on - strand at 381.071 kb on - strand at 381.071 kb on - strand at 381.124 kb on + strand at 381.145 kb on - strand at 381.212 kb on + strand, within CA264_01625 at 381.212 kb on + strand, within CA264_01625 at 381.217 kb on + strand, within CA264_01625 at 381.218 kb on - strand, within CA264_01625 at 381.287 kb on - strand, within CA264_01625 at 381.357 kb on - strand, within CA264_01625 at 381.357 kb on - strand, within CA264_01625 at 381.378 kb on - strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.434 kb on + strand, within CA264_01625 at 381.435 kb on - strand, within CA264_01625 at 381.435 kb on - strand, within CA264_01625 at 381.438 kb on + strand, within CA264_01625 at 381.439 kb on - strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.440 kb on + strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.441 kb on - strand, within CA264_01625 at 381.461 kb on + strand, within CA264_01625 at 381.462 kb on - strand, within CA264_01625 at 381.462 kb on - strand, within CA264_01625 at 381.524 kb on - strand, within CA264_01625 at 381.616 kb on + strand, within CA264_01625 at 381.616 kb on + strand, within CA264_01625 at 381.617 kb on - strand, within CA264_01625 at 381.739 kb on + strand at 381.739 kb on + strand at 381.739 kb on + strand at 381.740 kb on - strand at 381.740 kb on - strand at 381.749 kb on + strand at 381.754 kb on + strand at 381.755 kb on - strand at 381.767 kb on - strand at 381.790 kb on - strand at 381.814 kb on + strand at 381.935 kb on + strand at 381.935 kb on + strand at 381.935 kb on + strand at 381.936 kb on - strand at 381.936 kb on - strand at 381.963 kb on - strand at 381.965 kb on + strand at 381.965 kb on + strand at 382.017 kb on + strand at 382.017 kb on + strand at 382.020 kb on + strand at 382.021 kb on - strand at 382.041 kb on + strand at 382.041 kb on + strand at 382.042 kb on - strand at 382.044 kb on - strand at 382.075 kb on + strand at 382.083 kb on + strand at 382.096 kb on - strand at 382.175 kb on + strand at 382.204 kb on + strand at 382.204 kb on + strand at 382.204 kb on + strand at 382.285 kb on + strand at 382.286 kb on - strand at 382.286 kb on - strand at 382.295 kb on + strand at 382.296 kb on - strand at 382.297 kb on + strand at 382.297 kb on + strand at 382.298 kb on - strand at 382.426 kb on + strand, within CA264_01630 at 382.441 kb on - strand, within CA264_01630 at 382.486 kb on + strand, within CA264_01630 at 382.487 kb on - strand, within CA264_01630 at 382.487 kb on - strand, within CA264_01630 at 382.490 kb on + strand, within CA264_01630 at 382.491 kb on - strand, within CA264_01630 at 382.492 kb on + strand, within CA264_01630 at 382.492 kb on + strand, within CA264_01630 at 382.493 kb on - strand, within CA264_01630 at 382.542 kb on + strand, within CA264_01630 at 382.543 kb on - strand, within CA264_01630 at 382.543 kb on - strand, within CA264_01630 at 382.543 kb on - strand, within CA264_01630
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 0.16 mM remove 380,922 + +0.6 380,923 - +1.0 380,937 + -0.2 380,939 + -0.7 380,944 - +0.1 380,944 - -0.2 380,988 - -0.8 381,042 - -0.1 381,045 + +1.0 381,045 + -0.3 381,045 + -1.2 381,046 - -0.4 381,071 - +1.0 381,071 - -2.1 381,124 + -0.2 381,145 - -0.5 381,212 + CA264_01625 0.15 -0.6 381,212 + CA264_01625 0.15 -0.6 381,217 + CA264_01625 0.16 +0.9 381,218 - CA264_01625 0.16 -0.6 381,287 - CA264_01625 0.27 +1.0 381,357 - CA264_01625 0.39 +0.0 381,357 - CA264_01625 0.39 -1.1 381,378 - CA264_01625 0.42 +1.0 381,434 + CA264_01625 0.51 -0.4 381,434 + CA264_01625 0.51 +0.5 381,434 + CA264_01625 0.51 -0.6 381,434 + CA264_01625 0.51 +0.0 381,435 - CA264_01625 0.51 +0.7 381,435 - CA264_01625 0.51 +0.4 381,438 + CA264_01625 0.52 -0.7 381,439 - CA264_01625 0.52 +0.3 381,440 + CA264_01625 0.52 +0.2 381,440 + CA264_01625 0.52 -0.8 381,440 + CA264_01625 0.52 -1.1 381,440 + CA264_01625 0.52 +0.2 381,441 - CA264_01625 0.52 +0.2 381,441 - CA264_01625 0.52 -0.1 381,441 - CA264_01625 0.52 +1.2 381,441 - CA264_01625 0.52 -0.1 381,461 + CA264_01625 0.56 -0.7 381,462 - CA264_01625 0.56 -1.0 381,462 - CA264_01625 0.56 -0.8 381,524 - CA264_01625 0.66 -0.2 381,616 + CA264_01625 0.81 +0.2 381,616 + CA264_01625 0.81 +0.3 381,617 - CA264_01625 0.81 -2.5 381,739 + -0.1 381,739 + -0.3 381,739 + +1.8 381,740 - +0.8 381,740 - -0.2 381,749 + -0.6 381,754 + -0.4 381,755 - +0.2 381,767 - +0.5 381,790 - -0.5 381,814 + -0.0 381,935 + -0.7 381,935 + +0.3 381,935 + -0.6 381,936 - -0.4 381,936 - -0.0 381,963 - +0.9 381,965 + -0.9 381,965 + -0.6 382,017 + +1.1 382,017 + -0.5 382,020 + -1.0 382,021 - +0.4 382,041 + -1.5 382,041 + -0.5 382,042 - +0.2 382,044 - -0.1 382,075 + +0.1 382,083 + -0.7 382,096 - -1.4 382,175 + +0.8 382,204 + -0.9 382,204 + +0.3 382,204 + -1.0 382,285 + -3.1 382,286 - -1.1 382,286 - -0.6 382,295 + +0.9 382,296 - +1.2 382,297 + +0.6 382,297 + -0.3 382,298 - -0.2 382,426 + CA264_01630 0.13 -0.0 382,441 - CA264_01630 0.14 +0.7 382,486 + CA264_01630 0.16 +0.4 382,487 - CA264_01630 0.16 -0.4 382,487 - CA264_01630 0.16 -0.0 382,490 + CA264_01630 0.16 -0.6 382,491 - CA264_01630 0.16 -0.3 382,492 + CA264_01630 0.16 -0.4 382,492 + CA264_01630 0.16 -1.1 382,493 - CA264_01630 0.16 +0.7 382,542 + CA264_01630 0.18 -0.2 382,543 - CA264_01630 0.18 +0.1 382,543 - CA264_01630 0.18 -0.8 382,543 - CA264_01630 0.18 +0.7
Or see this region's nucleotide sequence