Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_5098

Experiment: KB with Erythromycin 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 6.25 ug/ml
6,048,856	+				+0.0
6,048,856	+				-0.1
6,048,857	-				-0.6
6,048,857	-				+0.7
6,048,857	-				-1.5
6,048,857	-				+0.3
6,048,857	-				-2.7
6,048,857	-				-0.4
6,048,857	-				-0.9
6,048,857	-				+0.3
6,048,947	+		Psyr_5096	0.35	-0.7
6,048,948	-		Psyr_5096	0.36	-0.7
6,048,948	-		Psyr_5096	0.36	+0.1
6,048,953	+		Psyr_5096	0.38	+1.1
6,048,953	+		Psyr_5096	0.38	-1.0
6,048,954	-		Psyr_5096	0.39	-1.9
6,048,954	-		Psyr_5096	0.39	+0.4
6,048,954	-		Psyr_5096	0.39	-1.5
6,048,954	-		Psyr_5096	0.39	-2.9
6,049,183	+				+2.4
6,049,184	-				-1.9
6,049,184	-				+0.5
6,049,184	-				-0.7
6,049,218	+		Psyr_5097	0.10	-0.5
6,049,219	-		Psyr_5097	0.10	-0.6
6,049,239	-		Psyr_5097	0.14	-0.3
6,049,239	-		Psyr_5097	0.14	+1.5
6,049,337	+		Psyr_5097	0.34	-0.2
6,049,498	-		Psyr_5097	0.66	+0.3
6,049,543	+		Psyr_5097	0.76	+0.3
6,049,543	+		Psyr_5097	0.76	+0.3
6,049,543	+		Psyr_5097	0.76	-1.9
6,049,543	+		Psyr_5097	0.76	-1.5
6,049,543	+		Psyr_5097	0.76	+0.1
6,049,543	+		Psyr_5097	0.76	+0.1
6,049,543	+		Psyr_5097	0.76	+0.3
6,049,543	+		Psyr_5097	0.76	-1.5
6,049,543	+		Psyr_5097	0.76	+1.1
6,049,543	+		Psyr_5097	0.76	-0.5
6,049,543	+		Psyr_5097	0.76	-0.4
6,049,543	+		Psyr_5097	0.76	+0.1
6,049,543	+		Psyr_5097	0.76	+0.4
6,049,544	-		Psyr_5097	0.76	-0.3
6,049,544	-		Psyr_5097	0.76	+0.1
6,049,544	-		Psyr_5097	0.76	-2.8
6,049,544	-		Psyr_5097	0.76	+0.1
6,049,544	-		Psyr_5097	0.76	+0.5
6,049,544	-		Psyr_5097	0.76	-0.6
6,049,544	-		Psyr_5097	0.76	-0.9
6,049,544	-		Psyr_5097	0.76	-0.7
6,049,544	-		Psyr_5097	0.76	+1.1
6,049,544	-		Psyr_5097	0.76	-0.9
6,049,547	+		Psyr_5097	0.76	+0.4
6,049,547	+		Psyr_5097	0.76	+0.1
6,049,548	-		Psyr_5097	0.77	+0.6
6,049,548	-		Psyr_5097	0.77	-2.0
6,049,548	-		Psyr_5097	0.77	-0.3
6,049,567	+		Psyr_5097	0.80	-0.1
6,049,662	+				+0.2
6,049,662	+				+1.8
6,049,662	+				-0.2
6,049,662	+				-0.3
6,049,663	-				+0.1
6,049,663	-				-1.1
6,049,706	+				-0.4
6,049,706	+				+0.3
6,049,706	+				-0.6
6,049,706	+				-0.7
6,049,707	-				+0.4
6,049,707	-				-0.5
6,049,707	-				+0.4
6,049,707	-				-0.9
6,049,707	-				-0.7
6,049,707	-				+0.8
6,049,734	+				-3.0
6,049,735	-				+0.0
6,049,735	-				-1.0
6,049,804	+		Psyr_5098	0.14	-0.2
6,049,869	+		Psyr_5098	0.26	-1.1
6,049,869	+		Psyr_5098	0.26	-1.1
6,049,870	-		Psyr_5098	0.26	-0.5
6,049,870	-		Psyr_5098	0.26	-0.4
6,049,870	-		Psyr_5098	0.26	-0.6
6,049,870	-		Psyr_5098	0.26	+0.1
6,049,870	-		Psyr_5098	0.26	-0.0
6,049,870	-		Psyr_5098	0.26	-1.3
6,049,914	+		Psyr_5098	0.35	-0.0
6,049,915	-		Psyr_5098	0.35	+0.6
6,049,915	-		Psyr_5098	0.35	-0.4
6,049,978	+		Psyr_5098	0.47	-0.2
6,049,978	+		Psyr_5098	0.47	-2.1
6,049,979	-		Psyr_5098	0.47	-1.9
6,049,979	-		Psyr_5098	0.47	-0.3
6,049,979	-		Psyr_5098	0.47	-0.2
6,049,979	-		Psyr_5098	0.47	-0.4
6,050,074	-		Psyr_5098	0.66	+0.1
6,050,160	-		Psyr_5098	0.82	-1.2
6,050,160	-		Psyr_5098	0.82	-2.3
6,050,205	-				-0.3
6,050,214	-				+0.2
6,050,241	+				+0.2
6,050,278	+				-0.3
6,050,278	+				-1.5
6,050,278	+				+0.0
6,050,278	+				-1.4
6,050,278	+				-1.7
6,050,279	-				+1.1
6,050,279	-				+1.1
6,050,279	-				-2.3
6,050,323	+				+0.8
6,050,324	-				+0.1
6,050,357	+				+0.0
6,050,357	+				-2.0
6,050,358	-				-0.5
6,050,358	-				+0.3
6,050,389	+				-0.5
6,050,389	+				-1.6
6,050,389	+				-0.7
6,050,390	-				+0.9
6,050,390	-				-0.6
6,050,441	-				-1.5
6,050,476	-				-3.0
6,050,508	+				-0.0
6,050,508	+				-0.2
6,050,509	-				-0.4
6,050,509	-				-0.1
6,050,509	-				+0.7
6,050,509	-				-1.2
6,050,509	-				-0.3
6,050,509	-				-1.3
6,050,509	-				-0.6
6,050,512	+				+0.5
6,050,512	+				+0.1
6,050,513	-				+0.5
6,050,513	-				-0.7
6,050,513	-				+0.3
6,050,513	-				-0.3
6,050,513	-				+1.7
6,050,513	-				-1.5
6,050,521	+				-0.1
6,050,577	-				+0.7
6,050,661	+				-0.9
6,050,806	+		Psyr_5099	0.15	-1.7
6,050,807	-		Psyr_5099	0.15	+0.6
6,050,826	+		Psyr_5099	0.17	+0.5
6,050,836	-		Psyr_5099	0.17	-0.2
6,050,898	+		Psyr_5099	0.21	-1.5
6,050,898	+		Psyr_5099	0.21	-0.9
6,050,898	+		Psyr_5099	0.21	+0.9
6,050,898	+		Psyr_5099	0.21	-0.9
6,050,899	-		Psyr_5099	0.22	-0.1
6,050,899	-		Psyr_5099	0.22	+0.1
6,050,899	-		Psyr_5099	0.22	-1.9
6,050,947	+		Psyr_5099	0.25	-1.3
6,050,977	-		Psyr_5099	0.27	+0.4
6,050,999	+		Psyr_5099	0.28	-0.5
6,050,999	+		Psyr_5099	0.28	-0.3
6,050,999	+		Psyr_5099	0.28	-0.3
6,050,999	+		Psyr_5099	0.28	+0.7
6,051,000	-		Psyr_5099	0.29	+0.4
6,051,003	+		Psyr_5099	0.29	-0.6
6,051,003	+		Psyr_5099	0.29	-0.9
6,051,004	-		Psyr_5099	0.29	-0.3
6,051,004	-		Psyr_5099	0.29	-1.2
6,051,004	-		Psyr_5099	0.29	+0.6
6,051,004	-		Psyr_5099	0.29	+0.1
6,051,004	-		Psyr_5099	0.29	+0.5
6,051,004	-		Psyr_5099	0.29	-0.9
6,051,115	-		Psyr_5099	0.36	+0.0
6,051,162	+		Psyr_5099	0.40	+1.9
6,051,162	+		Psyr_5099	0.40	-0.7
6,051,163	-		Psyr_5099	0.40	-1.3
6,051,163	-		Psyr_5099	0.40	-0.9
6,051,184	-		Psyr_5099	0.41	+0.2