Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3295

Experiment: KB with Erythromycin 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 6.25 ug/ml
3,942,323	-		Psyr_3294	0.84	-0.5
3,942,477	+				-2.2
3,942,478	-				-0.0
3,942,662	+				-2.2
3,942,728	-				-0.7
3,942,728	-				-1.0
3,942,785	-				-0.2
3,942,789	+				+1.1
3,942,789	+				-1.0
3,942,789	+				-1.5
3,942,789	+				+0.2
3,942,789	+				-1.8
3,942,789	+				-0.2
3,942,790	-				-0.0
3,942,790	-				-0.2
3,942,790	-				+0.1
3,942,795	+				-0.7
3,942,925	-				-0.6
3,942,925	-				+0.8
3,942,928	-				+0.5
3,942,981	+				-0.3
3,942,981	+				-0.2
3,942,981	+				-1.2
3,942,982	-				+0.4
3,942,982	-				+0.1
3,942,982	-				-0.9
3,942,982	-				-0.7
3,942,982	-				-1.0
3,943,179	+		Psyr_3295	0.18	-0.1
3,943,179	+		Psyr_3295	0.18	+0.6
3,943,179	+		Psyr_3295	0.18	-1.0
3,943,180	-		Psyr_3295	0.18	-0.6
3,943,180	-		Psyr_3295	0.18	+0.0
3,943,407	+		Psyr_3295	0.30	-0.2
3,943,408	-		Psyr_3295	0.30	-0.2
3,943,408	-		Psyr_3295	0.30	+1.4
3,943,408	-		Psyr_3295	0.30	+0.8
3,943,408	-		Psyr_3295	0.30	-1.4
3,943,408	-		Psyr_3295	0.30	+1.0
3,943,408	-		Psyr_3295	0.30	-0.1
3,943,408	-		Psyr_3295	0.30	-0.6
3,943,408	-		Psyr_3295	0.30	-0.8
3,943,525	+		Psyr_3295	0.36	-1.8
3,943,614	+		Psyr_3295	0.41	-0.6
3,943,725	+		Psyr_3295	0.47	+0.8
3,943,726	-		Psyr_3295	0.47	+0.3
3,943,726	-		Psyr_3295	0.47	+1.2
3,943,807	-		Psyr_3295	0.51	-0.5
3,943,921	-		Psyr_3295	0.57	-0.7
3,943,921	-		Psyr_3295	0.57	+0.0
3,943,921	-		Psyr_3295	0.57	-0.5
3,944,038	+		Psyr_3295	0.63	-1.1
3,944,038	+		Psyr_3295	0.63	+0.5
3,944,038	+		Psyr_3295	0.63	-0.2
3,944,039	-		Psyr_3295	0.63	+0.4
3,944,172	+		Psyr_3295	0.70	+0.5
3,944,187	+		Psyr_3295	0.70	-0.0
3,944,187	+		Psyr_3295	0.70	+0.1
3,944,187	+		Psyr_3295	0.70	+1.3
3,944,188	-		Psyr_3295	0.71	+0.1
3,944,427	+		Psyr_3295	0.83	+0.2
3,944,427	+		Psyr_3295	0.83	-1.2
3,944,655	+				-0.4
3,944,655	+				+1.1
3,944,656	-				-0.1
3,944,656	-				+0.3
3,944,656	-				-0.6
3,944,660	-				-0.0
3,944,660	-				+0.0
3,944,660	-				-0.2
3,944,660	-				-0.4
3,944,668	+				+0.8
3,944,668	+				-0.2
3,944,668	+				+0.8
3,944,668	+				+2.1
3,944,668	+				+0.1
3,944,668	+				-1.2
3,944,669	-				+0.1
3,944,677	-				+0.9
3,944,688	+				+0.3
3,944,689	-				+1.1
3,945,048	-		Psyr_3296	0.29	+1.0
3,945,250	+		Psyr_3296	0.54	-0.4
3,945,250	+		Psyr_3296	0.54	-0.8
3,945,421	-		Psyr_3296	0.75	+0.9
3,945,618	+				+0.4
3,945,619	-				-0.5
3,945,619	-				-0.4
3,945,619	-				+0.2