Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_3173

Experiment: KB with Erythromycin 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 6.25 ug/ml
3,799,041	+		Psyr_3172	0.29	+0.8
3,799,042	-		Psyr_3172	0.29	-1.5
3,799,042	-		Psyr_3172	0.29	+0.5
3,799,042	-		Psyr_3172	0.29	+1.8
3,799,042	-		Psyr_3172	0.29	-1.5
3,799,071	+		Psyr_3172	0.32	+0.2
3,799,071	+		Psyr_3172	0.32	-1.4
3,799,155	+		Psyr_3172	0.40	-0.2
3,799,155	+		Psyr_3172	0.40	+0.7
3,799,155	+		Psyr_3172	0.40	-1.2
3,799,156	-		Psyr_3172	0.41	+1.1
3,799,567	+		Psyr_3172	0.82	+0.0
3,799,720	+				-2.0
3,799,721	-				+0.3
3,799,721	-				-0.0
3,799,781	+				-0.1
3,799,824	-				+0.8
3,799,824	-				-0.1
3,799,824	-				+0.8
3,799,824	-				-0.2
3,800,016	+		Psyr_3173	0.17	-0.2
3,800,016	+		Psyr_3173	0.17	-1.4
3,800,016	+		Psyr_3173	0.17	+1.2
3,800,016	+		Psyr_3173	0.17	-0.2
3,800,016	+		Psyr_3173	0.17	-1.2
3,800,017	-		Psyr_3173	0.17	+0.2
3,800,017	-		Psyr_3173	0.17	+0.9
3,800,017	-		Psyr_3173	0.17	+0.4
3,800,017	-		Psyr_3173	0.17	-0.6
3,800,054	+		Psyr_3173	0.21	+0.4
3,800,199	+		Psyr_3173	0.35	+0.4
3,800,200	-		Psyr_3173	0.35	-0.8
3,800,200	-		Psyr_3173	0.35	+0.8
3,800,200	-		Psyr_3173	0.35	-0.0
3,800,422	+		Psyr_3173	0.57	+0.2
3,800,422	+		Psyr_3173	0.57	+0.6
3,800,425	-		Psyr_3173	0.58	-0.7
3,800,457	+		Psyr_3173	0.61	-0.1
3,800,560	+		Psyr_3173	0.71	-0.2
3,800,560	+		Psyr_3173	0.71	-0.1
3,800,560	+		Psyr_3173	0.71	+0.5
3,800,561	-		Psyr_3173	0.71	-0.8
3,800,561	-		Psyr_3173	0.71	+0.2
3,800,561	-		Psyr_3173	0.71	-2.8
3,800,561	-		Psyr_3173	0.71	-1.9
3,800,561	-		Psyr_3173	0.71	-1.5
3,800,561	-		Psyr_3173	0.71	+1.4
3,800,561	-		Psyr_3173	0.71	+0.7
3,800,561	-		Psyr_3173	0.71	-1.1
3,800,561	-		Psyr_3173	0.71	-2.0
3,800,561	-		Psyr_3173	0.71	+1.0
3,800,561	-		Psyr_3173	0.71	-1.8
3,800,561	-		Psyr_3173	0.71	-0.5
3,800,598	+		Psyr_3173	0.75	+0.3
3,800,598	+		Psyr_3173	0.75	-0.0
3,800,599	-		Psyr_3173	0.75	-0.4
3,800,599	-		Psyr_3173	0.75	-1.0
3,800,599	-		Psyr_3173	0.75	-0.2
3,800,599	-		Psyr_3173	0.75	-0.7
3,800,599	-		Psyr_3173	0.75	-2.2
3,800,601	+		Psyr_3173	0.75	+1.1
3,800,601	+		Psyr_3173	0.75	-0.4
3,800,619	-		Psyr_3173	0.77	-0.4
3,800,674	-		Psyr_3173	0.83	+0.1
3,800,674	-		Psyr_3173	0.83	-0.3
3,800,727	+		Psyr_3173	0.88	-1.1
3,800,727	+		Psyr_3173	0.88	+0.3
3,800,727	+		Psyr_3173	0.88	-0.5
3,800,727	+		Psyr_3173	0.88	-0.3
3,800,727	+		Psyr_3173	0.88	-0.5
3,800,727	+		Psyr_3173	0.88	-1.5
3,800,730	+		Psyr_3173	0.88	-0.3
3,800,731	-		Psyr_3173	0.88	-0.8
3,800,849	+				-0.6
3,800,869	-				-1.0
3,801,148	-		Psyr_3174	0.18	+0.4
3,801,375	-		Psyr_3174	0.34	-2.0
3,801,553	-		Psyr_3174	0.47	+0.2
3,801,636	+		Psyr_3174	0.53	+0.3
3,801,637	-		Psyr_3174	0.53	+1.0