Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2626

Experiment: KB with Erythromycin 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Erythromycin 6.25 ug/ml
3,184,597	+		Psyr_2624	0.58	+1.5
3,184,597	+		Psyr_2624	0.58	+1.7
3,184,673	-		Psyr_2624	0.73	+1.1
3,184,799	+				+0.6
3,184,802	+				+0.5
3,184,970	+		Psyr_2625	0.21	-0.4
3,184,971	-		Psyr_2625	0.21	-0.7
3,184,978	+		Psyr_2625	0.22	-0.1
3,185,144	+		Psyr_2625	0.44	-0.9
3,185,144	+		Psyr_2625	0.44	-3.4
3,185,144	+		Psyr_2625	0.44	+0.1
3,185,149	-		Psyr_2625	0.45	-0.1
3,185,179	+		Psyr_2625	0.49	-2.3
3,185,244	-		Psyr_2625	0.58	-0.6
3,185,246	+		Psyr_2625	0.58	-2.4
3,185,247	-		Psyr_2625	0.58	-0.4
3,185,247	-		Psyr_2625	0.58	-0.5
3,185,247	-		Psyr_2625	0.58	+1.3
3,185,249	+		Psyr_2625	0.59	+0.4
3,185,249	+		Psyr_2625	0.59	-2.0
3,185,249	+		Psyr_2625	0.59	-0.1
3,185,249	+		Psyr_2625	0.59	+0.2
3,185,343	+		Psyr_2625	0.71	-0.7
3,185,347	+		Psyr_2625	0.72	+0.9
3,185,348	-		Psyr_2625	0.72	+0.5
3,185,348	-		Psyr_2625	0.72	+0.4
3,185,386	-		Psyr_2625	0.77	+0.0
3,185,542	+				-1.2
3,185,542	+				+2.2
3,185,542	+				-0.9
3,185,543	-				-0.7
3,185,543	-				+0.5
3,185,543	-				+0.3
3,185,543	-				-1.2
3,185,543	-				-0.7
3,185,571	-				-1.7
3,185,628	+				-0.1
3,185,629	-				+0.5
3,185,797	+		Psyr_2626	0.14	+0.9
3,185,899	+		Psyr_2626	0.20	+0.4
3,185,923	+		Psyr_2626	0.22	-0.6
3,185,924	-		Psyr_2626	0.22	-1.7
3,185,924	-		Psyr_2626	0.22	+0.5
3,186,271	+		Psyr_2626	0.44	+0.4
3,186,271	+		Psyr_2626	0.44	+0.1
3,186,272	-		Psyr_2626	0.44	-0.6
3,186,272	-		Psyr_2626	0.44	+0.9
3,186,633	+		Psyr_2626	0.68	-2.7
3,186,688	+		Psyr_2626	0.71	-0.1
3,186,688	+		Psyr_2626	0.71	-0.8
3,186,689	-		Psyr_2626	0.71	-0.0
3,186,689	-		Psyr_2626	0.71	+0.0
3,186,791	-		Psyr_2626	0.78	+0.5
3,186,791	-		Psyr_2626	0.78	-0.3
3,186,811	+		Psyr_2626	0.79	-0.5
3,186,826	+		Psyr_2626	0.80	-1.7
3,186,826	+		Psyr_2626	0.80	-0.2
3,186,826	+		Psyr_2626	0.80	+1.3
3,186,827	-		Psyr_2626	0.80	-0.7
3,186,894	+		Psyr_2626	0.84	-0.6
3,186,894	+		Psyr_2626	0.84	-0.1
3,186,894	+		Psyr_2626	0.84	-0.9
3,186,895	-		Psyr_2626	0.85	-0.4
3,186,895	-		Psyr_2626	0.85	+1.0
3,186,904	+		Psyr_2626	0.85	-0.3
3,186,905	-		Psyr_2626	0.85	+0.6
3,187,014	+				-0.7
3,187,014	+				+0.7
3,187,015	-				+1.1
3,187,015	-				-1.8
3,187,015	-				-0.1
3,187,120	+				-0.5
3,187,120	+				+0.4
3,187,125	-				-0.6
3,187,465	+		Psyr_2627	0.28	+1.4
3,187,465	+		Psyr_2627	0.28	+0.4
3,187,465	+		Psyr_2627	0.28	-0.7
3,187,465	+		Psyr_2627	0.28	+0.6
3,187,466	-		Psyr_2627	0.28	+0.6
3,187,466	-		Psyr_2627	0.28	-0.8
3,187,546	+		Psyr_2627	0.35	-0.4
3,187,641	-		Psyr_2627	0.42	+1.1
3,187,671	+		Psyr_2627	0.45	-1.2
3,187,672	-		Psyr_2627	0.45	-1.0
3,187,672	-		Psyr_2627	0.45	+0.4
3,187,750	+		Psyr_2627	0.51	+0.6